RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	SIS2	P36024	562 aa		4.84	□□□□□ -1.64
FRE4	YNR060W	YML082W	Q04533	649 aa	Known RBP	4.84	□□□□□ -1.64
FRE4	YNR060W	PUS6	P53294	404 aa		4.83	□□□□□ -1.64
FRE4	YNR060W	URN1	Q06525	465 aa	Known RBP	4.83	□□□□□ -1.64
FRE4	YNR060W	RDS2	P19541	446 aa	Known RBP	4.82	□□□□□ -1.64
FRE4	YNR060W	PAC1	P39946	494 aa	Known RBP	4.82	□□□□□ -1.64
FRE4	YNR060W	SPT5	P27692	1063 aa	Known RBP	4.81	□□□□□ -1.64
FRE4	YNR060W	STM1	P39015	273 aa	Known RBP	4.81	□□□□□ -1.64
FRE4	YNR060W	TRL1	P09880	827 aa	Known RBP	4.8	□□□□□ -1.64
FRE4	YNR060W	ATE1	P16639	503 aa		4.8	□□□□□ -1.64
FRE4	YNR060W	PTC2	P39966	464 aa	Known RBP	4.8	□□□□□ -1.64
FRE4	YNR060W	YDL206W	Q12424	762 aa		4.8	□□□□□ -1.64
FRE4	YNR060W	YBL113C	Q7M4S9	792 aa		4.8	□□□□□ -1.64
FRE4	YNR060W	GCD11	P32481	527 aa	Known RBP	4.8	□□□□□ -1.64
FRE4	YNR060W	ERP5	P38819	212 aa		4.8	□□□□□ -1.64
FRE4	YNR060W	DOS2	P54858	310 aa		4.8	□□□□□ -1.64
FRE4	YNR060W	YPR084W	Q06821	456 aa		4.8	□□□□□ -1.64
FRE4	YNR060W	MSC6	Q08818	692 aa	Known RBP	4.8	□□□□□ -1.64
FRE4	YNR060W	NPL4	P33755	580 aa		4.79	□□□□□ -1.64
FRE4	YNR060W	SPC42	P36094	363 aa		4.79	□□□□□ -1.64
FRE4	YNR060W	TPS3	P38426	1054 aa	Known RBP	4.79	□□□□□ -1.64
FRE4	YNR060W	NAF1	P53919	492 aa	Known RBP	4.79	□□□□□ -1.64
FRE4	YNR060W	ITT1	Q04638	464 aa		4.79	□□□□□ -1.64
FRE4	YNR060W	YPR097W	Q06839	1073 aa		4.79	□□□□□ -1.64
FRE4	YNR060W	ASF1	P32447	279 aa		4.78	□□□□□ -1.64
FRE4	YNR060W	PRT1	P06103	763 aa	Known RBP	4.78	□□□□□ -1.64
FRE4	YNR060W	MOD5	P07884	428 aa		4.78	□□□□□ -1.64
FRE4	YNR060W	BCK2	P33306	851 aa		4.78	□□□□□ -1.64
FRE4	YNR060W	RPA14	P50106	137 aa		4.78	□□□□□ -1.64
FRE4	YNR060W	PDC1	P06169	563 aa	Known RBP	4.77	□□□□□ -1.65
FRE4	YNR060W	SEC20	P28791	383 aa		4.77	□□□□□ -1.65
FRE4	YNR060W	WHI5	Q12416	295 aa		4.77	□□□□□ -1.65
FRE4	YNR060W	SDH2	P21801	266 aa		4.77	□□□□□ -1.65
FRE4	YNR060W	VRP1	P37370	817 aa		4.77	□□□□□ -1.65
FRE4	YNR060W	MDJ2	P42834	146 aa		4.77	□□□□□ -1.65
FRE4	YNR060W	BRN1	P38170	754 aa		4.76	□□□□□ -1.65
FRE4	YNR060W	FAR11	P53917	953 aa		4.76	□□□□□ -1.65
FRE4	YNR060W	ECM23	Q02710	187 aa		4.76	□□□□□ -1.65
FRE4	YNR060W	MCM16	Q12262	181 aa		4.76	□□□□□ -1.65
FRE4	YNR060W	RRN7	P40992	514 aa		4.75	□□□□□ -1.65
FRE4	YNR060W	FIG4	P42837	879 aa		4.75	□□□□□ -1.65
FRE4	YNR060W	APL6	P46682	809 aa		4.75	□□□□□ -1.65
FRE4	YNR060W	STB3	Q12427	513 aa		4.75	□□□□□ -1.65
FRE4	YNR060W	TPD3	P31383	635 aa		4.75	□□□□□ -1.65
FRE4	YNR060W	CWC15	Q03772	175 aa	Known RBP	4.75	□□□□□ -1.65
FRE4	YNR060W	YHL050C	P38721	697 aa		4.74	□□□□□ -1.65
FRE4	YNR060W	YHR219W	P38900	624 aa		4.74	□□□□□ -1.65
FRE4	YNR060W	TBF1	Q02457	562 aa		4.74	□□□□□ -1.65
FRE4	YNR060W	YEL077C	Q3E7X8	1277 aa		4.74	□□□□□ -1.65
FRE4	YNR060W	POL32	P47110	350 aa		4.74	□□□□□ -1.65
FRE4	YNR060W	FRA1	Q07825	749 aa		4.74	□□□□□ -1.65
FRE4	YNR060W	GAL2	P13181	574 aa		4.73	□□□□□ -1.65
FRE4	YNR060W	PPX1	P38698	397 aa		4.73	□□□□□ -1.65
FRE4	YNR060W	HXT10	P43581	546 aa		4.73	□□□□□ -1.65
FRE4	YNR060W	ALD4	P46367	519 aa	Known RBP	4.73	□□□□□ -1.65
FRE4	YNR060W	ATG36	P46983	293 aa		4.73	□□□□□ -1.65
FRE4	YNR060W	ISF1	P32488	338 aa		4.72	□□□□□ -1.65
FRE4	YNR060W	XDJ1	P39102	459 aa		4.72	□□□□□ -1.65
FRE4	YNR060W	SVF1	Q05515	481 aa		4.72	□□□□□ -1.65
FRE4	YNR060W	MAG2	Q06436	670 aa	Known RBP	4.72	□□□□□ -1.65
FRE4	YNR060W	RRD1	P40454	393 aa	Known RBP	4.72	□□□□□ -1.65
FRE4	YNR060W	ALR1	Q08269	859 aa		4.72	□□□□□ -1.65
FRE4	YNR060W	UBX7	P38349	436 aa		4.71	□□□□□ -1.65
FRE4	YNR060W	KTR7	P40504	517 aa		4.71	□□□□□ -1.65
FRE4	YNR060W	CST6	P40535	587 aa		4.71	□□□□□ -1.65
FRE4	YNR060W	YPP1	P46951	817 aa		4.71	□□□□□ -1.65
FRE4	YNR060W	FPR4	Q06205	392 aa	Predicted RBP	4.71	□□□□□ -1.65
FRE4	YNR060W	TOP1	P04786	769 aa		4.71	□□□□□ -1.66
FRE4	YNR060W	VAC17	P25591	423 aa		4.71	□□□□□ -1.66
FRE4	YNR060W	EMP47	P43555	445 aa		4.71	□□□□□ -1.66
FRE4	YNR060W	KAR5	Q04746	504 aa		4.71	□□□□□ -1.66
FRE4	YNR060W	TEC1	P18412	486 aa		4.7	□□□□□ -1.66
FRE4	YNR060W	SEC8	P32855	1065 aa		4.7	□□□□□ -1.66
FRE4	YNR060W	BOL3	P39724	118 aa		4.7	□□□□□ -1.66
FRE4	YNR060W	NNF1	P47149	201 aa		4.7	□□□□□ -1.66
FRE4	YNR060W	YJR107W	P47145	328 aa		4.7	□□□□□ -1.66
FRE4	YNR060W	YAF9	P53930	226 aa		4.7	□□□□□ -1.66
FRE4	YNR060W	SAS4	Q04003	481 aa		4.7	□□□□□ -1.66
FRE4	YNR060W	GRS1	P38088	690 aa	Known RBP	4.69	□□□□□ -1.66
FRE4	YNR060W	ATG1	P53104	897 aa		4.68	□□□□□ -1.66
FRE4	YNR060W	KXD1	P53158	218 aa		4.68	□□□□□ -1.66
FRE4	YNR060W	OYE2	Q03558	400 aa	Known RBP	4.68	□□□□□ -1.66
FRE4	YNR060W	NMD2	P38798	1089 aa	Known RBP	4.68	□□□□□ -1.66
FRE4	YNR060W	PUF6	Q04373	656 aa	Known RBP	4.68	□□□□□ -1.66
FRE4	YNR060W	FRT1	Q99332	602 aa		4.68	□□□□□ -1.66
FRE4	YNR060W	MET4	P32389	672 aa		4.67	□□□□□ -1.66
FRE4	YNR060W	ROM1	P53046	1155 aa		4.67	□□□□□ -1.66
FRE4	YNR060W	GYP1	Q08484	637 aa		4.67	□□□□□ -1.66
FRE4	YNR060W	GUT2	P32191	649 aa		4.67	□□□□□ -1.66
FRE4	YNR060W	SPT16	P32558	1035 aa	Known RBP	4.67	□□□□□ -1.66
FRE4	YNR060W	NUT2	Q06213	157 aa		4.67	□□□□□ -1.66
FRE4	YNR060W	STE20	Q03497	939 aa	Known RBP	4.66	□□□□□ -1.66
FRE4	YNR060W	PNP1	Q05788	311 aa		4.66	□□□□□ -1.66
FRE4	YNR060W	HAL5	P38970	855 aa	Known RBP	4.65	□□□□□ -1.66
FRE4	YNR060W	ACS2	P52910	683 aa	Known RBP	4.65	□□□□□ -1.66
FRE4	YNR060W	YOL098C	Q12496	1037 aa		4.65	□□□□□ -1.66
FRE4	YNR060W	PHO87	P25360	923 aa		4.65	□□□□□ -1.67
FRE4	YNR060W	PAT1	P25644	796 aa	Known RBP	4.65	□□□□□ -1.67
FRE4	YNR060W	MET1	P36150	593 aa		4.65	□□□□□ -1.67
FRE4	YNR060W	UTP13	Q05946	817 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms