RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W TY1A-MR2P0CX69 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-JR2P47099 440 aa6.14□□□□□ -1.43
CTK1YKL139W RPA14P50106 137 aa6.14□□□□□ -1.43
CTK1YKL139W HAP5Q02516 242 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-DR1Q03856 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-ML1Q04706 440 aaKnown RBP6.14□□□□□ -1.43
CTK1YKL139W TY1A-BRQ12217 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-NL2Q12470 440 aa6.14□□□□□ -1.43
CTK1YKL139W TY1A-GR2Q12485 440 aa6.14□□□□□ -1.43
CTK1YKL139W SEC2P17065 759 aa6.14□□□□□ -1.43
CTK1YKL139W TEC1P18412 486 aa6.14□□□□□ -1.43
CTK1YKL139W YBL113CQ7M4S9 792 aa6.14□□□□□ -1.43
CTK1YKL139W RRN6P32786 894 aa6.13□□□□□ -1.43
CTK1YKL139W FIG4P42837 879 aa6.13□□□□□ -1.43
CTK1YKL139W STE20Q03497 939 aaKnown RBP6.13□□□□□ -1.43
CTK1YKL139W YPR097WQ06839 1073 aa6.13□□□□□ -1.43
CTK1YKL139W FRA1Q07825 749 aa6.13□□□□□ -1.43
CTK1YKL139W GUT2P32191 649 aa6.12□□□□□ -1.43
CTK1YKL139W SPT23P35210 1082 aa6.12□□□□□ -1.43
CTK1YKL139W TPS3P38426 1054 aaKnown RBP6.12□□□□□ -1.43
CTK1YKL139W IPL1P38991 367 aa6.12□□□□□ -1.43
CTK1YKL139W STM1P39015 273 aaKnown RBP6.12□□□□□ -1.43
CTK1YKL139W ALR1Q08269 859 aa6.12□□□□□ -1.43
CTK1YKL139W YEL077CQ3E7X8 1277 aa6.12□□□□□ -1.43
CTK1YKL139W ERP5P38819 212 aa6.11□□□□□ -1.43
CTK1YKL139W YPR084WQ06821 456 aa6.11□□□□□ -1.43
CTK1YKL139W BUD20Q08004 166 aaPredicted RBP6.11□□□□□ -1.43
CTK1YKL139W PAC1P39946 494 aaKnown RBP6.1□□□□□ -1.43
CTK1YKL139W ATG3P40344 310 aa6.1□□□□□ -1.43
CTK1YKL139W KAR5Q04746 504 aa6.1□□□□□ -1.43
CTK1YKL139W PDC1P06169 563 aaKnown RBP6.1□□□□□ -1.43
CTK1YKL139W PHO87P25360 923 aa6.1□□□□□ -1.43
CTK1YKL139W SOH1P38633 127 aa6.1□□□□□ -1.43
CTK1YKL139W ORC1P54784 914 aaPredicted RBP6.1□□□□□ -1.43
CTK1YKL139W CWC15Q03772 175 aaKnown RBP6.1□□□□□ -1.43
CTK1YKL139W AIM44Q99299 758 aa6.1□□□□□ -1.43
CTK1YKL139W PAM1P37304 830 aaKnown RBP6.08□□□□□ -1.44
CTK1YKL139W APL6P46682 809 aa6.08□□□□□ -1.44
CTK1YKL139W ACS2P52910 683 aaKnown RBP6.08□□□□□ -1.44
CTK1YKL139W HAP4P14064 554 aa6.07□□□□□ -1.44
CTK1YKL139W SEC20P28791 383 aa6.07□□□□□ -1.44
CTK1YKL139W ROM1P53046 1155 aa6.07□□□□□ -1.44
CTK1YKL139W PUF6Q04373 656 aaKnown RBP6.07□□□□□ -1.44
CTK1YKL139W UTP13Q05946 817 aaKnown RBP6.07□□□□□ -1.44
CTK1YKL139W MET10P39692 1035 aa6.06□□□□□ -1.44
CTK1YKL139W RRN7P40992 514 aa6.06□□□□□ -1.44
CTK1YKL139W KXD1P53158 218 aa6.06□□□□□ -1.44
CTK1YKL139W BNI4P53858 892 aa6.06□□□□□ -1.44
CTK1YKL139W TRL1P09880 827 aaKnown RBP6.06□□□□□ -1.44
CTK1YKL139W GRS1P38088 690 aaKnown RBP6.06□□□□□ -1.44
CTK1YKL139W MSC6Q08818 692 aaKnown RBP6.06□□□□□ -1.44
CTK1YKL139W PRT1P06103 763 aaKnown RBP6.05□□□□□ -1.44
CTK1YKL139W ASF1P32447 279 aa6.05□□□□□ -1.44
CTK1YKL139W PNP1Q05788 311 aa6.05□□□□□ -1.44
CTK1YKL139W PDI1P17967 522 aaKnown RBP6.04□□□□□ -1.44
CTK1YKL139W YHL050CP38721 697 aa6.04□□□□□ -1.44
CTK1YKL139W YHR219WP38900 624 aa6.04□□□□□ -1.44
CTK1YKL139W MDJ2P42834 146 aa6.04□□□□□ -1.44
CTK1YKL139W HXT10P43581 546 aa6.04□□□□□ -1.44
CTK1YKL139W GAS4Q08271 471 aa6.04□□□□□ -1.44
CTK1YKL139W YPR015CQ12531 247 aa6.04□□□□□ -1.44
CTK1YKL139W TSC13Q99190 310 aa6.04□□□□□ -1.44
CTK1YKL139W VAC17P25591 423 aa6.03□□□□□ -1.44
CTK1YKL139W PAT1P25644 796 aaKnown RBP6.03□□□□□ -1.44
CTK1YKL139W BOL3P39724 118 aa6.03□□□□□ -1.44
CTK1YKL139W ITT1Q04638 464 aa6.03□□□□□ -1.44
CTK1YKL139W PUN1Q06991 263 aa6.03□□□□□ -1.44
CTK1YKL139W PTC2P39966 464 aaKnown RBP6.02□□□□□ -1.45
CTK1YKL139W SRS2P12954 1174 aa6.01□□□□□ -1.45
CTK1YKL139W IXR1P33417 597 aa6.01□□□□□ -1.45
CTK1YKL139W HAL5P38970 855 aaKnown RBP6.01□□□□□ -1.45
CTK1YKL139W ALD2P47771 506 aa6.01□□□□□ -1.45
CTK1YKL139W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
CTK1YKL139W ATG1P53104 897 aa6.01□□□□□ -1.45
CTK1YKL139W ISR1Q06098 443 aaKnown RBP6.01□□□□□ -1.45
CTK1YKL139W FUR4P05316 633 aaKnown RBP6□□□□□ -1.45
CTK1YKL139W MIP1P15801 1254 aa6□□□□□ -1.45
CTK1YKL139W VAN1P23642 535 aa6□□□□□ -1.45
CTK1YKL139W RRD1P40454 393 aaKnown RBP6□□□□□ -1.45
CTK1YKL139W POL32P47110 350 aa6□□□□□ -1.45
CTK1YKL139W TPD3P31383 635 aa5.99□□□□□ -1.45
CTK1YKL139W SPT16P32558 1035 aaKnown RBP5.99□□□□□ -1.45
CTK1YKL139W PPX1P38698 397 aa5.99□□□□□ -1.45
CTK1YKL139W RRP15Q06511 250 aaPredicted RBP5.99□□□□□ -1.45
CTK1YKL139W WHI5Q12416 295 aa5.99□□□□□ -1.45
CTK1YKL139W ATE1P16639 503 aa5.98□□□□□ -1.45
CTK1YKL139W GLO3P38682 493 aaKnown RBP5.98□□□□□ -1.45
CTK1YKL139W AIM9P40053 627 aaKnown RBP5.98□□□□□ -1.45
CTK1YKL139W THI12P42883 340 aa5.98□□□□□ -1.45
CTK1YKL139W THI5P43534 340 aa5.98□□□□□ -1.45
CTK1YKL139W THI11P47183 340 aa5.98□□□□□ -1.45
CTK1YKL139W YML082WQ04533 649 aaKnown RBP5.98□□□□□ -1.45
CTK1YKL139W THI13Q07748 340 aa5.98□□□□□ -1.45
CTK1YKL139W QDR1P40475 563 aa5.97□□□□□ -1.45
CTK1YKL139W YFL034WP43564 1073 aa5.97□□□□□ -1.45
CTK1YKL139W HDA3Q06623 655 aa5.97□□□□□ -1.45
CTK1YKL139W MOD5P07884 428 aa5.97□□□□□ -1.45
CTK1YKL139W ALD4P46367 519 aaKnown RBP5.97□□□□□ -1.45
CTK1YKL139W TRS33Q99394 268 aa5.97□□□□□ -1.45
CTK1YKL139W RAS1P01119 309 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 136.5 ms