RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RAD51Q06609 339 aa16.04■□□□□ 0.16
UBE3B-202ENST00000342494 ZSCAN26Q16670 478 aa16.04■□□□□ 0.16
UBE3B-202ENST00000342494 RSBN1LQ6PCB5 846 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-202ENST00000342494 CYFIP1Q7L576 1253 aa16.04■□□□□ 0.16
UBE3B-202ENST00000342494 TTC13Q8NBP0 860 aa16.04■□□□□ 0.16
UBE3B-202ENST00000342494 ZNF560Q96MR9 790 aa16.04■□□□□ 0.16
UBE3B-202ENST00000342494 BARHL2Q9NY43 387 aa16.04■□□□□ 0.16
UBE3B-202ENST00000342494 CLTAP09496 248 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 PLS3P13797 630 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 STMN1P16949 149 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 VAMP7P51809 220 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 ORC2Q13416 577 aaPredicted RBP16.03■□□□□ 0.16
UBE3B-202ENST00000342494 TRIM68Q6AZZ1 485 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 TTC23LQ6PF05 361 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 SIRT2Q8IXJ6 389 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 GJB4Q9NTQ9 266 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 SEL1LQ9UBV2 794 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 CA4P22748 312 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 PHEXP78562 749 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 MAGEB5Q9BZ81 275 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 RASGRF2O14827 1237 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 SNX2O60749 519 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 RCAN1P53805 252 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 FBXL13Q8NEE6 735 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 PVALEFA0A1B0GWK0 134 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 SNAPC2Q13487 334 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 KNOP1Q1ED39 458 aaKnown RBP16.03■□□□□ 0.16
UBE3B-202ENST00000342494 NEDD1Q8NHV4 660 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 TBC1D16Q8TBP0 767 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 SCG3Q8WXD2 468 aaKnown RBP16.03■□□□□ 0.16
UBE3B-202ENST00000342494 PARK7Q99497 189 aaKnown RBP16.03■□□□□ 0.16
UBE3B-202ENST00000342494 FMO2Q99518 471 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 EFHD1Q9BUP0 239 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 PYCARDQ9ULZ3 195 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 MAGI3Q5TCQ9 1506 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 FGGP02679 453 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
UBE3B-202ENST00000342494 STRIP1Q5VSL9 837 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 SZRD1Q7Z422 152 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 CRAMP1Q96RY5 1269 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 ZFYVE28Q9HCC9 887 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 DYRK4Q9NR20 520 aa16.03■□□□□ 0.16
UBE3B-202ENST00000342494 DNAJC17Q9NVM6 304 aaKnown RBP16.03■□□□□ 0.16
UBE3B-202ENST00000342494 PIN4Q9Y237 131 aaKnown RBP16.03■□□□□ 0.16
UBE3B-202ENST00000342494 STAT5BP51692 787 aa16.02■□□□□ 0.16
UBE3B-202ENST00000342494 SNX19Q92543 992 aa16.02■□□□□ 0.16
UBE3B-202ENST00000342494 MTA3Q9BTC8 594 aa16.02■□□□□ 0.16
UBE3B-202ENST00000342494 SP110Q9HB58 689 aa16.02■□□□□ 0.16
UBE3B-202ENST00000342494 CEP72Q9P209 647 aa16.02■□□□□ 0.16
UBE3B-202ENST00000342494 MXD4Q14582 209 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-202ENST00000342494 SAAL1Q96ER3 474 aa16.02■□□□□ 0.16
UBE3B-202ENST00000342494 PANX2Q96RD6 677 aa16.02■□□□□ 0.16
UBE3B-202ENST00000342494 ZBTB18Q99592 522 aa16.02■□□□□ 0.16
UBE3B-202ENST00000342494 JPH1Q9HDC5 661 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-202ENST00000342494 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.16
UBE3B-202ENST00000342494 WDR91A4D1P6 747 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 TRAPPC3O43617 180 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 C6orf222P0C671 652 aaPredicted RBP16.02■□□□□ 0.15
UBE3B-202ENST00000342494 RALAP11233 206 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 NCF2P19878 526 aaPredicted RBP16.02■□□□□ 0.15
UBE3B-202ENST00000342494 PSMC1P62191 440 aaKnown RBP16.02■□□□□ 0.15
UBE3B-202ENST00000342494 ART3Q13508 389 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 KYAT1Q16773 422 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 DCAF4L1Q3SXM0 396 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 ANKRD20A4Q4UJ75 823 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 ANKRD20A8PQ5CZ79 823 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 ANKRD20A2Q5SQ80 823 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 ANKRD20A1Q5TYW2 823 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 BTBD8Q5XKL5 378 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 SPATA17Q96L03 361 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 LY9Q9HBG7 655 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 RBAKQ9NYW8 714 aaPredicted RBP16.02■□□□□ 0.15
UBE3B-202ENST00000342494 SPECC1L-ADORA2AF8WAN1 911 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 KRT37O76014 449 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 GPC5P78333 572 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 NME3Q13232 169 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 EFHC2Q5JST6 749 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 HEMGNQ9BXL5 484 aa16.02■□□□□ 0.15
UBE3B-202ENST00000342494 PDE1CQ14123 709 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 RNF149Q8NC42 400 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 CCDC124Q96CT7 223 aaKnown RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 TEX13BQ9BXU2 312 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 MX2P20592 715 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 GNA15P30679 374 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 ARL4CP56559 192 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 PPFIA2O75334 1257 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 IFNA8P32881 189 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 KCNH2Q12809 1159 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 ALX1Q15699 326 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 EIF2AK1Q9BQI3 630 aaKnown RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 PCSK1NQ9UHG2 260 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 WDR19Q8NEZ3 1342 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 MIF4GDA9UHW6 222 aaKnown RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 DYNC1LI2O43237 492 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 CD2BP2O95400 341 aaKnown RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 EFNA5P52803 228 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 KRT39Q6A163 491 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 SIK2Q9H0K1 926 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms