RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 RSRC2Q7L4I2 434 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 C2CD5Q86YS7 1000 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 GCOM2Q9BZD3 368 aaPredicted RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TFCP2L1Q9NZI6 479 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 ZNRF3Q9ULT6 936 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SLC45A1Q9Y2W3 748 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 NFASCO94856 1347 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 KBTBD13C9JR72 458 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 H3BQF6 201 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SLC22A2O15244 555 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SUN1O94901 812 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 HADHQ16836 314 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 BATF3Q9NR55 127 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PAEPP09466 180 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TBX2Q13207 712 aaPredicted RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 KCTD2Q14681 263 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 TRADDQ15628 312 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 NAB2Q15742 525 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 LETM2Q2VYF4 491 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 MIS18BP1Q6P0N0 1132 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PDXDC2PQ6P474 469 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 FBXO38Q6PIJ6 1188 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 KRT27Q7Z3Y8 459 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 GIMAP7Q8NHV1 300 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 STON2Q8WXE9 905 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 FNBP1Q96RU3 617 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SMARCAL1Q9NZC9 954 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 SNX12Q9UMY4 172 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 PCDHB2Q9Y5E7 798 aa4.05□□□□□ -1.76
SHPRH-205ENST00000433355 MROH7Q68CQ1 1323 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ENO4A6NNW6 628 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FBXO21O94952 628 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ARHGAP4P98171 946 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 IL9RQ01113 521 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MAPRE1Q15691 268 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 XKR3Q5GH77 459 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CRELD2Q6UXH1 353 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MMS22LQ6ZRQ5 1243 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 RSPH3Q86UC2 560 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FAR2Q96K12 515 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ARID3AQ99856 593 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 AP3M1Q9Y2T2 418 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 LTBP4Q8N2S1 1624 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MTA2O94776 668 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 SSBP05455 408 aaKnown RBP eCLIP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FDPSP14324 419 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 RWDD2BP57060 319 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 TGFB2P61812 414 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CCZ1BP86790 482 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CCZ1P86791 482 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 LONRF2Q1L5Z9 754 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 C10orf62Q5T681 223 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 TEDDM1Q5T9Z0 273 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MFSD5Q6N075 450 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ARMCX2Q7L311 632 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 BICD1Q96G01 975 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 WHRNQ9P202 907 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MYO1FO00160 1098 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MX2P20592 715 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CDC27P30260 824 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CCDC62Q6P9F0 684 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FAM186BQ8IYM0 893 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CACNA2D3Q8IZS8 1091 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 SRBD1Q8N5C6 995 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 IVNS1ABPQ9Y6Y0 642 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 P4HBP07237 508 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 TKTP29401 623 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 PPARGP37231 505 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 GRIN1Q05586 938 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CMTR1Q8N1G2 835 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 HELBQ8NG08 1087 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 RIN3Q8TB24 985 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MMADHCQ9H3L0 296 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 SPC25Q9HBM1 224 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 TMEM45AQ9NWC5 275 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ZSWIM5Q9P217 1185 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 IPO11Q9UI26 975 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 KPNA6O60684 536 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 SERPINB2P05120 415 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MCCD1P59942 119 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 TIMM10P62072 90 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ALKBH5Q6P6C2 394 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FKBP9P1Q75LS8 142 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 LMNTD2Q8IXW0 634 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 GJD4Q96KN9 370 aaPredicted RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 CCDC114Q96M63 670 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 ACAD9Q9H845 621 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MRM3Q9HC36 420 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 NCOA5Q9HCD5 579 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 USP20Q9Y2K6 914 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 RIOK3O14730 519 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FUT2Q10981 343 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 SMARCB1Q12824 385 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 STAT4Q14765 748 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 STOX1Q6ZVD7 989 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 METTL3Q86U44 580 aaKnown RBP4.04□□□□□ -1.76
SHPRH-205ENST00000433355 FBXW7Q969H0 707 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 MTBPQ96DY7 904 aa4.04□□□□□ -1.76
SHPRH-205ENST00000433355 VAT1Q99536 393 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms