RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 FANCBQ8NB91 859 aa7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 KAT2BQ92831 832 aa7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 GPKOWQ92917 476 aaPredicted RBP eCLIP7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CUL5Q93034 780 aa7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CCDC34Q96HJ3 373 aa7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 TGS1Q96RS0 853 aaKnown RBP7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 GOLPH3LQ9H4A5 285 aa7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 KIAA1468Q9P260 1216 aa7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 HPSEQ9Y251 543 aa7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PAXBP1Q9Y5B6 917 aa7.18□□□□□ -1.26
SMARCE1P6-201ENST00000398372 TANC1Q9C0D5 1861 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PRR23AA6NEV1 266 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 SMTNL1A8MU46 457 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 BECN2A8MW95 431 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 IKBKBO14920 756 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PRPF3O43395 683 aaKnown RBP7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 GGPS1O95749 300 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PSEN2P49810 448 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ZNF75DP51815 510 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PTPN11Q06124 597 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 RAD51AP2Q09MP3 1159 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PTPAQ15257 358 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 C11orf91Q3C1V1 193 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CELF3Q5SZQ8 465 aaKnown RBP7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 RESP18Q5W5W9 173 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 GDF6Q6KF10 455 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 KANK3Q6NY19 840 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 FAM117BQ6P1L5 589 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 KCNV1Q6PIU1 500 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 LUZP1Q86V48 1076 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 FBXL6Q8N531 539 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PPTC7Q8NI37 304 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 KIAA1524Q8TCG1 905 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 GLMNQ92990 594 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 EMID1Q96A84 441 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PABPC5Q96DU9 382 aaKnown RBP7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 SPATA33Q96N06 139 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 SDF4Q9BRK5 362 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PYM1Q9BRP8 204 aaKnown RBP7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ZBED2Q9BTP6 218 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 DNAJC25Q9H1X3 360 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 BCAS3Q9H6U6 928 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PSTPIP2Q9H939 334 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 MLXIPQ9HAP2 919 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 IMPACTQ9P2X3 320 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 TUBE1Q9UJT0 475 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 NOD1Q9Y239 953 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 JRKLQ9Y4A0 524 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CLIC4Q9Y696 253 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 FRMPD4Q14CM0 1322 aa7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PTPRZ1P23471 2315 aaPredicted RBP7.17□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CACNA1BQ00975 2339 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 SPATA31C2B4DYI2 1134 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 HAS3O00219 553 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PIK3CDO00329 1044 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ATP8B1O43520 1251 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 STAM2O75886 525 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ZNF202O95125 648 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ZNF286BP0CG31 522 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 TGFB3P10600 412 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PFKFB1P16118 471 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ATP2B1P20020 1258 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 UBA1P22314 1058 aaKnown RBP7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 AVPR2P30518 371 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ICAM3P32942 547 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 RFC2P35250 354 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ABL2P42684 1182 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 SYKP43405 635 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 TRAPPC10P48553 1259 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 NDUFA8P51970 172 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 GSDMDP57764 484 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 NLRP12P59046 1061 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 ZXDAP98168 799 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 AKAP17AQ02040 695 aaKnown RBP7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 GUCY1B3Q02153 619 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CEBPZQ03701 1054 aaKnown RBP7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 SEMA3FQ13275 785 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 BFSP2Q13515 415 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PTGISQ16647 500 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 UBE2SQ16763 222 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 HSDL1Q3SXM5 330 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 GNPTABQ3T906 1256 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PCNX4Q63HM2 1172 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 HEATR3Q7Z4Q2 680 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 SESTD1Q86VW0 696 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 TRIML1Q8N9V2 468 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 IQUBQ8NA54 791 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 KIF18AQ8NI77 898 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 MRPL38Q96DV4 380 aaKnown RBP7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CNTNAP3BQ96NU0 1288 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CTAGE1Q96RT6 745 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 RAD9AQ99638 391 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 PRRX2Q99811 253 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 KATNAL1Q9BW62 490 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 SLC26A6Q9BXS9 759 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CNTNAP3Q9BZ76 1288 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 TRIM5Q9C035 493 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 CXorf56Q9H5V9 222 aa7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 NPDC1Q9NQX5 325 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1P6-201ENST00000398372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms