RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 BCL7CQ8WUZ0 217 aaPredicted RBP14.13□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 NELL1Q92832 810 aa14.13□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 BORCS6Q96GS4 357 aa14.13□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 EPS15L1Q9UBC2 864 aa14.13□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ZMIZ1Q9ULJ6 1067 aa14.13□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 PCDHGA10Q9Y5H3 936 aa14.13□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 IRAK3Q9Y616 596 aa14.13□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 IGF2RP11717 2491 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 KLRF2D3W0D1 207 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 GPR182O15218 404 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 TBC1D4O60343 1298 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 CLCN4P51793 760 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 SNW1Q13573 536 aaKnown RBP14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 KIAA0319LQ8IZA0 1049 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ABI1Q8IZP0 508 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ENAHQ8N8S7 591 aaPredicted RBP14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ESR2Q92731 530 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 TMEM169Q96HH4 297 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 PIGSQ96S52 555 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 RPP25Q9BUL9 199 aaKnown RBP14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 TMUB1Q9BVT8 246 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 BCO2Q9BYV7 579 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 GMEB2Q9UKD1 530 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 PATJQ8NI35 1801 aa14.12□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 GCN1Q92616 2671 aaKnown RBP14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 LAMA4Q16363 1823 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 C1QTNF9BB2RNN3 333 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 FLNBO75369 2602 aaKnown RBP14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 C1QTNF9P0C862 333 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 KLRC1P26715 233 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 GPC5P78333 572 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 SHC2P98077 582 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 BMS1Q14692 1282 aaKnown RBP14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 KIZQ2M2Z5 673 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 PCNX4Q63HM2 1172 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 C15orf39Q6ZRI6 1047 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 NLRX1Q86UT6 975 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 GIMAP8Q8ND71 665 aaPredicted RBP14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 HELQQ8TDG4 1101 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 KLHL5Q96PQ7 755 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 OSMRQ99650 979 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 VN1R3Q9BXE9 311 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 WDR6Q9NNW5 1121 aaKnown RBP14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 SLC2A4RGQ9NR83 387 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 DOCK8Q8NF50 2099 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 MIA3Q5JRA6 1907 aa14.11□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 KANSL1LA0AUZ9 987 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 SOBPA7XYQ1 873 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 HOXA2O43364 376 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ZIC2O95409 532 aaPredicted RBP14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ITGB5P18084 799 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 CD72P21854 359 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 KLRC2P26717 231 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ALDH7A1P49419 539 aaKnown RBP14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 UBXN2BQ14CS0 331 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ECHDC2Q86YB7 292 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 FAM227BQ96M60 508 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ZSCAN10Q96SZ4 725 aaPredicted RBP14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 MAD2L2Q9UI95 211 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 PCDHGA4Q9Y5G9 962 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 NUMBLQ9Y6R0 609 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 CLUHO75153 1309 aa14.1□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 A0A0D9SFI3 127 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 CCDC195A0A1B0GUA6 201 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 FAM170BA6NMN3 283 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ANHXE9PGG2 379 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 SSBP05455 408 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 CNPP09543 421 aaKnown RBP14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 HTR4Q13639 388 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 GIT2Q14161 759 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 TSR1Q2NL82 804 aaKnown RBP14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 USP17L6PQ6QN14 398 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 DDX53Q86TM3 631 aaKnown RBP14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ZNF589Q86UQ0 364 aaPredicted RBP14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 PPFIBP1Q86W92 1011 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 NXPE3Q969Y0 559 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 DDX23Q9BUQ8 820 aaKnown RBP14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 BAZ2BQ9UIF8 2168 aaKnown RBP14.09□□□□□ -0.15
SMAD9-IT1-201ENST00000437983 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 RFPL2O75678 378 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PCP11498 1178 aaKnown RBP14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 LAMP2P13473 410 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 CRYBB1P53674 252 aaPredicted RBP14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ODR4Q5SWX8 454 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 TYW1BQ6NUM6 668 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PRR23CQ6ZRP0 262 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 IQCA1Q86XH1 822 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 GPRASP2Q96D09 838 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 IGSF21Q96ID5 467 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SHDQ96IW2 340 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 AZI2Q9H6S1 392 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MAN1C1Q9NR34 630 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 HELLSQ9NRZ9 838 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SEMA4GQ9NTN9 838 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 TTC41PQ6P2S7 1318 aa14.08□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 B4E1Z4 1266 aa14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 CYTH3O43739 400 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms