RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 MOV10L1Q9BXT6 1211 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 ACAD9Q9H845 621 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 NAGPAQ9UK23 515 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 AFG3L2Q9Y4W6 797 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 PCDHA10Q9Y5I2 948 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 PTPRFP10586 1907 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 FAM170AA1A519 330 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 F8VZ95 297 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 ATP8B1O43520 1251 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 EVI5O60447 810 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 ERLIN1O75477 346 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 ZMYND10O75800 440 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 KCNA2P16389 499 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 PRKCIP41743 596 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 ALCAMQ13740 583 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 ALKBH5Q6P6C2 394 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 HNRNPLLQ8WVV9 542 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 INTS2Q9H0H0 1204 aaKnown RBP8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 DNAJC12Q9UKB3 198 aa8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 PACSIN2Q9UNF0 486 aaPredicted RBP8.7□□□□□ -1.02
HMGXB4-201ENST00000216106 CCDC169A6NNP5 214 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 ZNF862O60290 1169 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 MAPTP10636 758 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 KRT13P13646 458 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 TCP1P17987 556 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 ZNF746Q6NUN9 644 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 XRRA1Q6P2D8 792 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 CNKSR2Q8WXI2 1034 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 HSPBP1Q9NZL4 362 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 EMSYQ7Z589 1322 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 MYH9P35579 1960 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 PRLRP16471 622 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 STAT1P42224 750 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 MATR3P43243 847 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 GTF2BQ00403 316 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 VGLL4Q14135 290 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 DRAP1Q14919 205 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 CCDC181Q5TID7 509 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 HINFPQ9BQA5 517 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 JPH1Q9HDC5 661 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 ANKEF1Q9NU02 776 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 APEX2Q9UBZ4 518 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 LRRN2O75325 713 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 USP2O75604 605 aaPredicted RBP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 LMNB1P20700 586 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 SOX5P35711 763 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 NCKAP1LP55160 1127 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 ARHGAP44Q17R89 818 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 SUPT20HL1Q3ZLR7 823 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 TREML2Q5T2D2 321 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 SWSAP1Q6NVH7 229 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 WDR93Q6P2C0 686 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 INTS8Q75QN2 995 aaKnown RBP8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 XXYLT1Q8NBI6 393 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 MS4A14Q96JA4 679 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 CEP170P1Q96L14 293 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 GOLPH3Q9H4A6 298 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 PCDHGC5Q9Y5F6 944 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 PPP2R3BQ9Y5P8 575 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 LOC285556D6RIA3 1793 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 SBF1O95248 1867 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 OTOFQ9HC10 1997 aa8.69□□□□□ -1.02
HMGXB4-201ENST00000216106 GRID2IPA4D2P6 1211 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 GOLGA8IPA6NC78 632 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 GOLGA8JA6NMD2 632 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 ATP2A1O14983 1001 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 DDNO94850 711 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 FERP16591 822 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 NPTX2P47972 431 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 GCLMP48507 274 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 VAMP7P51809 220 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 MRPS25P82663 173 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 PPP3CAQ08209 521 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 DMP1Q13316 513 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 PTPROQ16827 1216 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 NOL9Q5SY16 702 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 PHLDB3Q6NSJ2 640 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 VPS36Q86VN1 386 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 CCDC60Q8IWA6 550 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 SPATA4Q8NEY3 305 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 TIPINQ9BVW5 301 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 STK33Q9BYT3 514 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 GPR88Q9GZN0 384 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.68□□□□□ -1.021e-16■■■■■ 347.8
HMGXB4-201ENST00000216106 HOXC10Q9NYD6 342 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 PCNTO95613 3336 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 DDX3XO00571 662 aaKnown RBP eCLIP8.68□□□□□ -1.021e-7■□□□□ 11
HMGXB4-201ENST00000216106 MAFGO15525 162 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 NOP2P46087 812 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 MYBPC2Q14324 1141 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 TMEM161BQ8NDZ6 487 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 RDM1Q8NG50 284 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 U2AF1L4Q8WU68 220 aaKnown RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 BSNDQ8WZ55 320 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 SLC9A2Q9UBY0 812 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 SEPT9Q9UHD8 586 aaPredicted RBP8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 L1RE1Q9UN81 338 aa8.68□□□□□ -1.02
HMGXB4-201ENST00000216106 SNCAIPQ9Y6H5 919 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms