RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 HSP90AA1P07900 732 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 SCP2P22307 547 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 IRX3P78415 501 aaPredicted RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 FAM189BP81408 668 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 MKRN3Q13064 507 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 LAMC2Q13753 1193 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 CTTNQ14247 550 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 ASTE1Q2TB18 679 aaPredicted RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 E4F1Q66K89 784 aaPredicted RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 TSHZ1Q6ZSZ6 1077 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 FAM43BQ6ZT52 329 aaPredicted RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 GUF1Q8N442 669 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 SCFD2Q8WU76 684 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 HPS3Q969F9 1004 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 ZBTB10Q96DT7 871 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 CDHR1Q96JP9 859 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 PRDM10Q9NQV6 1147 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 DDX20Q9UHI6 824 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 AJAP1Q9UKB5 411 aaPredicted RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 SPDYE3A6NKU9 549 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 HMGCRP04035 888 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 TXKP42681 527 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 PSMC4P43686 418 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 PRKCEQ02156 737 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 GRM1Q13255 1194 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 NFRKBQ6P4R8 1299 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 RTN4RL1Q86UN2 441 aaPredicted RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 VSTM4Q8IW00 320 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 REXO1L1PQ8IX06 675 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 PDCD7Q8N8D1 485 aaKnown RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 ZNF516Q92618 1163 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 HVCN1Q96D96 273 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 NAP1L5Q96NT1 182 aaPredicted RBP5.52□□□□□ -1.53
RIF1-207ENST00000454583 PKMYT1Q99640 499 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 L2HGDHQ9H9P8 463 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 LRWD1Q9UFC0 647 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 GDAQ9Y2T3 454 aa5.52□□□□□ -1.53
RIF1-207ENST00000454583 SMIM35A0A1B0GVV1 85 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 H3BQV1 296 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 POTEB2H3BUK9 544 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 MYBP10242 640 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 PLS3P13797 630 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 HNRNPH3P31942 346 aaKnown RBP5.51□□□□□ -1.53
RIF1-207ENST00000454583 SYKP43405 635 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 FCGRTP55899 365 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 ATP2B2Q01814 1243 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 MCL1Q07820 350 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 NEDD9Q14511 834 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 LRRC41Q15345 812 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 CAMK4Q16566 473 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 EDRF1Q3B7T1 1238 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 IFFO2Q5TF58 517 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 ANKRD40Q6AI12 368 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 GDF6Q6KF10 455 aaPredicted RBP5.51□□□□□ -1.53
RIF1-207ENST00000454583 MRPL10Q7Z7H8 261 aaKnown RBP5.51□□□□□ -1.53
RIF1-207ENST00000454583 CKAP2LQ8IYA6 745 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 SLAIN1Q8ND83 568 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 LMBR1Q8WVP7 490 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 NT5C3AQ9H0P0 336 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 WNT8AQ9H1J5 351 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 HOMER2Q9NSB8 354 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 SQORQ9Y6N5 450 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 UNC80Q8N2C7 3258 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 C5orf42Q9H799 3197 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 BHMG1C9JSJ3 638 aaPredicted RBP5.51□□□□□ -1.53
RIF1-207ENST00000454583 LCA5LO95447 670 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 CYP2C19P33261 490 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 RPL34P49207 117 aaKnown RBP5.51□□□□□ -1.53
RIF1-207ENST00000454583 SNRPFP62306 86 aaKnown RBP5.51□□□□□ -1.53
RIF1-207ENST00000454583 NCAPG2Q86XI2 1143 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 TRIM50Q86XT4 487 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 TRIM59Q8IWR1 403 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 TC2NQ8N9U0 490 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 FBXL5Q9UKA1 691 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 KIAA1024Q9UPX6 916 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 USP27XA6NNY8 438 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 TULP1O00294 542 aaPredicted RBP5.51□□□□□ -1.53
RIF1-207ENST00000454583 GGPS1O95749 300 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 RFC5P40937 340 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 GJA8P48165 433 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 AARSP49588 968 aaKnown RBP eCLIP5.51□□□□□ -1.53
RIF1-207ENST00000454583 GPC3P51654 580 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 CCNA1P78396 465 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 SYCP1Q15431 976 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 PLA2G4FQ68DD2 849 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 SLC39A7Q92504 469 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 GANQ9H2C0 597 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 ZSWIM4Q9H7M6 989 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 CEP72Q9P209 647 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 TBX21Q9UL17 535 aa5.51□□□□□ -1.53
RIF1-207ENST00000454583 PHLPP2Q6ZVD8 1323 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 ANKRD63C9JTQ0 380 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 DNM1LO00429 736 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 FKTNO75072 461 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 CAND2O75155 1236 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 GABBR2O75899 941 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 GH1P01241 217 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 SMIM10L2AP0DMW4 78 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 SMIM10L2BP0DMW5 78 aa5.5□□□□□ -1.53
RIF1-207ENST00000454583 RGS19P49795 217 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms