RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W SPE2P21182 396 aa7.34□□□□□ -1.23
SSO1YPL232W RPO41P13433 1351 aaKnown RBP7.33□□□□□ -1.24
SSO1YPL232W KIN4Q01919 800 aa7.33□□□□□ -1.24
SSO1YPL232W CDC27P38042 758 aa7.32□□□□□ -1.24
SSO1YPL232W YKL222CP35995 705 aa7.31□□□□□ -1.24
SSO1YPL232W ERT1P38140 529 aa7.31□□□□□ -1.24
SSO1YPL232W GRE2Q12068 342 aaKnown RBP7.31□□□□□ -1.24
SSO1YPL232W RCR1P38212 213 aa7.3□□□□□ -1.24
SSO1YPL232W YML133CQ03099 1374 aa7.3□□□□□ -1.24
SSO1YPL232W YLL067CQ07888 1374 aa7.3□□□□□ -1.24
SSO1YPL232W YLL066CQ99208 1374 aa7.3□□□□□ -1.24
SSO1YPL232W UTP10P42945 1769 aaKnown RBP7.29□□□□□ -1.24
SSO1YPL232W HPC2Q01448 625 aa7.29□□□□□ -1.24
SSO1YPL232W FPK1P53739 893 aa7.28□□□□□ -1.24
SSO1YPL232W MLP1Q02455 1875 aaKnown RBP7.28□□□□□ -1.24
SSO1YPL232W DUS1P53759 423 aaKnown RBP7.27□□□□□ -1.25
SSO1YPL232W RIX7Q07844 837 aaKnown RBP7.27□□□□□ -1.25
SSO1YPL232W FAS2P19097 1887 aaKnown RBP7.27□□□□□ -1.25
SSO1YPL232W GRX1P25373 110 aaKnown RBP7.26□□□□□ -1.25
SSO1YPL232W SPT21P35209 758 aa7.26□□□□□ -1.25
SSO1YPL232W CWH41P53008 833 aa7.26□□□□□ -1.25
SSO1YPL232W KIP3P53086 805 aaKnown RBP7.26□□□□□ -1.25
SSO1YPL232W ATG13Q06628 738 aa7.26□□□□□ -1.25
SSO1YPL232W POM152P39685 1337 aa7.26□□□□□ -1.25
SSO1YPL232W RRT14P40470 206 aa7.25□□□□□ -1.25
SSO1YPL232W DPS1P04802 557 aaKnown RBP7.24□□□□□ -1.25
SSO1YPL232W ETP1P38748 585 aaKnown RBP7.24□□□□□ -1.25
SSO1YPL232W YKR023WP36119 530 aaKnown RBP7.23□□□□□ -1.25
SSO1YPL232W NYV1Q12255 253 aa7.22□□□□□ -1.25
SSO1YPL232W FIG2P25653 1609 aa7.22□□□□□ -1.25
SSO1YPL232W UBP10P53874 792 aaPredicted RBP7.21□□□□□ -1.26
SSO1YPL232W GAS4Q08271 471 aa7.21□□□□□ -1.26
SSO1YPL232W PMD1P32634 1753 aa7.2□□□□□ -1.26
SSO1YPL232W OSM1P21375 501 aaKnown RBP7.2□□□□□ -1.26
SSO1YPL232W YLR278CQ05854 1341 aa7.2□□□□□ -1.26
SSO1YPL232W SLI15P38283 698 aa7.19□□□□□ -1.26
SSO1YPL232W INP54Q08227 384 aaKnown RBP7.19□□□□□ -1.26
SSO1YPL232W THS1P04801 734 aaKnown RBP7.18□□□□□ -1.26
SSO1YPL232W RPS9BP05755 195 aaKnown RBP7.17□□□□□ -1.26
SSO1YPL232W RET1P22276 1149 aaKnown RBP7.17□□□□□ -1.26
SSO1YPL232W PFF1P38244 976 aa7.17□□□□□ -1.26
SSO1YPL232W NST1P53935 1240 aa7.17□□□□□ -1.26
SSO1YPL232W SEC3P33332 1336 aaKnown RBP7.17□□□□□ -1.26
SSO1YPL232W PDI1P17967 522 aaKnown RBP7.16□□□□□ -1.26
SSO1YPL232W SDH2P21801 266 aa7.16□□□□□ -1.26
SSO1YPL232W SMY1P32364 656 aaKnown RBP7.16□□□□□ -1.26
SSO1YPL232W ATG20Q07528 640 aa7.16□□□□□ -1.26
SSO1YPL232W AUS1Q08409 1394 aa7.16□□□□□ -1.26
SSO1YPL232W TOP1P04786 769 aa7.15□□□□□ -1.26
SSO1YPL232W MAP2P38174 421 aaKnown RBP7.15□□□□□ -1.26
SSO1YPL232W RTF1P53064 558 aa7.15□□□□□ -1.26
SSO1YPL232W YBP2P53169 641 aa7.15□□□□□ -1.26
SSO1YPL232W TUM1Q08686 304 aaKnown RBP7.15□□□□□ -1.26
SSO1YPL232W RTG2P32608 588 aaKnown RBP7.14□□□□□ -1.27
SSO1YPL232W CTI6Q08923 506 aa7.13□□□□□ -1.27
SSO1YPL232W HKR1P41809 1802 aa7.13□□□□□ -1.27
SSO1YPL232W SHC1P39000 512 aa7.12□□□□□ -1.27
SSO1YPL232W VHR2P40041 505 aa7.12□□□□□ -1.27
SSO1YPL232W NUP145P49687 1317 aa7.11□□□□□ -1.27
SSO1YPL232W ICL1P28240 557 aaPredicted RBP7.11□□□□□ -1.27
SSO1YPL232W MAC1P35192 417 aa7.11□□□□□ -1.27
SSO1YPL232W ERO1Q03103 563 aa7.11□□□□□ -1.27
SSO1YPL232W TFC8Q12308 588 aa7.11□□□□□ -1.27
SSO1YPL232W HOP09932 586 aa7.1□□□□□ -1.27
SSO1YPL232W GRX4P32642 244 aa7.1□□□□□ -1.27
SSO1YPL232W FKH1P40466 484 aa7.09□□□□□ -1.27
SSO1YPL232W TAP42Q04372 366 aa7.09□□□□□ -1.27
SSO1YPL232W YIL089WP40500 205 aa7.08□□□□□ -1.28
SSO1YPL232W SRF1Q12516 437 aa7.08□□□□□ -1.28
SSO1YPL232W LPD1P09624 499 aaKnown RBP7.07□□□□□ -1.28
SSO1YPL232W SCT1P32784 759 aa7.07□□□□□ -1.28
SSO1YPL232W TEA1P47988 759 aa7.07□□□□□ -1.28
SSO1YPL232W DCD1P06773 312 aa7.06□□□□□ -1.28
SSO1YPL232W YKU70P32807 602 aa7.06□□□□□ -1.28
SSO1YPL232W BUD27P43573 796 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
SSO1YPL232W RAT1Q02792 1006 aaKnown RBP7.06□□□□□ -1.28
SSO1YPL232W PIB1Q06651 286 aa7.05□□□□□ -1.28
SSO1YPL232W MDG1P53885 366 aa7.04□□□□□ -1.28
SSO1YPL232W RMT2Q03305 412 aa7.04□□□□□ -1.28
SSO1YPL232W HIM1Q06674 414 aa7.04□□□□□ -1.28
SSO1YPL232W IRC3Q06683 689 aa7.04□□□□□ -1.28
SSO1YPL232W BDF2Q07442 638 aa7.04□□□□□ -1.28
SSO1YPL232W TYW1Q08960 810 aaKnown RBP7.04□□□□□ -1.28
SSO1YPL232W GRX6Q12438 231 aa7.04□□□□□ -1.28
SSO1YPL232W TIF6Q12522 245 aaKnown RBP7.04□□□□□ -1.28
SSO1YPL232W GSC2P40989 1895 aa7.04□□□□□ -1.28
SSO1YPL232W SIT4P20604 311 aa7.03□□□□□ -1.28
SSO1YPL232W FET4P40988 552 aa7.03□□□□□ -1.28
SSO1YPL232W HSP104P31539 908 aaKnown RBP7.02□□□□□ -1.29
SSO1YPL232W GLC3P32775 704 aa7.02□□□□□ -1.29
SSO1YPL232W ORC1P54784 914 aaPredicted RBP7.02□□□□□ -1.29
SSO1YPL232W CTF4Q01454 927 aa7.02□□□□□ -1.29
SSO1YPL232W TIM50Q02776 476 aa7.02□□□□□ -1.29
SSO1YPL232W PHM7Q12252 991 aa7.02□□□□□ -1.29
SSO1YPL232W GAP1P19145 602 aaPredicted RBP7.01□□□□□ -1.29
SSO1YPL232W SER1P33330 395 aaKnown RBP7.01□□□□□ -1.29
SSO1YPL232W PEA2P40091 420 aa7.01□□□□□ -1.29
SSO1YPL232W YFR016CP43597 1233 aaKnown RBP7.01□□□□□ -1.29
SSO1YPL232W DIB1Q06819 143 aaPredicted RBP7.01□□□□□ -1.29
SSO1YPL232W NOP53Q12080 455 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms