RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Tmem132cQ8CEF9 1099 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Slc8a2Q8K596 921 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 PccaQ91ZA3 724 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Def8Q99J78 448 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Thap2Q9D305 217 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 ParvaQ9EPC1 372 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Trpc4Q9QUQ5 974 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Cbx8Q9QXV1 362 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Magi3Q9EQJ9 1476 aa13.22□□□□□ -0.29
Ssh1-202ENSMUST00000112298 LnpkQ7TQ95 425 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Psmd5Q8BJY1 504 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Nudcd3Q8R1N4 363 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Zfp212G3X8R7 492 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Zfp846G3X996 541 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Lrrc6O88978 473 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Tpp1O89023 562 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Atp6v1e1P50518 226 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Krt35Q497I4 455 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ptk6Q64434 451 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 PrimpolQ6P1E7 537 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Trim62Q80V85 475 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ireb2Q811J3 963 aaKnown RBP13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 CenpuQ8C4M7 410 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Sulf1Q8K007 870 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Pard3bQ9CSB4 1203 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Fam84aQ9D650 292 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Mrps9Q9D7N3 390 aaKnown RBP13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Gtf2ird1Q9JI57 1104 aaKnown RBP13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 ArcQ9WV31 396 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 6030498E09RikB1AX85 169 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Gm8994E9PV04 411 aaKnown RBP13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Gm20721E9Q2U8 318 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Serpinb3aG3X9V8 387 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Slc1a1P51906 523 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Kcnb1Q03717 857 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Edem3Q2HXL6 931 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 PRAG1Q571I4 1179 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Flot2Q60634 428 aaKnown RBP13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Ccna1Q61456 421 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 NostrinQ6WKZ7 506 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Pip4k2cQ91XU3 421 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Iqcf1Q9D9K8 182 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Fhod3Q76LL6 1578 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Usp54Q8BL06 1588 aaKnown RBP13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Adgrf5G5E8Q8 1348 aa13.21□□□□□ -0.29
Ssh1-202ENSMUST00000112298 Kif23E9Q5G3 953 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Phldb3E9QAF4 648 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Gm8879F6R3J9 157 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Gsdmc4Q3TR54 480 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Bsdc1Q80Y55 427 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Calhm6Q8C9E8 313 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Mgea5Q9EQQ9 916 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Map3k4O08648 1597 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Akr1b1P45376 316 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Setd4P58467 439 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Ddx5Q61656 614 aaKnown RBP13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Dhx40Q6PE54 779 aaKnown RBP13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Gramd1bQ80TI0 738 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Washc5Q8C2E7 1159 aaKnown RBP13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Q91WD4 421 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Vps33aQ9D2N9 598 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Drap1Q9D6N5 205 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Peg12Q9WVA7 283 aa13.21□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Cfap65Q3V0B4 1847 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Usp35M0QWN7 1009 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Ms4a2P20490 235 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Lzts1P60853 599 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Ttf2Q5NC05 1138 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Pspc1Q8R326 523 aaKnown RBP13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Pus3Q9JI38 481 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Stk11Q9WTK7 436 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 L3mbtl1A2A5N8 826 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Trappc11B2RXC1 1133 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Slc4a1P04919 929 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Arpp19P56212 112 aaKnown RBP13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Pbxip1Q3TVI8 727 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Lins1Q3U1D0 764 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Zc4h2Q68FG0 224 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Fhod1Q6P9Q4 1197 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Usp17leQ7M764 540 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Scrn2Q8VCA8 425 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Ugp2Q91ZJ5 508 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Tmem192Q9CXT7 266 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Chordc1Q9D1P4 331 aaKnown RBP13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Tmem47Q9JJG6 181 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Rnf4Q9QZS2 194 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Clrn2B2RVW2 232 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Atxn10P28658 475 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Gm16430A6X8J1 155 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Asprv1Q09PK2 339 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 PrcpQ7TMR0 491 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Letm2Q7TNU7 480 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Arhgef7Q9ES28 862 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Adam22Q9R1V6 904 aa13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Kif14L0N7N1 1674 aaKnown RBP13.2□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Rfx8D3YU81 596 aa13.19□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Aco1P28271 889 aaKnown RBP13.19□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Atp9bP98195 1146 aa13.19□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Kcnma1Q08460 1209 aa13.19□□□□□ -0.3
Ssh1-202ENSMUST00000112298 Qrich1Q3UA37 777 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms