RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 EDAQ92838 391 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 COL26A1Q96A83 441 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 MRPL38Q96DV4 380 aaKnown RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 GPATCH3Q96I76 525 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 ZNF668Q96K58 619 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 MFSD14AQ96MC6 490 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 SPATA33Q96N06 139 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 ZSCAN10Q96SZ4 725 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 PPP1R16BQ96T49 567 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 SLC9A7Q96T83 725 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 IFIH1Q9BYX4 1025 aaKnown RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 UPF3BQ9BZI7 483 aaKnown RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 FAM49AQ9H0Q0 323 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 SMOC2Q9H3U7 446 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 TUT1Q9H6E5 874 aaKnown RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 DCTPP1Q9H773 170 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 C7orf69Q9H7B7 122 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 TLE6Q9H808 572 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 EPB41L4AQ9HCS5 686 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 VTA1Q9NP79 307 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 COL20A1Q9P218 1284 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 LIMD1Q9UGP4 676 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 CDH22Q9UJ99 828 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 DDX41Q9UJV9 622 aaKnown RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 RCAN3Q9UKA8 241 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 Q9Y3F1 56 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 MRVI1Q9Y6F6 885 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 USP34Q70CQ2 3546 aa2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 GREB1LQ9C091 1923 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.18-201ENST00000391200 CKAP5Q14008 2032 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 A0A1W2PNR3 127 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 RBM47A0AV96 593 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 C17orf102A2RUQ5 167 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 PRR33A8MZF0 331 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 NT5C1B-RDH14C9J2C7 533 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 KLRF2D3W0D1 207 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 H3BNC9 293 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 NOP56O00567 594 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 MBTPS2O43462 519 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 DCXO43602 365 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 PI15O43692 258 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 ATP9AO75110 1047 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 CSDE1O75534 798 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 GJB5O95377 273 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 GGPS1O95749 300 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 MMP3P08254 477 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 PARP1P09874 1014 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 SPATA31D3P0C874 917 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 SMIM10L2AP0DMW4 78 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 SMIM10L2BP0DMW5 78 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 HSPD1P10809 573 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 GHRP10912 638 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 PDHBP11177 359 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 AVPR2P30518 371 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 RFC2P35250 354 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 NDUFV1P49821 464 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 OAZ1P54368 228 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 VCPP55072 806 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 RRP1P56182 461 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 ERVFC1P60507 584 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 ZXDAP98168 799 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 ARHGAP1Q07960 439 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 ZNF543Q08ER8 600 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 APOBRQ0VD83 1088 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 NMIQ13287 307 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 PTK7Q13308 1070 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 PTPROQ16827 1216 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 SKOR2Q2VWA4 1001 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 MCMDC2Q4G0Z9 681 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 CELF3Q5SZQ8 465 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 FAM102BQ5T8I3 360 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 DIEXFQ68CQ4 756 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 RNF43Q68DV7 783 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 RUFY4Q6ZNE9 571 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 SPATA31D4Q6ZUB0 917 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 ADGRD2Q7Z7M1 963 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 RPAINQ86UA6 219 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 VSIG10LQ86VR7 867 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 NLRP8Q86W28 1048 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 KLHL23Q8NBE8 558 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 TMEM87AQ8NBN3 555 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 RNF169Q8NCN4 708 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 FLCNQ8NFG4 579 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 SPPL3Q8TCT6 385 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 SYTL5Q8TDW5 730 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 DCAF4Q8WV16 495 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 TRAPPC12Q8WVT3 735 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 TSC1Q92574 1164 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 GLG1Q92896 1179 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 TOP1MTQ969P6 601 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 YTHDC1Q96MU7 727 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 CTAGE1Q96RT6 745 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 PIGSQ96S52 555 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 MPHOSPH6Q99547 160 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 LNPKQ9C0E8 428 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 RANBP17Q9H2T7 1088 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 NSUN3Q9H649 340 aaKnown RBP2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 KAT14Q9H8E8 782 aa2.19□□□□□ -2.06
SNORA40.18-201ENST00000391200 JMJD4Q9H9V9 463 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms