RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FGFR1OP2Q9NVK5 253 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 ANGPTL2Q9UKU9 493 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 CAPN11Q9UMQ6 739 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 DOLKQ9UPQ8 538 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 MROH7-TTC4A0A0A0MT08 1334 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 PRPF3O43395 683 aaKnown RBP9.55□□□□□ -0.88
CTNND1-208ENST00000428599 RALAP11233 206 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 IFNAR1P17181 557 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 GCKP35557 465 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 NR5A1Q13285 461 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 R3HDM1Q15032 1099 aaKnown RBP9.55□□□□□ -0.88
CTNND1-208ENST00000428599 THEMIS2Q5TEJ8 643 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 MYRIPQ8NFW9 859 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 OR9Q1Q8NGQ5 310 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 EGFL8Q99944 293 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 SPATA31A5Q5VU36 1347 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 SPATA31A7Q8IWB4 1347 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 CPB1P15086 417 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 HOXA13P31271 388 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-208ENST00000428599 CASP14P31944 242 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 LIFRP42702 1097 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF445P59923 1031 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 GTF2H3Q13889 308 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 PPP6R3Q5H9R7 873 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-208ENST00000428599 PPP4R3CPQ6ZMV5 832 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 BARGINQ6ZT62 677 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 RAET1EQ8TD07 263 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 RMDN2Q96LZ7 410 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 ATP8A1Q9Y2Q0 1164 aa9.55□□□□□ -0.88
CTNND1-208ENST00000428599 PTPRUQ92729 1446 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 KPNA7A9QM74 516 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 CLDN3O15551 220 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 GPC3P51654 580 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 EPHB4P54760 987 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 FLOT2Q14254 428 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 MEI1Q5TIA1 1274 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 APOBEC3FQ8IUX4 373 aaKnown RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 YIPF2Q9BWQ6 316 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ASPSCR1Q9BZE9 553 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 FEM1BQ9UK73 627 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 STAP1Q9ULZ2 295 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF263O14978 683 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 KRT37O76014 449 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 COPB2P35606 906 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 RRM2BQ7LG56 351 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 STX19Q8N4C7 294 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 MCPH1Q8NEM0 835 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 NAF1Q96HR8 494 aaKnown RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 TSSK1BQ9BXA7 367 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 CNOT10Q9H9A5 744 aaKnown RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 SARS2Q9NP81 518 aaKnown RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 KIF17Q9P2E2 1029 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 RNF14Q9UBS8 474 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 CPS1P31327 1500 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 FRMPD1Q5SYB0 1578 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 GOLGA8IPA6NC78 632 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 GOLGA8JA6NMD2 632 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 SERPING1P05155 500 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ATICP31939 592 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 SLC39A14Q15043 492 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 NECTIN1Q15223 517 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ZKSCAN8Q15776 578 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 PGBD3Q8N328 593 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 MMP19Q99542 508 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 C2orf40Q9H1Z8 148 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 SENP1Q9P0U3 644 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 PCDHB8Q9UN66 801 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ZHX2Q9Y6X8 837 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 PREX1Q8TCU6 1659 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 A0A0G2JLW4 131 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 KIF28PB7ZC32 967 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 DNAJC6O75061 913 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 MAP2K2P36507 400 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 VCPP55072 806 aaKnown RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 KIF23Q02241 960 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 DEUP1Q05D60 604 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 TFDP2Q14188 446 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 CTTNQ14247 550 aaKnown RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 TRIP13Q15645 432 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF699Q32M78 642 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 DDX53Q86TM3 631 aaKnown RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 CRLF3Q8IUI8 442 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 TEX2Q8IWB9 1127 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 TAGAPQ8N103 731 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 MB21D1Q8N884 522 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 FAM96AQ9H5X1 160 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 PLEKHA8P1O95397 391 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ALDH1A1P00352 501 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 RWDD2BP57060 319 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ST8SIA6P61647 398 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 AP3B2Q13367 1082 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF568Q3ZCX4 644 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 ACAD11Q709F0 780 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 DGKHQ86XP1 1220 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 MORC4Q8TE76 937 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 MAML1Q92585 1016 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 GCOM2Q9BZD3 368 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-208ENST00000428599 CASS4Q9NQ75 786 aa9.54□□□□□ -0.88
CTNND1-208ENST00000428599 NEDD4P46934 1319 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms