RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W NUP188P52593 1655 aaKnown RBP9.55□□□□□ -0.88
SNF7YLR025W IPL1P38991 367 aa9.55□□□□□ -0.88
SNF7YLR025W ITT1Q04638 464 aa9.55□□□□□ -0.88
SNF7YLR025W PDR11P40550 1411 aa9.55□□□□□ -0.88
SNF7YLR025W VMR1P38735 1592 aa9.54□□□□□ -0.88
SNF7YLR025W TY3B-IQ7LHG5 1498 aaKnown RBP9.54□□□□□ -0.88
SNF7YLR025W RPP1BP10622 106 aaKnown RBP9.54□□□□□ -0.88
SNF7YLR025W SPE2P21182 396 aa9.54□□□□□ -0.88
SNF7YLR025W PML39Q03760 334 aa9.54□□□□□ -0.88
SNF7YLR025W PSE1P32337 1089 aaKnown RBP9.52□□□□□ -0.89
SNF7YLR025W AIM7Q12156 149 aa9.52□□□□□ -0.89
SNF7YLR025W YLR419WQ06698 1435 aaKnown RBP9.51□□□□□ -0.89
SNF7YLR025W PRS1P32895 427 aaKnown RBP9.51□□□□□ -0.89
SNF7YLR025W TYS1P36421 394 aaKnown RBP9.51□□□□□ -0.89
SNF7YLR025W ORC6P38826 435 aa9.51□□□□□ -0.89
SNF7YLR025W FKH1P40466 484 aa9.51□□□□□ -0.89
SNF7YLR025W GLC3P32775 704 aa9.5□□□□□ -0.89
SNF7YLR025W TAF8Q03750 510 aa9.5□□□□□ -0.89
SNF7YLR025W DNF2Q12675 1612 aa9.49□□□□□ -0.89
SNF7YLR025W ATF2P53296 535 aa9.49□□□□□ -0.89
SNF7YLR025W YDL129WQ07555 291 aa9.49□□□□□ -0.89
SNF7YLR025W YAP3P38749 330 aa9.48□□□□□ -0.89
SNF7YLR025W CHZ1P40019 153 aaPredicted RBP9.48□□□□□ -0.89
SNF7YLR025W MID1P41821 548 aa9.48□□□□□ -0.89
SNF7YLR025W SIS1P25294 352 aaKnown RBP9.47□□□□□ -0.89
SNF7YLR025W ALD4P46367 519 aaKnown RBP9.47□□□□□ -0.89
SNF7YLR025W CSC1Q06538 782 aa9.47□□□□□ -0.89
SNF7YLR025W MRX12P47084 519 aa9.46□□□□□ -0.9
SNF7YLR025W CDC73Q06697 393 aa9.46□□□□□ -0.9
SNF7YLR025W KIN1P13185 1064 aa9.45□□□□□ -0.9
SNF7YLR025W GAP1P19145 602 aaPredicted RBP9.45□□□□□ -0.9
SNF7YLR025W DPL1Q05567 589 aa9.45□□□□□ -0.9
SNF7YLR025W RGR1P19263 1082 aa9.44□□□□□ -0.9
SNF7YLR025W MPC54Q08550 464 aa9.44□□□□□ -0.9
SNF7YLR025W AIR2Q12476 344 aaKnown RBP9.44□□□□□ -0.9
SNF7YLR025W RAD9P14737 1309 aa9.43□□□□□ -0.9
SNF7YLR025W MVP1P40959 511 aaKnown RBP9.43□□□□□ -0.9
SNF7YLR025W CAB1Q04430 367 aa9.43□□□□□ -0.9
SNF7YLR025W PEX29Q03370 554 aa9.42□□□□□ -0.9
SNF7YLR025W TFB4Q12004 338 aa9.42□□□□□ -0.9
SNF7YLR025W SAP30P38429 201 aa9.39□□□□□ -0.91
SNF7YLR025W PEX21P50091 288 aa9.39□□□□□ -0.91
SNF7YLR025W NUP192P47054 1683 aa9.39□□□□□ -0.91
SNF7YLR025W CLB5P30283 435 aa9.38□□□□□ -0.91
SNF7YLR025W TEA1P47988 759 aa9.38□□□□□ -0.91
SNF7YLR025W CDC45Q08032 650 aa9.38□□□□□ -0.91
SNF7YLR025W ISU2Q12056 156 aa9.38□□□□□ -0.91
SNF7YLR025W RPP0P05317 312 aaKnown RBP9.37□□□□□ -0.91
SNF7YLR025W FPR3P38911 411 aaKnown RBP9.37□□□□□ -0.91
SNF7YLR025W NMA111P53920 997 aa9.37□□□□□ -0.91
SNF7YLR025W VPS27P40343 622 aaKnown RBP9.36□□□□□ -0.91
SNF7YLR025W MLP1Q02455 1875 aaKnown RBP9.36□□□□□ -0.91
SNF7YLR025W BCK1Q01389 1478 aa9.35□□□□□ -0.91
SNF7YLR025W YJL171CP46992 396 aa9.35□□□□□ -0.91
SNF7YLR025W YPR109WQ06104 294 aa9.35□□□□□ -0.91
SNF7YLR025W BNI1P41832 1953 aa9.35□□□□□ -0.91
SNF7YLR025W RIA1P53893 1110 aa9.34□□□□□ -0.91
SNF7YLR025W YDL144CQ07589 356 aa9.33□□□□□ -0.92
SNF7YLR025W ARH1P48360 493 aa9.32□□□□□ -0.92
SNF7YLR025W TUM1Q08686 304 aaKnown RBP9.32□□□□□ -0.92
SNF7YLR025W BMT6Q12291 365 aa9.32□□□□□ -0.92
SNF7YLR025W CFT1Q06632 1357 aaKnown RBP9.32□□□□□ -0.92
SNF7YLR025W KAR2P16474 682 aaKnown RBP9.31□□□□□ -0.92
SNF7YLR025W HAP5Q02516 242 aa9.31□□□□□ -0.92
SNF7YLR025W KRE5P22023 1365 aa9.3□□□□□ -0.92
SNF7YLR025W FUN12P39730 1002 aaKnown RBP9.3□□□□□ -0.92
SNF7YLR025W RCM1P53972 490 aa9.29□□□□□ -0.92
SNF7YLR025W YRR1Q12172 810 aa9.29□□□□□ -0.92
SNF7YLR025W RTF1P53064 558 aa9.28□□□□□ -0.92
SNF7YLR025W PAP2P53632 584 aaKnown RBP9.28□□□□□ -0.92
SNF7YLR025W RVB2Q12464 471 aaKnown RBP9.28□□□□□ -0.92
SNF7YLR025W TRK1P12685 1235 aa9.27□□□□□ -0.93
SNF7YLR025W RTR1P40084 226 aaPredicted RBP9.27□□□□□ -0.93
SNF7YLR025W ELP4Q02884 456 aaKnown RBP9.27□□□□□ -0.93
SNF7YLR025W YRB30P53107 440 aaPredicted RBP9.26□□□□□ -0.93
SNF7YLR025W IOC4Q04213 475 aa9.26□□□□□ -0.93
SNF7YLR025W LEU2P04173 364 aaPredicted RBP9.25□□□□□ -0.93
SNF7YLR025W PDI1P17967 522 aaKnown RBP9.25□□□□□ -0.93
SNF7YLR025W GUA1P38625 525 aaKnown RBP9.25□□□□□ -0.93
SNF7YLR025W MAK10Q02197 733 aa9.25□□□□□ -0.93
SNF7YLR025W MPP10P47083 593 aaKnown RBP9.23□□□□□ -0.93
SNF7YLR025W CSN12P47130 423 aa9.23□□□□□ -0.93
SNF7YLR025W BNI4P53858 892 aa9.23□□□□□ -0.93
SNF7YLR025W DMA2P53924 522 aa9.23□□□□□ -0.93
SNF7YLR025W NIS1P53939 407 aa9.23□□□□□ -0.93
SNF7YLR025W HAP1P0CE41 1502 aa9.22□□□□□ -0.93
SNF7YLR025W YEF3P16521 1044 aaKnown RBP9.22□□□□□ -0.93
SNF7YLR025W SPT23P35210 1082 aa9.22□□□□□ -0.93
SNF7YLR025W YDR344CQ05510 147 aa9.22□□□□□ -0.93
SNF7YLR025W PSK1P31374 1356 aa9.22□□□□□ -0.93
SNF7YLR025W PRE3P38624 215 aa9.21□□□□□ -0.94
SNF7YLR025W MTR4P47047 1073 aaKnown RBP9.21□□□□□ -0.94
SNF7YLR025W YML133CQ03099 1374 aa9.21□□□□□ -0.94
SNF7YLR025W YLL067CQ07888 1374 aa9.21□□□□□ -0.94
SNF7YLR025W YLL066CQ99208 1374 aa9.21□□□□□ -0.94
SNF7YLR025W SSA2P10592 639 aaKnown RBP9.2□□□□□ -0.94
SNF7YLR025W SIT4P20604 311 aa9.2□□□□□ -0.94
SNF7YLR025W PPH3P32345 308 aa9.2□□□□□ -0.94
SNF7YLR025W HGH1P48362 394 aaKnown RBP9.2□□□□□ -0.94
SNF7YLR025W FPK1P53739 893 aa9.2□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms