RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C MCM16Q12262 181 aa6.88□□□□□ -1.31
NUP1YOR098C PNP1Q05788 311 aa6.87□□□□□ -1.31
NUP1YOR098C YJR142WP47173 342 aa6.87□□□□□ -1.31
NUP1YOR098C SIT4P20604 311 aa6.86□□□□□ -1.31
NUP1YOR098C SPR28Q04921 423 aa6.86□□□□□ -1.31
NUP1YOR098C PIN2Q12057 282 aa6.86□□□□□ -1.31
NUP1YOR098C MCM2P29469 868 aa6.86□□□□□ -1.31
NUP1YOR098C MAD1P40957 749 aa6.86□□□□□ -1.31
NUP1YOR098C CDC53Q12018 815 aaKnown RBP6.86□□□□□ -1.31
NUP1YOR098C RPA135P22138 1203 aaKnown RBP6.85□□□□□ -1.31
NUP1YOR098C MNN1P39106 762 aa6.85□□□□□ -1.31
NUP1YOR098C QDR1P40475 563 aa6.85□□□□□ -1.31
NUP1YOR098C PUF6Q04373 656 aaKnown RBP6.85□□□□□ -1.31
NUP1YOR098C STI1P15705 589 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
NUP1YOR098C GLO3P38682 493 aaKnown RBP6.85□□□□□ -1.31
NUP1YOR098C YGR161W-CQ3E744 92 aa6.85□□□□□ -1.31
NUP1YOR098C GAP1P19145 602 aaPredicted RBP6.84□□□□□ -1.31
NUP1YOR098C GAL11P19659 1081 aa6.84□□□□□ -1.31
NUP1YOR098C YPR109WQ06104 294 aa6.84□□□□□ -1.31
NUP1YOR098C YDL121CQ07541 149 aa6.84□□□□□ -1.31
NUP1YOR098C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
NUP1YOR098C ISF1P32488 338 aa6.84□□□□□ -1.31
NUP1YOR098C VMA1P17255 1071 aaKnown RBP6.84□□□□□ -1.32
NUP1YOR098C YJL049WP47048 450 aa6.84□□□□□ -1.32
NUP1YOR098C BDF2Q07442 638 aa6.83□□□□□ -1.32
NUP1YOR098C ACF4P47129 309 aa6.83□□□□□ -1.32
NUP1YOR098C WRS1Q12109 432 aaKnown RBP6.83□□□□□ -1.32
NUP1YOR098C KIP3P53086 805 aaKnown RBP6.82□□□□□ -1.32
NUP1YOR098C NAF1P53919 492 aaKnown RBP6.82□□□□□ -1.32
NUP1YOR098C PIB1Q06651 286 aa6.82□□□□□ -1.32
NUP1YOR098C BRE1Q07457 700 aaKnown RBP6.82□□□□□ -1.32
NUP1YOR098C AIM21P40563 679 aa6.82□□□□□ -1.32
NUP1YOR098C MTO1P53070 669 aa6.82□□□□□ -1.32
NUP1YOR098C ECM16Q04217 1267 aaKnown RBP6.82□□□□□ -1.32
NUP1YOR098C MIP1P15801 1254 aa6.82□□□□□ -1.32
NUP1YOR098C NOP2P40991 618 aaKnown RBP6.82□□□□□ -1.32
NUP1YOR098C UBP12P39538 1254 aa6.81□□□□□ -1.32
NUP1YOR098C FUR4P05316 633 aaKnown RBP6.81□□□□□ -1.32
NUP1YOR098C ROM1P53046 1155 aa6.81□□□□□ -1.32
NUP1YOR098C ENV9Q08651 330 aa6.81□□□□□ -1.32
NUP1YOR098C YGL081WP53156 320 aa6.8□□□□□ -1.32
NUP1YOR098C TY4A-JP47023 414 aa6.8□□□□□ -1.32
NUP1YOR098C MET6P05694 767 aaKnown RBP6.79□□□□□ -1.32
NUP1YOR098C SLY41P22215 453 aa6.79□□□□□ -1.32
NUP1YOR098C PHO87P25360 923 aa6.79□□□□□ -1.32
NUP1YOR098C YEN1P40028 759 aa6.79□□□□□ -1.32
NUP1YOR098C ACS2P52910 683 aaKnown RBP6.79□□□□□ -1.32
NUP1YOR098C PUN1Q06991 263 aa6.79□□□□□ -1.32
NUP1YOR098C YOR131CQ12486 218 aa6.79□□□□□ -1.32
NUP1YOR098C VMA4P22203 233 aaKnown RBP6.79□□□□□ -1.32
NUP1YOR098C SEC6P32844 805 aa6.79□□□□□ -1.32
NUP1YOR098C GRX7P38068 203 aa6.79□□□□□ -1.32
NUP1YOR098C PRY3P47033 881 aa6.79□□□□□ -1.32
NUP1YOR098C DNM1P54861 757 aa6.79□□□□□ -1.32
NUP1YOR098C RPT1P33299 467 aaKnown RBP6.78□□□□□ -1.32
NUP1YOR098C ENP1P38333 483 aaKnown RBP6.78□□□□□ -1.32
NUP1YOR098C BOI2P39969 1040 aa6.78□□□□□ -1.32
NUP1YOR098C SRS2P12954 1174 aa6.78□□□□□ -1.32
NUP1YOR098C NST1P53935 1240 aa6.78□□□□□ -1.32
NUP1YOR098C GPI13Q07830 1017 aa6.78□□□□□ -1.32
NUP1YOR098C CLN2P20438 545 aa6.78□□□□□ -1.32
NUP1YOR098C EMP47P43555 445 aa6.78□□□□□ -1.32
NUP1YOR098C KAR1P11927 433 aa6.77□□□□□ -1.33
NUP1YOR098C CSC1Q06538 782 aa6.77□□□□□ -1.33
NUP1YOR098C TAT2P38967 592 aa6.77□□□□□ -1.33
NUP1YOR098C ERP2P39704 215 aa6.77□□□□□ -1.33
NUP1YOR098C MPE1P35728 441 aaKnown RBP6.76□□□□□ -1.33
NUP1YOR098C BOI1P38041 980 aaKnown RBP6.76□□□□□ -1.33
NUP1YOR098C ILV3P39522 585 aaKnown RBP6.76□□□□□ -1.33
NUP1YOR098C ESF1Q06344 628 aaKnown RBP6.76□□□□□ -1.33
NUP1YOR098C TRM1P15565 570 aaKnown RBP6.76□□□□□ -1.33
NUP1YOR098C MAP2P38174 421 aaKnown RBP6.76□□□□□ -1.33
NUP1YOR098C NUP82P40368 713 aa6.76□□□□□ -1.33
NUP1YOR098C YOL036WQ08206 761 aa6.76□□□□□ -1.33
NUP1YOR098C PHO4P07270 312 aaKnown RBP6.76□□□□□ -1.33
NUP1YOR098C KRI1P42846 591 aaKnown RBP6.76□□□□□ -1.33
NUP1YOR098C HUL5P53119 910 aa6.76□□□□□ -1.33
NUP1YOR098C PPM2Q08282 695 aa6.76□□□□□ -1.33
NUP1YOR098C ISW1P38144 1129 aa6.75□□□□□ -1.33
NUP1YOR098C FUI1P38196 639 aa6.75□□□□□ -1.33
NUP1YOR098C TMA64Q04600 565 aaKnown RBP6.75□□□□□ -1.33
NUP1YOR098C TCB3Q03640 1545 aaKnown RBP6.75□□□□□ -1.33
NUP1YOR098C SWR1Q05471 1514 aa6.75□□□□□ -1.33
NUP1YOR098C HAP4P14064 554 aa6.75□□□□□ -1.33
NUP1YOR098C NSR1P27476 414 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
NUP1YOR098C MSH4P40965 878 aaPredicted RBP6.75□□□□□ -1.33
NUP1YOR098C PEP7P32609 515 aa6.74□□□□□ -1.33
NUP1YOR098C RMD1Q03441 430 aa6.74□□□□□ -1.33
NUP1YOR098C RTF1P53064 558 aa6.74□□□□□ -1.33
NUP1YOR098C TIM23P32897 222 aa6.73□□□□□ -1.33
NUP1YOR098C DAK2P43550 591 aa6.73□□□□□ -1.33
NUP1YOR098C TY1B-DR4Q07793 1604 aa6.73□□□□□ -1.33
NUP1YOR098C MNN4P36044 1178 aa6.73□□□□□ -1.33
NUP1YOR098C RPS26AP39938 119 aaKnown RBP6.73□□□□□ -1.33
NUP1YOR098C RPS26BP39939 119 aaKnown RBP6.73□□□□□ -1.33
NUP1YOR098C RTT106P40161 455 aa6.73□□□□□ -1.33
NUP1YOR098C GRX1P25373 110 aaKnown RBP6.72□□□□□ -1.33
NUP1YOR098C UTP14Q04500 899 aaKnown RBP6.72□□□□□ -1.33
NUP1YOR098C DNA2P38859 1522 aa6.72□□□□□ -1.33
NUP1YOR098C SVL3Q03088 825 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms