RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A VPS27P40343 622 aaKnown RBP16.14■□□□□ 0.17
LSM3YLR438C-A YNL050CP53952 270 aa16.13■□□□□ 0.17
LSM3YLR438C-A BUD31P25337 157 aaPredicted RBP16.12■□□□□ 0.17
LSM3YLR438C-A THI22Q06490 572 aa16.12■□□□□ 0.17
LSM3YLR438C-A ZDS1P50111 915 aaKnown RBP16.11■□□□□ 0.17
LSM3YLR438C-A CDC45Q08032 650 aa16.11■□□□□ 0.17
LSM3YLR438C-A PRI1P10363 409 aa16.1■□□□□ 0.17
LSM3YLR438C-A KCC4P25389 1037 aa16.1■□□□□ 0.17
LSM3YLR438C-A YKR075CP36155 307 aa16.1■□□□□ 0.17
LSM3YLR438C-A YBP2P53169 641 aa16.1■□□□□ 0.17
LSM3YLR438C-A NUP145P49687 1317 aa16.1■□□□□ 0.17
LSM3YLR438C-A EDE1P34216 1381 aa16.1■□□□□ 0.17
LSM3YLR438C-A TPD3P31383 635 aa16.09■□□□□ 0.17
LSM3YLR438C-A SAP155P43612 1002 aa16.09■□□□□ 0.17
LSM3YLR438C-A MAM1P40065 302 aa16.07■□□□□ 0.16
LSM3YLR438C-A NSE3Q05541 303 aa16.07■□□□□ 0.16
LSM3YLR438C-A UGA3P26370 528 aa16.06■□□□□ 0.16
LSM3YLR438C-A PRS1P32895 427 aaKnown RBP16.06■□□□□ 0.16
LSM3YLR438C-A RTT109Q07794 436 aa16.06■□□□□ 0.16
LSM3YLR438C-A NPR2P39923 615 aa16.04■□□□□ 0.16
LSM3YLR438C-A SUI2P20459 304 aaKnown RBP16.03■□□□□ 0.16
LSM3YLR438C-A GRX1P25373 110 aaKnown RBP16.03■□□□□ 0.16
LSM3YLR438C-A RRT14P40470 206 aa16.03■□□□□ 0.16
LSM3YLR438C-A GYP7P48365 746 aa16.02■□□□□ 0.16
LSM3YLR438C-A MSB4Q12317 492 aa16.01■□□□□ 0.15
LSM3YLR438C-A RMT2Q03305 412 aa16■□□□□ 0.15
LSM3YLR438C-A RVB2Q12464 471 aaKnown RBP16■□□□□ 0.15
LSM3YLR438C-A YBR287WP38355 427 aa15.99■□□□□ 0.15
LSM3YLR438C-A HEF3P53978 1044 aaKnown RBP15.99■□□□□ 0.15
LSM3YLR438C-A ALE1Q08548 619 aa15.99■□□□□ 0.15
LSM3YLR438C-A BMS1Q08965 1183 aaKnown RBP15.98■□□□□ 0.15
LSM3YLR438C-A LYS4P49367 693 aaPredicted RBP15.97■□□□□ 0.15
LSM3YLR438C-A YRB30P53107 440 aaPredicted RBP15.97■□□□□ 0.15
LSM3YLR438C-A COQ4O13525 335 aa15.93■□□□□ 0.14
LSM3YLR438C-A YFR016CP43597 1233 aaKnown RBP15.93■□□□□ 0.14
LSM3YLR438C-A ALD2P47771 506 aa15.93■□□□□ 0.14
LSM3YLR438C-A TUM1Q08686 304 aaKnown RBP15.93■□□□□ 0.14
LSM3YLR438C-A NOP53Q12080 455 aaKnown RBP15.93■□□□□ 0.14
LSM3YLR438C-A GRE2Q12068 342 aaKnown RBP15.91■□□□□ 0.14
LSM3YLR438C-A MAK21Q12176 1025 aaKnown RBP15.91■□□□□ 0.14
LSM3YLR438C-A RAD4P14736 754 aa15.9■□□□□ 0.14
LSM3YLR438C-A UGA2P38067 497 aa15.9■□□□□ 0.14
LSM3YLR438C-A GTT3P39996 337 aa15.9■□□□□ 0.14
LSM3YLR438C-A YBL086CP38177 466 aa15.89■□□□□ 0.13
LSM3YLR438C-A MDG1P53885 366 aa15.89■□□□□ 0.13
LSM3YLR438C-A SRT1Q03175 343 aa15.88■□□□□ 0.13
LSM3YLR438C-A BUG1Q12191 341 aa15.88■□□□□ 0.13
LSM3YLR438C-A LYS2P07702 1392 aa15.87■□□□□ 0.13
LSM3YLR438C-A SSP2Q08646 371 aa15.87■□□□□ 0.13
LSM3YLR438C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data15.86■□□□□ 0.13not detected
LSM3YLR438C-A YOL057WQ08225 711 aa15.86■□□□□ 0.13
LSM3YLR438C-A BDF1P35817 686 aa15.85■□□□□ 0.13
LSM3YLR438C-A BUD27P43573 796 aaKnown RBP RIP-Chip data15.85■□□□□ 0.13not detected
LSM3YLR438C-A RAD2P07276 1031 aa15.83■□□□□ 0.12
LSM3YLR438C-A SSA2P10592 639 aaKnown RBP15.83■□□□□ 0.12
LSM3YLR438C-A ALD3P54114 506 aa15.83■□□□□ 0.12
LSM3YLR438C-A PHM7Q12252 991 aa15.83■□□□□ 0.12
LSM3YLR438C-A TEA1P47988 759 aa15.82■□□□□ 0.12
LSM3YLR438C-A CTH1P47976 325 aa15.81■□□□□ 0.12
LSM3YLR438C-A DAL5P15365 543 aa15.8■□□□□ 0.12
LSM3YLR438C-A SER1P33330 395 aaKnown RBP15.8■□□□□ 0.12
LSM3YLR438C-A RPG1P38249 964 aaKnown RBP15.8■□□□□ 0.12
LSM3YLR438C-A FUN12P39730 1002 aaKnown RBP15.8■□□□□ 0.12
LSM3YLR438C-A ZDS2P54786 942 aa15.8■□□□□ 0.12
LSM3YLR438C-A VPS64Q03944 604 aa15.8■□□□□ 0.12
LSM3YLR438C-A NOP8Q08287 484 aaPredicted RBP15.79■□□□□ 0.12
LSM3YLR438C-A RIM15P43565 1770 aa15.78■□□□□ 0.12
LSM3YLR438C-A UTP22P53254 1237 aaPredicted RBP15.78■□□□□ 0.12
LSM3YLR438C-A DNM1P54861 757 aa15.78■□□□□ 0.12
LSM3YLR438C-A NYV1Q12255 253 aa15.78■□□□□ 0.12
LSM3YLR438C-A TFA1P36100 482 aa15.77■□□□□ 0.12
LSM3YLR438C-A YGL082WP53155 381 aa15.76■□□□□ 0.11
LSM3YLR438C-A YIL092WP40497 633 aa15.75■□□□□ 0.11
LSM3YLR438C-A MRP7P12687 371 aa15.74■□□□□ 0.11
LSM3YLR438C-A APL2P36000 726 aaPredicted RBP15.74■□□□□ 0.11
LSM3YLR438C-A YPP1P46951 817 aa15.74■□□□□ 0.11
LSM3YLR438C-A HPC2Q01448 625 aa15.74■□□□□ 0.11
LSM3YLR438C-A CST6P40535 587 aa15.73■□□□□ 0.11
LSM3YLR438C-A PKH1Q03407 766 aa15.71■□□□□ 0.11
LSM3YLR438C-A NUP133P36161 1157 aa15.7■□□□□ 0.1
LSM3YLR438C-A YDR306CQ06640 478 aa15.7■□□□□ 0.1
LSM3YLR438C-A FPR3P38911 411 aaKnown RBP15.69■□□□□ 0.1
LSM3YLR438C-A CTI6Q08923 506 aa15.69■□□□□ 0.1
LSM3YLR438C-A YPR204WQ08995 1032 aa15.69■□□□□ 0.1
LSM3YLR438C-A LPD1P09624 499 aaKnown RBP15.68■□□□□ 0.1
LSM3YLR438C-A ARG8P18544 423 aa15.68■□□□□ 0.1
LSM3YLR438C-A CSI1Q04368 295 aa15.68■□□□□ 0.1
LSM3YLR438C-A TOS1P38288 455 aa15.66■□□□□ 0.1
LSM3YLR438C-A YLR271WQ06152 274 aa15.66■□□□□ 0.1
LSM3YLR438C-A SWI1P09547 1314 aa15.66■□□□□ 0.1
LSM3YLR438C-A YGR122WP53272 402 aa15.65■□□□□ 0.1
LSM3YLR438C-A DCD1P06773 312 aa15.64■□□□□ 0.09
LSM3YLR438C-A RAD24P32641 659 aa15.64■□□□□ 0.09
LSM3YLR438C-A RAT1Q02792 1006 aaKnown RBP15.64■□□□□ 0.09
LSM3YLR438C-A TRP5P00931 707 aaKnown RBP15.63■□□□□ 0.09
LSM3YLR438C-A YJR008WP47085 338 aa15.63■□□□□ 0.09
LSM3YLR438C-A RPS19AP07280 144 aaKnown RBP15.62■□□□□ 0.09
LSM3YLR438C-A RPS19BP07281 144 aaPredicted RBP15.62■□□□□ 0.09
LSM3YLR438C-A RIX7Q07844 837 aaKnown RBP15.62■□□□□ 0.09
LSM3YLR438C-A SWC3P31376 625 aa15.61■□□□□ 0.09
Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms