RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C YDJ1P25491 409 aaKnown RBP9.16□□□□□ -0.94
NMD4YLR363C GUT2P32191 649 aa9.16□□□□□ -0.94
NMD4YLR363C SUP45P12385 437 aaKnown RBP9.15□□□□□ -0.94
NMD4YLR363C YNL108CP53929 270 aa9.15□□□□□ -0.94
NMD4YLR363C YPR084WQ06821 456 aa9.15□□□□□ -0.94
NMD4YLR363C RPL34BP40525 121 aaKnown RBP9.14□□□□□ -0.95
NMD4YLR363C STE20Q03497 939 aaKnown RBP9.14□□□□□ -0.95
NMD4YLR363C MET32Q12041 191 aa9.14□□□□□ -0.95
NMD4YLR363C ATG32P40458 529 aa9.13□□□□□ -0.95
NMD4YLR363C FRA1Q07825 749 aa9.13□□□□□ -0.95
NMD4YLR363C MCM16Q12262 181 aa9.13□□□□□ -0.95
NMD4YLR363C INO80P53115 1489 aa9.13□□□□□ -0.95
NMD4YLR363C MON2P48563 1636 aaPredicted RBP9.13□□□□□ -0.95
NMD4YLR363C YPP1P46951 817 aa9.12□□□□□ -0.95
NMD4YLR363C MRT4P33201 236 aaKnown RBP9.11□□□□□ -0.95
NMD4YLR363C TIF1P10081 395 aaKnown RBP9.1□□□□□ -0.95
NMD4YLR363C AFT1P22149 690 aa9.1□□□□□ -0.95
NMD4YLR363C MRX12P47084 519 aa9.1□□□□□ -0.95
NMD4YLR363C HST3P53687 447 aa9.1□□□□□ -0.95
NMD4YLR363C ENO2P00925 437 aaKnown RBP9.09□□□□□ -0.95
NMD4YLR363C ASH1P34233 588 aa9.09□□□□□ -0.95
NMD4YLR363C ITT1Q04638 464 aa9.09□□□□□ -0.95
NMD4YLR363C EMW1P42842 904 aaKnown RBP9.08□□□□□ -0.96
NMD4YLR363C EMP47P43555 445 aa9.08□□□□□ -0.96
NMD4YLR363C RTT106P40161 455 aa9.07□□□□□ -0.96
NMD4YLR363C APP1P53933 587 aa9.07□□□□□ -0.96
NMD4YLR363C ISF1P32488 338 aa9.06□□□□□ -0.96
NMD4YLR363C RTG2P32608 588 aaKnown RBP9.06□□□□□ -0.96
NMD4YLR363C RIM21P48565 533 aa9.05□□□□□ -0.96
NMD4YLR363C MSB3P48566 633 aaPredicted RBP9.04□□□□□ -0.96
NMD4YLR363C GCR2Q01722 534 aa9.04□□□□□ -0.96
NMD4YLR363C UGA3P26370 528 aa9.03□□□□□ -0.96
NMD4YLR363C BRE2P43132 505 aa9.03□□□□□ -0.96
NMD4YLR363C YBL086CP38177 466 aa9.02□□□□□ -0.97
NMD4YLR363C ATG3P40344 310 aa9.02□□□□□ -0.97
NMD4YLR363C MKS1P34072 584 aa9□□□□□ -0.97
NMD4YLR363C APL6P46682 809 aa9□□□□□ -0.97
NMD4YLR363C ATG20Q07528 640 aa9□□□□□ -0.97
NMD4YLR363C MRX10Q05648 414 aa8.99□□□□□ -0.97
NMD4YLR363C YPR204WQ08995 1032 aa8.99□□□□□ -0.97
NMD4YLR363C ENO1P00924 437 aaKnown RBP8.98□□□□□ -0.97
NMD4YLR363C UTP13Q05946 817 aaKnown RBP8.98□□□□□ -0.97
NMD4YLR363C ENV9Q08651 330 aa8.98□□□□□ -0.97
NMD4YLR363C FBP26P32604 452 aa8.97□□□□□ -0.97
NMD4YLR363C YJR115WP47152 169 aa8.97□□□□□ -0.97
NMD4YLR363C RLF2Q12495 606 aa8.95□□□□□ -0.98
NMD4YLR363C ISU1Q03020 165 aa8.94□□□□□ -0.98
NMD4YLR363C DFG5Q05031 458 aa8.94□□□□□ -0.98
NMD4YLR363C ISR1Q06098 443 aaKnown RBP8.94□□□□□ -0.98
NMD4YLR363C SRF1Q12516 437 aa8.94□□□□□ -0.98
NMD4YLR363C RDS2P19541 446 aaKnown RBP8.93□□□□□ -0.98
NMD4YLR363C SOH1P38633 127 aa8.93□□□□□ -0.98
NMD4YLR363C PTK2P47116 818 aaKnown RBP8.93□□□□□ -0.98
NMD4YLR363C STE6P12866 1290 aa8.92□□□□□ -0.98
NMD4YLR363C SIS2P36024 562 aa8.92□□□□□ -0.98
NMD4YLR363C BDS1Q08347 646 aa8.92□□□□□ -0.98
NMD4YLR363C ARG82P07250 355 aa8.91□□□□□ -0.98
NMD4YLR363C RPP2BP02400 110 aaKnown RBP8.9□□□□□ -0.98
NMD4YLR363C HAL5P38970 855 aaKnown RBP8.89□□□□□ -0.99
NMD4YLR363C AAD14P42884 376 aa8.88□□□□□ -0.99
NMD4YLR363C PEP12P32854 288 aa8.87□□□□□ -0.99
NMD4YLR363C SPT2P06843 333 aaPredicted RBP8.86□□□□□ -0.99
NMD4YLR363C TTI1P36097 1038 aa8.86□□□□□ -0.99
NMD4YLR363C NUP85P46673 744 aa8.86□□□□□ -0.99
NMD4YLR363C UTR2P32623 467 aa8.84□□□□□ -0.99
NMD4YLR363C HDA3Q06623 655 aa8.84□□□□□ -0.99
NMD4YLR363C DAT1P13483 248 aaKnown RBP8.83□□□□□ -1
NMD4YLR363C MIP1P15801 1254 aa8.82□□□□□ -1
NMD4YLR363C TBS1P38114 1094 aa8.82□□□□□ -1
NMD4YLR363C DLD3P39976 496 aaKnown RBP8.82□□□□□ -1
NMD4YLR363C TAF7Q05021 590 aa8.82□□□□□ -1
NMD4YLR363C YLR346CQ06139 101 aa8.82□□□□□ -1
NMD4YLR363C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
NMD4YLR363C MET22P32179 357 aa8.81□□□□□ -1
NMD4YLR363C LSC2P53312 427 aa8.81□□□□□ -1
NMD4YLR363C WTM2Q12206 467 aa8.81□□□□□ -1
NMD4YLR363C KTR7P40504 517 aa8.8□□□□□ -1
NMD4YLR363C YFL034WP43564 1073 aa8.8□□□□□ -1
NMD4YLR363C CPS1P27614 576 aa8.79□□□□□ -1
NMD4YLR363C YDR444WQ04093 687 aa8.79□□□□□ -1
NMD4YLR363C DLD1P32891 587 aa8.78□□□□□ -1
NMD4YLR363C AIM9P40053 627 aaKnown RBP8.78□□□□□ -1
NMD4YLR363C TSC13Q99190 310 aa8.78□□□□□ -1
NMD4YLR363C SSA4P22202 642 aaKnown RBP8.77□□□□□ -1.01
NMD4YLR363C TGL4P36165 910 aa8.77□□□□□ -1.01
NMD4YLR363C LCB5Q06147 687 aaKnown RBP8.77□□□□□ -1.01
NMD4YLR363C OPT2Q06593 877 aa8.77□□□□□ -1.01
NMD4YLR363C SLX8P40072 274 aa8.76□□□□□ -1.01
NMD4YLR363C YJR098CP47139 656 aa8.76□□□□□ -1.01
NMD4YLR363C PHO87P25360 923 aa8.75□□□□□ -1.01
NMD4YLR363C GAL2P13181 574 aa8.74□□□□□ -1.01
NMD4YLR363C PDI1P17967 522 aaKnown RBP8.74□□□□□ -1.01
NMD4YLR363C UBP2Q01476 1272 aa8.74□□□□□ -1.01
NMD4YLR363C HAP4P14064 554 aa8.73□□□□□ -1.01
NMD4YLR363C GLY1P37303 387 aaKnown RBP8.73□□□□□ -1.01
NMD4YLR363C SWI5P08153 709 aa8.72□□□□□ -1.01
NMD4YLR363C GAR1P28007 205 aaKnown RBP8.72□□□□□ -1.01
NMD4YLR363C TCB3Q03640 1545 aaKnown RBP8.71□□□□□ -1.01
NMD4YLR363C NTH2P35172 780 aa8.71□□□□□ -1.02
NMD4YLR363C ACS2P52910 683 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms