RNA–Protein interactions for RNA: YOR076C

SKI7, Transcript of Coupling protein for the Ski complex and cytoplasmic exosome, yeastyeast

Gene SKI7, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI7YOR076C YDR215CQ12240 137 aa1.93□□□□□ -2.1
SKI7YOR076C CDC19P00549 500 aaKnown RBP1.92□□□□□ -2.1
SKI7YOR076C INP52P50942 1183 aa1.92□□□□□ -2.1
SKI7YOR076C PDC1P06169 563 aaKnown RBP1.91□□□□□ -2.1
SKI7YOR076C SLN1P39928 1220 aaPredicted RBP1.91□□□□□ -2.1
SKI7YOR076C LSB6P42951 607 aa1.91□□□□□ -2.1
SKI7YOR076C KXD1P53158 218 aa1.91□□□□□ -2.1
SKI7YOR076C CUZ1P53899 274 aa1.91□□□□□ -2.1
SKI7YOR076C ALO1P54783 526 aaKnown RBP1.89□□□□□ -2.11
SKI7YOR076C ADE12P80210 433 aaKnown RBP1.89□□□□□ -2.11
SKI7YOR076C YBL086CP38177 466 aa1.89□□□□□ -2.11
SKI7YOR076C AVT1P47082 602 aa1.89□□□□□ -2.11
SKI7YOR076C KIP2P28743 706 aa1.88□□□□□ -2.11
SKI7YOR076C IXR1P33417 597 aa1.87□□□□□ -2.11
SKI7YOR076C CEM1P39525 442 aa1.87□□□□□ -2.11
SKI7YOR076C SYT1Q06836 1226 aa1.87□□□□□ -2.11
SKI7YOR076C RTF1P53064 558 aa1.86□□□□□ -2.11
SKI7YOR076C OMA1P36163 345 aa1.86□□□□□ -2.11
SKI7YOR076C IFH1P39520 1085 aa1.86□□□□□ -2.11
SKI7YOR076C YNR014WP53719 212 aa1.85□□□□□ -2.11
SKI7YOR076C SET1P38827 1080 aaKnown RBP1.83□□□□□ -2.12
SKI7YOR076C YNL115CP53925 644 aa1.83□□□□□ -2.12
SKI7YOR076C AOS1Q06624 347 aa1.83□□□□□ -2.12
SKI7YOR076C TAT1P38085 619 aa1.81□□□□□ -2.12
SKI7YOR076C BOI2P39969 1040 aa1.81□□□□□ -2.12
SKI7YOR076C VTC4P47075 721 aa1.81□□□□□ -2.12
SKI7YOR076C ELM1P32801 640 aa1.81□□□□□ -2.12
SKI7YOR076C YDR461C-AQ2V2P7 80 aa1.81□□□□□ -2.12
SKI7YOR076C DIT1P21623 536 aa1.8□□□□□ -2.12
SKI7YOR076C GPM1P00950 247 aaKnown RBP1.79□□□□□ -2.12
SKI7YOR076C YPR097WQ06839 1073 aa1.79□□□□□ -2.12
SKI7YOR076C SIT4P20604 311 aa1.79□□□□□ -2.12
SKI7YOR076C PRY1P47032 299 aa1.79□□□□□ -2.12
SKI7YOR076C RPA14P50106 137 aa1.79□□□□□ -2.12
SKI7YOR076C REF2P42073 533 aaPredicted RBP1.78□□□□□ -2.12
SKI7YOR076C ALR1Q08269 859 aa1.78□□□□□ -2.12
SKI7YOR076C YMR265CQ03508 461 aaKnown RBP1.78□□□□□ -2.13
SKI7YOR076C KRE33P53914 1056 aaKnown RBP1.77□□□□□ -2.13
SKI7YOR076C COX6P00427 148 aa1.76□□□□□ -2.13
SKI7YOR076C EMW1P42842 904 aaKnown RBP1.76□□□□□ -2.13
SKI7YOR076C APP1P53933 587 aa1.76□□□□□ -2.13
SKI7YOR076C YDL206WQ12424 762 aa1.76□□□□□ -2.13
SKI7YOR076C VAC17P25591 423 aa1.75□□□□□ -2.13
SKI7YOR076C DAL1P32375 460 aa1.75□□□□□ -2.13
SKI7YOR076C ITT1Q04638 464 aa1.75□□□□□ -2.13
SKI7YOR076C YCR015CP25616 317 aa1.74□□□□□ -2.13
SKI7YOR076C NAF1P53919 492 aaKnown RBP1.74□□□□□ -2.13
SKI7YOR076C UBP5P39944 805 aa1.74□□□□□ -2.13
SKI7YOR076C DFG5Q05031 458 aa1.74□□□□□ -2.13
SKI7YOR076C MAK21Q12176 1025 aaKnown RBP1.73□□□□□ -2.13
SKI7YOR076C CLB5P30283 435 aa1.72□□□□□ -2.13
SKI7YOR076C PGM1P33401 570 aaKnown RBP1.72□□□□□ -2.13
SKI7YOR076C MET1P36150 593 aa1.72□□□□□ -2.13
SKI7YOR076C YKR073CP36153 106 aa1.72□□□□□ -2.13
SKI7YOR076C UBP15P50101 1230 aa1.72□□□□□ -2.13
SKI7YOR076C CTH1P47976 325 aa1.71□□□□□ -2.14
SKI7YOR076C PDC5P16467 563 aaKnown RBP1.7□□□□□ -2.14
SKI7YOR076C PSE1P32337 1089 aaKnown RBP1.7□□□□□ -2.14
SKI7YOR076C SLA1P32790 1244 aa1.7□□□□□ -2.14
SKI7YOR076C KNS1P32350 737 aaPredicted RBP1.7□□□□□ -2.14
SKI7YOR076C MKS1P34072 584 aa1.7□□□□□ -2.14
SKI7YOR076C TRP3P00937 484 aa1.69□□□□□ -2.14
SKI7YOR076C SLY41P22215 453 aa1.69□□□□□ -2.14
SKI7YOR076C YPT53P36019 220 aa1.69□□□□□ -2.14
SKI7YOR076C PUS6P53294 404 aa1.69□□□□□ -2.14
SKI7YOR076C NIS1P53939 407 aa1.69□□□□□ -2.14
SKI7YOR076C TY1A-DR3Q12441 440 aa1.69□□□□□ -2.14
SKI7YOR076C RNQ1P25367 405 aa1.68□□□□□ -2.14
SKI7YOR076C YKL222CP35995 705 aa1.68□□□□□ -2.14
SKI7YOR076C STE6P12866 1290 aa1.68□□□□□ -2.14
SKI7YOR076C BDS1Q08347 646 aa1.68□□□□□ -2.14
SKI7YOR076C BUD9P53226 547 aa1.67□□□□□ -2.14
SKI7YOR076C TBF1Q02457 562 aa1.67□□□□□ -2.14
SKI7YOR076C TRM1P15565 570 aaKnown RBP1.67□□□□□ -2.14
SKI7YOR076C TPS3P38426 1054 aaKnown RBP1.66□□□□□ -2.14
SKI7YOR076C YPR148CQ06523 435 aa1.66□□□□□ -2.14
SKI7YOR076C MED7Q08278 222 aa1.66□□□□□ -2.14
SKI7YOR076C TAD3Q9URQ3 322 aa1.66□□□□□ -2.14
SKI7YOR076C PUB1P32588 453 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SKI7YOR076C LIP5P32875 414 aa1.66□□□□□ -2.14
SKI7YOR076C FBP26P32604 452 aa1.65□□□□□ -2.15
SKI7YOR076C BUB1P41695 1021 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
SKI7YOR076C FPS1P23900 669 aa1.64□□□□□ -2.15
SKI7YOR076C TAF1P46677 1066 aa1.64□□□□□ -2.15
SKI7YOR076C TOS1P38288 455 aa1.64□□□□□ -2.15
SKI7YOR076C BRE4Q07660 1125 aa1.64□□□□□ -2.15
SKI7YOR076C SSN3P39073 555 aa1.63□□□□□ -2.15
SKI7YOR076C AI3P03877 415 aa1.63□□□□□ -2.15
SKI7YOR076C MSN5P52918 1224 aa1.63□□□□□ -2.15
SKI7YOR076C TY1A-DR2Q03964 440 aaKnown RBP1.63□□□□□ -2.15
SKI7YOR076C ESC8Q08119 714 aa1.63□□□□□ -2.15
SKI7YOR076C FPK1P53739 893 aa1.62□□□□□ -2.15
SKI7YOR076C MAG2Q06436 670 aaKnown RBP1.62□□□□□ -2.15
SKI7YOR076C YLR122CQ12312 125 aa1.62□□□□□ -2.15
SKI7YOR076C TEA1P47988 759 aa1.6□□□□□ -2.15
SKI7YOR076C KAE1P36132 386 aa1.59□□□□□ -2.15
SKI7YOR076C GIP4P39732 760 aa1.59□□□□□ -2.15
SKI7YOR076C ARI1P53111 347 aaKnown RBP1.59□□□□□ -2.15
SKI7YOR076C GAS5Q08193 484 aa1.59□□□□□ -2.15
SKI7YOR076C SEG2P34250 1132 aa1.59□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms