RNA–Protein interactions for RNA: YPL137C

GIP3, Transcript of Cytoplasmic protein that regulates protein phosphatase 1 Glc7p, yeast

Gene GIP3, Length 3,831 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIP3	YPL137C	RAD9	P14737	1309 aa		2.85	□□□□□ -1.95
GIP3	YPL137C	HKR1	P41809	1802 aa		2.85	□□□□□ -1.95
GIP3	YPL137C	SSA4	P22202	642 aa	Known RBP	2.84	□□□□□ -1.95
GIP3	YPL137C	UBP1	P25037	809 aa		2.84	□□□□□ -1.95
GIP3	YPL137C	GUA1	P38625	525 aa	Known RBP	2.84	□□□□□ -1.95
GIP3	YPL137C	OCA5	P38738	679 aa		2.84	□□□□□ -1.95
GIP3	YPL137C	SPT5	P27692	1063 aa	Known RBP	2.84	□□□□□ -1.95
GIP3	YPL137C	BRL1	P38770	471 aa		2.83	□□□□□ -1.96
GIP3	YPL137C	SSF1	P38789	453 aa	Predicted RBP	2.83	□□□□□ -1.96
GIP3	YPL137C	ENT1	Q12518	454 aa		2.83	□□□□□ -1.96
GIP3	YPL137C	KRE5	P22023	1365 aa		2.83	□□□□□ -1.96
GIP3	YPL137C	RPS9B	P05755	195 aa	Known RBP	2.83	□□□□□ -1.96
GIP3	YPL137C	IES2	P40154	320 aa		2.83	□□□□□ -1.96
GIP3	YPL137C	YRB30	P53107	440 aa	Predicted RBP	2.83	□□□□□ -1.96
GIP3	YPL137C	BUD21	Q08492	214 aa	Predicted RBP	2.83	□□□□□ -1.96
GIP3	YPL137C	SIR4	P11978	1358 aa		2.83	□□□□□ -1.96
GIP3	YPL137C	KEX1	P09620	729 aa		2.82	□□□□□ -1.96
GIP3	YPL137C	MAP2	P38174	421 aa	Known RBP	2.82	□□□□□ -1.96
GIP3	YPL137C	APP1	P53933	587 aa		2.82	□□□□□ -1.96
GIP3	YPL137C	COQ8	P27697	501 aa		2.82	□□□□□ -1.96
GIP3	YPL137C	GLC3	P32775	704 aa		2.82	□□□□□ -1.96
GIP3	YPL137C	FAR11	P53917	953 aa		2.82	□□□□□ -1.96
GIP3	YPL137C	MAK16	P10962	306 aa	Predicted RBP	2.81	□□□□□ -1.96
GIP3	YPL137C	CLB5	P30283	435 aa		2.81	□□□□□ -1.96
GIP3	YPL137C	CTH1	P47976	325 aa		2.81	□□□□□ -1.96
GIP3	YPL137C	DIT2	P21595	489 aa		2.81	□□□□□ -1.96
GIP3	YPL137C	ALD4	P46367	519 aa	Known RBP	2.81	□□□□□ -1.96
GIP3	YPL137C	SEC20	P28791	383 aa		2.81	□□□□□ -1.96
GIP3	YPL137C	CDC3	P32457	520 aa	Known RBP	2.81	□□□□□ -1.96
GIP3	YPL137C	NMD2	P38798	1089 aa	Known RBP	2.8	□□□□□ -1.96
GIP3	YPL137C	NOP2	P40991	618 aa	Known RBP	2.8	□□□□□ -1.96
GIP3	YPL137C	TFB3	Q03290	321 aa		2.8	□□□□□ -1.96
GIP3	YPL137C	YBL086C	P38177	466 aa		2.8	□□□□□ -1.96
GIP3	YPL137C	VPS29	P38759	282 aa		2.8	□□□□□ -1.96
GIP3	YPL137C	YGL081W	P53156	320 aa		2.8	□□□□□ -1.96
GIP3	YPL137C	YDR090C	Q03193	310 aa		2.8	□□□□□ -1.96
GIP3	YPL137C	RRP15	Q06511	250 aa	Predicted RBP	2.8	□□□□□ -1.96
GIP3	YPL137C	NPR2	P39923	615 aa		2.8	□□□□□ -1.96
GIP3	YPL137C	UGA2	P38067	497 aa		2.79	□□□□□ -1.96
GIP3	YPL137C	STM1	P39015	273 aa	Known RBP	2.79	□□□□□ -1.96
GIP3	YPL137C	FAS2	P19097	1887 aa	Known RBP	2.79	□□□□□ -1.96
GIP3	YPL137C	ALD2	P47771	506 aa		2.79	□□□□□ -1.96
GIP3	YPL137C	MHP1	P43638	1398 aa		2.79	□□□□□ -1.96
GIP3	YPL137C	PPX1	P38698	397 aa		2.79	□□□□□ -1.96
GIP3	YPL137C	EPS1	P40557	701 aa		2.79	□□□□□ -1.96
GIP3	YPL137C	OSW7	P43611	510 aa		2.79	□□□□□ -1.96
GIP3	YPL137C	MLP1	Q02455	1875 aa	Known RBP	2.79	□□□□□ -1.96
GIP3	YPL137C	GAP1	P19145	602 aa	Predicted RBP	2.78	□□□□□ -1.96
GIP3	YPL137C	CPS1	P27614	576 aa		2.78	□□□□□ -1.96
GIP3	YPL137C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	2.78	□□□□□ -1.96	not detected
GIP3	YPL137C	TTI1	P36097	1038 aa		2.78	□□□□□ -1.96
GIP3	YPL137C	BCH2	P36122	765 aa		2.78	□□□□□ -1.96
GIP3	YPL137C	ATF2	P53296	535 aa		2.78	□□□□□ -1.96
GIP3	YPL137C	NAF1	P53919	492 aa	Known RBP	2.78	□□□□□ -1.96
GIP3	YPL137C	YAF9	P53930	226 aa		2.78	□□□□□ -1.96
GIP3	YPL137C	PUS5	Q06244	254 aa		2.78	□□□□□ -1.96
GIP3	YPL137C	SUP45	P12385	437 aa	Known RBP	2.77	□□□□□ -1.97
GIP3	YPL137C	BDF1	P35817	686 aa		2.77	□□□□□ -1.97
GIP3	YPL137C	NNF1	P47149	201 aa		2.77	□□□□□ -1.97
GIP3	YPL137C	FOX2	Q02207	900 aa	Known RBP	2.77	□□□□□ -1.97
GIP3	YPL137C	GSC2	P40989	1895 aa		2.77	□□□□□ -1.97
GIP3	YPL137C	UBP14	P38237	781 aa	Known RBP	2.77	□□□□□ -1.97
GIP3	YPL137C	YJL049W	P47048	450 aa		2.77	□□□□□ -1.97
GIP3	YPL137C	HST2	P53686	357 aa		2.77	□□□□□ -1.97
GIP3	YPL137C	RIA1	P53893	1110 aa		2.77	□□□□□ -1.97
GIP3	YPL137C	YKR075C	P36155	307 aa		2.76	□□□□□ -1.97
GIP3	YPL137C	BIM1	P40013	344 aa		2.76	□□□□□ -1.97
GIP3	YPL137C	UBP10	P53874	792 aa	Predicted RBP	2.76	□□□□□ -1.97
GIP3	YPL137C	RMD1	Q03441	430 aa		2.76	□□□□□ -1.97
GIP3	YPL137C	ORC6	P38826	435 aa		2.76	□□□□□ -1.97
GIP3	YPL137C	DOT5	P40553	215 aa		2.76	□□□□□ -1.97
GIP3	YPL137C	MRM1	P25270	412 aa		2.76	□□□□□ -1.97
GIP3	YPL137C	FPR3	P38911	411 aa	Known RBP	2.76	□□□□□ -1.97
GIP3	YPL137C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.76	□□□□□ -1.97	not detected
GIP3	YPL137C	YPP1	P46951	817 aa		2.76	□□□□□ -1.97
GIP3	YPL137C	MRX10	Q05648	414 aa		2.76	□□□□□ -1.97
GIP3	YPL137C	EDS1	P38073	919 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	CSN12	P47130	423 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	TIF1	P10081	395 aa	Known RBP	2.75	□□□□□ -1.97
GIP3	YPL137C	RRN6	P32786	894 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	SPC42	P36094	363 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	SCY1	P53009	804 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	NOB1	Q08444	459 aa	Known RBP	2.75	□□□□□ -1.97
GIP3	YPL137C	PEP12	P32854	288 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	BRN1	P38170	754 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	RCR1	P38212	213 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	ENP1	P38333	483 aa	Known RBP	2.75	□□□□□ -1.97
GIP3	YPL137C	YJR107W	P47145	328 aa		2.75	□□□□□ -1.97
GIP3	YPL137C	MSC6	Q08818	692 aa	Known RBP	2.75	□□□□□ -1.97
GIP3	YPL137C	SIT4	P20604	311 aa		2.74	□□□□□ -1.97
GIP3	YPL137C	PTC3	P34221	468 aa	Known RBP	2.74	□□□□□ -1.97
GIP3	YPL137C	TOS1	P38288	455 aa		2.74	□□□□□ -1.97
GIP3	YPL137C	UTP22	P53254	1237 aa	Predicted RBP	2.74	□□□□□ -1.97
GIP3	YPL137C	PUF6	Q04373	656 aa	Known RBP	2.74	□□□□□ -1.97
GIP3	YPL137C	UTP13	Q05946	817 aa	Known RBP	2.74	□□□□□ -1.97
GIP3	YPL137C	SAM3	Q08986	587 aa		2.74	□□□□□ -1.97
GIP3	YPL137C	ATG32	P40458	529 aa		2.74	□□□□□ -1.97
GIP3	YPL137C	PEX21	P50091	288 aa		2.74	□□□□□ -1.97
GIP3	YPL137C	YLR326W	Q06170	240 aa	Known RBP	2.74	□□□□□ -1.97
GIP3	YPL137C	SSM4	P40318	1319 aa		2.74	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms