RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 ITGB1P05556 798 aa22.56■■□□□ 1.2
LMBR1-208ENST00000434278 SFPQP23246 707 aaKnown RBP eCLIP22.56■■□□□ 1.2
LMBR1-208ENST00000434278 DNAJB1P25685 340 aa22.56■■□□□ 1.2
LMBR1-208ENST00000434278 TTC38Q5R3I4 469 aa22.56■■□□□ 1.2
LMBR1-208ENST00000434278 SPPL3Q8TCT6 385 aa22.56■■□□□ 1.2
LMBR1-208ENST00000434278 TMX3Q96JJ7 454 aa22.56■■□□□ 1.2
LMBR1-208ENST00000434278 INO80BQ9C086 356 aaPredicted RBP22.56■■□□□ 1.2
LMBR1-208ENST00000434278 NSUN3Q9H649 340 aaKnown RBP22.56■■□□□ 1.2
LMBR1-208ENST00000434278 UBE2ZQ9H832 354 aaPredicted RBP22.56■■□□□ 1.2
LMBR1-208ENST00000434278 XPNPEP1Q9NQW7 623 aa22.56■■□□□ 1.2
LMBR1-208ENST00000434278 TYW1Q9NV66 732 aaKnown RBP22.56■■□□□ 1.2
LMBR1-208ENST00000434278 TCF20Q9UGU0 1960 aaKnown RBP22.56■■□□□ 1.2
LMBR1-208ENST00000434278 A0A087WWV3 80 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 A0A0U1RQF3 1178 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 CSPG5O95196 566 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 SPATA31C1P0DKV0 1188 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 LAMTOR4Q0VGL1 99 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 GNL2Q13823 731 aaKnown RBP22.55■■□□□ 1.2
LMBR1-208ENST00000434278 NAALADL2Q58DX5 795 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 ZNF598Q86UK7 904 aaKnown RBP22.55■■□□□ 1.2
LMBR1-208ENST00000434278 IL27Q8NEV9 243 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 PSPC1Q8WXF1 523 aaKnown RBP22.55■■□□□ 1.2
LMBR1-208ENST00000434278 TBC1D32Q96NH3 1257 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 CASD1Q96PB1 797 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 TMEM117Q9H0C3 514 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 CWH43Q9H720 699 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 CHST12Q9NRB3 414 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 ANKEF1Q9NU02 776 aa22.55■■□□□ 1.2
LMBR1-208ENST00000434278 OR52Z1P0C646 297 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 SRGAP2CP0DJJ0 459 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 ATF7P17544 494 aaPredicted RBP22.54■■□□□ 1.2
LMBR1-208ENST00000434278 U2AF2P26368 475 aaKnown RBP eCLIP22.54■■□□□ 1.27e-7■■■■□ 20.4
LMBR1-208ENST00000434278 TECP42680 631 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 ORC2Q13416 577 aaPredicted RBP22.54■■□□□ 1.2
LMBR1-208ENST00000434278 NBR1Q14596 966 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 SPOUT1Q5T280 376 aaKnown RBP22.54■■□□□ 1.2
LMBR1-208ENST00000434278 LRRC55Q6ZSA7 311 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 FERMT3Q86UX7 667 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 RNF169Q8NCN4 708 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 TCP11Q8WWU5 503 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 MTRQ99707 1265 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 DACT1Q9NYF0 836 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 MYO7AQ13402 2215 aa22.54■■□□□ 1.2
LMBR1-208ENST00000434278 BRWD1Q9NSI6 2320 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 TTC28Q96AY4 2481 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 GAS2O43903 313 aaKnown RBP22.53■■□□□ 1.2
LMBR1-208ENST00000434278 TRAPPC10P48553 1259 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 CLLU1OSQ5K130 101 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 CATSPER4Q7RTX7 472 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 CATSPER3Q86XQ3 398 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 C4orf32Q8N8J7 132 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 PIGOQ8TEQ8 1089 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 POF1BQ8WVV4 589 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 NECAB3Q96P71 396 aaPredicted RBP22.53■■□□□ 1.2
LMBR1-208ENST00000434278 UHRF1Q96T88 793 aaPredicted RBP22.53■■□□□ 1.2
LMBR1-208ENST00000434278 MINDY3Q9H8M7 445 aa22.53■■□□□ 1.2
LMBR1-208ENST00000434278 PIN4Q9Y237 131 aaKnown RBP22.53■■□□□ 1.2
LMBR1-208ENST00000434278 PLXNA4Q9HCM2 1894 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 HOXA2O43364 376 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 MED24O75448 989 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 EOMESO95936 686 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 KCNA5P22460 613 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 PHKA2P46019 1235 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 RARRES1P49788 294 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 TOB1P50616 345 aaPredicted RBP22.52■■□□□ 1.2
LMBR1-208ENST00000434278 COL19A1Q14993 1142 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 SRGAP1Q7Z6B7 1085 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 COLGALT1Q8NBJ5 622 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 TRAIPQ9BWF2 469 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 NOL7Q9UMY1 257 aaKnown RBP22.52■■□□□ 1.2
LMBR1-208ENST00000434278 PCDHB12Q9Y5F1 795 aa22.52■■□□□ 1.2
LMBR1-208ENST00000434278 ASAP2O43150 1006 aa22.51■■□□□ 1.19
LMBR1-208ENST00000434278 DGAT1O75907 488 aa22.51■■□□□ 1.19
LMBR1-208ENST00000434278 XRCC6P12956 609 aaKnown RBP eCLIP22.51■■□□□ 1.19
LMBR1-208ENST00000434278 IRS1P35568 1242 aa22.51■■□□□ 1.19
LMBR1-208ENST00000434278 TWF2Q6IBS0 349 aaKnown RBP22.51■■□□□ 1.19
LMBR1-208ENST00000434278 RNF149Q8NC42 400 aa22.51■■□□□ 1.19
LMBR1-208ENST00000434278 HELQQ8TDG4 1101 aa22.51■■□□□ 1.19
LMBR1-208ENST00000434278 TUFT1Q9NNX1 390 aa22.51■■□□□ 1.19
LMBR1-208ENST00000434278 AAASQ9NRG9 546 aa22.51■■□□□ 1.19
LMBR1-208ENST00000434278 TNFRSF10AO00220 468 aa22.5■■□□□ 1.19
LMBR1-208ENST00000434278 HYAL1Q12794 435 aa22.5■■□□□ 1.19
LMBR1-208ENST00000434278 LEXMQ3ZCV2 418 aa22.5■■□□□ 1.19
LMBR1-208ENST00000434278 ABI1Q8IZP0 508 aa22.5■■□□□ 1.19
LMBR1-208ENST00000434278 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.5■■□□□ 1.19
LMBR1-208ENST00000434278 ASAP3Q8TDY4 903 aa22.5■■□□□ 1.19
LMBR1-208ENST00000434278 PABPC5Q96DU9 382 aaKnown RBP22.5■■□□□ 1.19
LMBR1-208ENST00000434278 CCDC43Q96MW1 224 aaKnown RBP22.5■■□□□ 1.19
LMBR1-208ENST00000434278 POLR3CQ9BUI4 534 aaPredicted RBP22.5■■□□□ 1.19
LMBR1-208ENST00000434278 AGPAT5Q9NUQ2 364 aa22.5■■□□□ 1.19
LMBR1-208ENST00000434278 PCDHB6Q9Y5E3 794 aa22.5■■□□□ 1.19
LMBR1-208ENST00000434278 FGF18O76093 207 aa22.49■■□□□ 1.19
LMBR1-208ENST00000434278 LAG3P18627 525 aa22.49■■□□□ 1.19
LMBR1-208ENST00000434278 GJB2P29033 226 aa22.49■■□□□ 1.19
LMBR1-208ENST00000434278 GTF2F1P35269 517 aaKnown RBP eCLIP22.49■■□□□ 1.191e-6■□□□□ 8.3
LMBR1-208ENST00000434278 ARL2P36404 184 aa22.49■■□□□ 1.19
LMBR1-208ENST00000434278 LONRF3Q496Y0 759 aa22.49■■□□□ 1.19
LMBR1-208ENST00000434278 LRRC43Q8N309 656 aa22.49■■□□□ 1.19
LMBR1-208ENST00000434278 LPPQ93052 612 aa22.49■■□□□ 1.19
LMBR1-208ENST00000434278 FAM105AQ9NUU6 356 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms