RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 STAT1P42224 750 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 NR5A1Q13285 461 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 RASGRF1Q13972 1273 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SBK1Q52WX2 424 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 CAVIN4Q5BKX8 364 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 RABGAP1LQ5R372 815 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 AGBL2Q5U5Z8 902 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 MSL3Q8N5Y2 521 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 CATSPER2Q96P56 530 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 CCDC68Q9H2F9 335 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SMYD3Q9H7B4 428 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 ADD3Q9UEY8 706 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 FRMD4BQ9Y2L6 1034 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 GDAQ9Y2T3 454 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 GHRP10912 638 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 KRT10P13645 584 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 MARK3P27448 753 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 EEF1DP29692 281 aaKnown RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ALDH5A1P51649 535 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 RCN1Q15293 331 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 KCTD21Q4G0X4 260 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 HERC4Q5GLZ8 1057 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ZNF658Q5TYW1 1059 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 RGS9BPQ6ZS82 235 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 CTAGE3PQ8IX95 158 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ZNF444Q8N0Y2 327 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TMCO5AQ8N6Q1 288 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 LZICQ8WZA0 190 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TYW1Q9NV66 732 aaKnown RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TUBE1Q9UJT0 475 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 PCDHB6Q9Y5E3 794 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 WDR90Q96KV7 1748 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 EME2A4GXA9 379 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 RASA4BC9J798 803 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 CAPN9O14815 690 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 RASA4O43374 803 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ATP9AO75110 1047 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ZWINTO95229 277 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 FGAP02671 866 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ATP6V1B1P15313 513 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 RPL13P26373 211 aaKnown RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 PGM1P36871 562 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 HSD17B3P37058 310 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 GJA8P48165 433 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 NOVP48745 357 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 EPHB1P54762 984 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 GSTO1P78417 241 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 GPSM2P81274 684 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 EN1Q05925 392 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 SPARCL1Q14515 664 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ILDR1Q86SU0 546 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 MTMR14Q8NCE2 650 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TBC1D16Q8TBP0 767 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 HDAC7Q8WUI4 952 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 LRGUKQ96M69 825 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TSNARE1Q96NA8 513 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 EYA3Q99504 573 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 NDNQ99608 321 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 IFT122Q9HBG6 1241 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 GPBP1L1Q9HC44 474 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 FAM53CQ9NYF3 392 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 BTBD7Q9P203 1132 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TRIM49BA6NDI0 452 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TSPY3P0CV98 308 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TSPY8P0CW00 308 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TXKP42681 527 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 NAPAP54920 295 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ADARP55265 1226 aaKnown RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TSPY1Q01534 308 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 GFPT1Q06210 699 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 NCAPHQ15003 741 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 KLC3Q6P597 504 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ANO5Q75V66 913 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ERICH1Q86X53 443 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ICA1LQ8NDH6 482 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 SLC26A7Q8TE54 656 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 GRAMD1AQ96CP6 724 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 ANKRD27Q96NW4 1050 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 TRIM55Q9BYV6 548 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 UNC45AQ9H3U1 944 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 PANK4Q9NVE7 773 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 PPARGC1AQ9UBK2 798 aaKnown RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 DBR1Q9UK59 544 aaKnown RBP6.28□□□□□ -1.4
HDAC9-203ENST00000406072 COL4A5P29400 1685 aa6.28□□□□□ -1.4
HDAC9-203ENST00000406072 MMP10P09238 476 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 ATF2P15336 505 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 PTPREP23469 700 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 PHKA1P46020 1223 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 GCLCP48506 637 aaPredicted RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 ITIH3Q06033 890 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 CDC37Q16543 378 aaPredicted RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 MIS18BP1Q6P0N0 1132 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 EPM2AIP1Q7L775 607 aaPredicted RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 CABP7Q86V35 215 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 RTKN2Q8IZC4 609 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 MAML1Q92585 1016 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 P2RX5Q93086 422 aa6.27□□□□□ -1.4
HDAC9-203ENST00000406072 PPWD1Q96BP3 646 aaKnown RBP6.27□□□□□ -1.4
HDAC9-203ENST00000406072 FERMT1Q9BQL6 677 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms