RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YPR097WQ06839 1073 aa5.21□□□□□ -1.58
RPC40YPR110C SSA1P10591 642 aaKnown RBP5.2□□□□□ -1.58
RPC40YPR110C YDL206WQ12424 762 aa5.2□□□□□ -1.58
RPC40YPR110C ENO1P00924 437 aaKnown RBP5.19□□□□□ -1.58
RPC40YPR110C BRE2P43132 505 aa5.19□□□□□ -1.58
RPC40YPR110C CPS1P27614 576 aa5.18□□□□□ -1.58
RPC40YPR110C TPD3P31383 635 aa5.18□□□□□ -1.58
RPC40YPR110C GEF1P37020 779 aa5.18□□□□□ -1.58
RPC40YPR110C PAC1P39946 494 aaKnown RBP5.18□□□□□ -1.58
RPC40YPR110C ALR1Q08269 859 aa5.18□□□□□ -1.58
RPC40YPR110C MCM16Q12262 181 aa5.18□□□□□ -1.58
RPC40YPR110C PDC1P06169 563 aaKnown RBP5.17□□□□□ -1.58
RPC40YPR110C PAT1P25644 796 aaKnown RBP5.17□□□□□ -1.58
RPC40YPR110C PEP12P32854 288 aa5.17□□□□□ -1.58
RPC40YPR110C MRX12P47084 519 aa5.16□□□□□ -1.58
RPC40YPR110C KXD1P53158 218 aa5.16□□□□□ -1.58
RPC40YPR110C RDS2P19541 446 aaKnown RBP5.15□□□□□ -1.59
RPC40YPR110C FIG4P42837 879 aa5.15□□□□□ -1.59
RPC40YPR110C NOB1Q08444 459 aaKnown RBP5.15□□□□□ -1.59
RPC40YPR110C MOD5P07884 428 aa5.14□□□□□ -1.59
RPC40YPR110C TEC1P18412 486 aa5.14□□□□□ -1.59
RPC40YPR110C PUP1P25043 261 aa5.14□□□□□ -1.59
RPC40YPR110C GUT2P32191 649 aa5.14□□□□□ -1.59
RPC40YPR110C HXT10P43581 546 aa5.14□□□□□ -1.59
RPC40YPR110C YPR084WQ06821 456 aa5.14□□□□□ -1.59
RPC40YPR110C FRA1Q07825 749 aa5.14□□□□□ -1.59
RPC40YPR110C CDC4P07834 779 aa5.13□□□□□ -1.59
RPC40YPR110C GAR1P28007 205 aaKnown RBP5.13□□□□□ -1.59
RPC40YPR110C PUS5Q06244 254 aa5.13□□□□□ -1.59
RPC40YPR110C VAC17P25591 423 aa5.12□□□□□ -1.59
RPC40YPR110C TGL4P36165 910 aa5.12□□□□□ -1.59
RPC40YPR110C EMP47P43555 445 aa5.12□□□□□ -1.59
RPC40YPR110C APL6P46682 809 aa5.12□□□□□ -1.59
RPC40YPR110C YPL062WQ02781 134 aa5.12□□□□□ -1.59
RPC40YPR110C STE20Q03497 939 aaKnown RBP5.12□□□□□ -1.59
RPC40YPR110C ATG3P40344 310 aa5.11□□□□□ -1.59
RPC40YPR110C RRD1P40454 393 aaKnown RBP5.11□□□□□ -1.59
RPC40YPR110C UTP13Q05946 817 aaKnown RBP5.11□□□□□ -1.59
RPC40YPR110C MET32Q12041 191 aa5.11□□□□□ -1.59
RPC40YPR110C ISF1P32488 338 aa5.1□□□□□ -1.59
RPC40YPR110C NOP8Q08287 484 aaPredicted RBP5.1□□□□□ -1.59
RPC40YPR110C SLX8P40072 274 aa5.09□□□□□ -1.59
RPC40YPR110C HED1Q03937 162 aa5.09□□□□□ -1.59
RPC40YPR110C YML083CQ04526 418 aa5.09□□□□□ -1.59
RPC40YPR110C ENV9Q08651 330 aa5.09□□□□□ -1.59
RPC40YPR110C GCR2Q01722 534 aa5.08□□□□□ -1.6
RPC40YPR110C GAL2P13181 574 aa5.07□□□□□ -1.6
RPC40YPR110C MET22P32179 357 aa5.07□□□□□ -1.6
RPC40YPR110C RPL34AP87262 121 aaPredicted RBP5.07□□□□□ -1.6
RPC40YPR110C YML020WQ03722 664 aa5.07□□□□□ -1.6
RPC40YPR110C CDC3P32457 520 aaKnown RBP5.06□□□□□ -1.6
RPC40YPR110C PHO87P25360 923 aa5.05□□□□□ -1.6
RPC40YPR110C ASH1P34233 588 aa5.05□□□□□ -1.6
RPC40YPR110C GBP2P25555 427 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
RPC40YPR110C SOH1P38633 127 aa5.04□□□□□ -1.6
RPC40YPR110C KTR7P40504 517 aa5.04□□□□□ -1.6
RPC40YPR110C ECM23Q02710 187 aa5.04□□□□□ -1.6
RPC40YPR110C HAP4P14064 554 aa5.03□□□□□ -1.6
RPC40YPR110C IXR1P33417 597 aa5.03□□□□□ -1.6
RPC40YPR110C EMW1P42842 904 aaKnown RBP5.02□□□□□ -1.61
RPC40YPR110C PUF6Q04373 656 aaKnown RBP5.02□□□□□ -1.61
RPC40YPR110C AFT1P22149 690 aa5.01□□□□□ -1.61
RPC40YPR110C HAL5P38970 855 aaKnown RBP5.01□□□□□ -1.61
RPC40YPR110C ACS2P52910 683 aaKnown RBP5.01□□□□□ -1.61
RPC40YPR110C SYH1Q02875 849 aaKnown RBP5.01□□□□□ -1.61
RPC40YPR110C CWC15Q03772 175 aaKnown RBP5.01□□□□□ -1.61
RPC40YPR110C TSC13Q99190 310 aa5.01□□□□□ -1.61
RPC40YPR110C KIP2P28743 706 aa5□□□□□ -1.61
RPC40YPR110C UBX7P38349 436 aa5□□□□□ -1.61
RPC40YPR110C YFL034WP43564 1073 aa5□□□□□ -1.61
RPC40YPR110C YDR444WQ04093 687 aa5□□□□□ -1.61
RPC40YPR110C ATG20Q07528 640 aa5□□□□□ -1.61
RPC40YPR110C GAS4Q08271 471 aa5□□□□□ -1.61
RPC40YPR110C SPT2P06843 333 aaPredicted RBP4.99□□□□□ -1.61
RPC40YPR110C MRT4P33201 236 aaKnown RBP4.99□□□□□ -1.61
RPC40YPR110C SSF1P38789 453 aaPredicted RBP4.99□□□□□ -1.61
RPC40YPR110C ROM1P53046 1155 aa4.99□□□□□ -1.61
RPC40YPR110C HST3P53687 447 aa4.99□□□□□ -1.61
RPC40YPR110C ITT1Q04638 464 aa4.99□□□□□ -1.61
RPC40YPR110C ISR1Q06098 443 aaKnown RBP4.99□□□□□ -1.61
RPC40YPR110C SLD2P34252 453 aa4.98□□□□□ -1.61
RPC40YPR110C YJR115WP47152 169 aa4.98□□□□□ -1.61
RPC40YPR110C HDA3Q06623 655 aa4.98□□□□□ -1.61
RPC40YPR110C CBC2Q08920 208 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
RPC40YPR110C PDI1P17967 522 aaKnown RBP4.97□□□□□ -1.61
RPC40YPR110C ISU1Q03020 165 aa4.97□□□□□ -1.61
RPC40YPR110C YDL176WQ12027 708 aa4.97□□□□□ -1.61
RPC40YPR110C FBP26P32604 452 aa4.96□□□□□ -1.62
RPC40YPR110C AIM9P40053 627 aaKnown RBP4.96□□□□□ -1.62
RPC40YPR110C LCB5Q06147 687 aaKnown RBP4.96□□□□□ -1.62
RPC40YPR110C HAT1Q12341 374 aa4.96□□□□□ -1.62
RPC40YPR110C STE6P12866 1290 aa4.95□□□□□ -1.62
RPC40YPR110C SRS2P12954 1174 aa4.95□□□□□ -1.62
RPC40YPR110C MIP1P15801 1254 aa4.95□□□□□ -1.62
RPC40YPR110C VAN1P23642 535 aa4.95□□□□□ -1.62
RPC40YPR110C UBP1P25037 809 aa4.95□□□□□ -1.62
RPC40YPR110C TPS3P38426 1054 aaKnown RBP4.95□□□□□ -1.62
RPC40YPR110C RTT106P40161 455 aa4.95□□□□□ -1.62
RPC40YPR110C APP1P53933 587 aa4.95□□□□□ -1.62
RPC40YPR110C MKS1P34072 584 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms