RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C TPD3P31383 635 aa6.99□□□□□ -1.29
VPS25YJR102C YPP1P46951 817 aa6.99□□□□□ -1.29
VPS25YJR102C ENO1P00924 437 aaKnown RBP6.98□□□□□ -1.29
VPS25YJR102C GUT2P32191 649 aa6.98□□□□□ -1.29
VPS25YJR102C EMP47P43555 445 aa6.98□□□□□ -1.29
VPS25YJR102C RIM21P48565 533 aa6.97□□□□□ -1.29
VPS25YJR102C STE20Q03497 939 aaKnown RBP6.97□□□□□ -1.29
VPS25YJR102C AMS1P22855 1083 aa6.96□□□□□ -1.3
VPS25YJR102C VAC17P25591 423 aa6.96□□□□□ -1.3
VPS25YJR102C IXR1P33417 597 aa6.96□□□□□ -1.3
VPS25YJR102C CPS1P27614 576 aa6.95□□□□□ -1.3
VPS25YJR102C ITT1Q04638 464 aa6.95□□□□□ -1.3
VPS25YJR102C ENV9Q08651 330 aa6.95□□□□□ -1.3
VPS25YJR102C SYH1Q02875 849 aaKnown RBP6.94□□□□□ -1.3
VPS25YJR102C FRA1Q07825 749 aa6.93□□□□□ -1.3
VPS25YJR102C SSA4P22202 642 aaKnown RBP6.92□□□□□ -1.3
VPS25YJR102C MRX10Q05648 414 aa6.92□□□□□ -1.3
VPS25YJR102C YPR084WQ06821 456 aa6.92□□□□□ -1.3
VPS25YJR102C RAS1P01119 309 aa6.91□□□□□ -1.3
VPS25YJR102C TTI1P36097 1038 aa6.91□□□□□ -1.3
VPS25YJR102C DPS1P04802 557 aaKnown RBP6.9□□□□□ -1.3
VPS25YJR102C KTR7P40504 517 aa6.9□□□□□ -1.3
VPS25YJR102C MRX12P47084 519 aa6.9□□□□□ -1.3
VPS25YJR102C SIS2P36024 562 aa6.89□□□□□ -1.31
VPS25YJR102C ATG3P40344 310 aa6.89□□□□□ -1.31
VPS25YJR102C APP1P53933 587 aa6.89□□□□□ -1.31
VPS25YJR102C RDS2P19541 446 aaKnown RBP6.87□□□□□ -1.31
VPS25YJR102C SOH1P38633 127 aa6.87□□□□□ -1.31
VPS25YJR102C CLA4P48562 842 aa6.86□□□□□ -1.31
VPS25YJR102C HED1Q03937 162 aa6.86□□□□□ -1.31
VPS25YJR102C SUB2Q07478 446 aaKnown RBP6.86□□□□□ -1.31
VPS25YJR102C ISR1Q06098 443 aaKnown RBP6.84□□□□□ -1.31
VPS25YJR102C ATG20Q07528 640 aa6.84□□□□□ -1.31
VPS25YJR102C TGL4P36165 910 aa6.83□□□□□ -1.32
VPS25YJR102C PEP12P32854 288 aa6.82□□□□□ -1.32
VPS25YJR102C AIR1P40507 360 aaKnown RBP6.82□□□□□ -1.32
VPS25YJR102C EMW1P42842 904 aaKnown RBP6.81□□□□□ -1.32
VPS25YJR102C APL6P46682 809 aa6.81□□□□□ -1.32
VPS25YJR102C ECM23Q02710 187 aa6.81□□□□□ -1.32
VPS25YJR102C UTP13Q05946 817 aaKnown RBP6.81□□□□□ -1.32
VPS25YJR102C SSA1P10591 642 aaKnown RBP6.8□□□□□ -1.32
VPS25YJR102C MKS1P34072 584 aa6.8□□□□□ -1.32
VPS25YJR102C MIP1P15801 1254 aa6.79□□□□□ -1.32
VPS25YJR102C PUP1P25043 261 aa6.79□□□□□ -1.32
VPS25YJR102C NOB1Q08444 459 aaKnown RBP6.79□□□□□ -1.32
VPS25YJR102C MET32Q12041 191 aa6.79□□□□□ -1.32
VPS25YJR102C CDC4P07834 779 aa6.78□□□□□ -1.32
VPS25YJR102C MRT4P33201 236 aaKnown RBP6.78□□□□□ -1.32
VPS25YJR102C HAL5P38970 855 aaKnown RBP6.78□□□□□ -1.32
VPS25YJR102C HST3P53687 447 aa6.78□□□□□ -1.32
VPS25YJR102C YML083CQ04526 418 aa6.78□□□□□ -1.32
VPS25YJR102C RPL34AP87262 121 aaPredicted RBP6.77□□□□□ -1.33
VPS25YJR102C RGA2Q06407 1009 aa6.77□□□□□ -1.33
VPS25YJR102C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
VPS25YJR102C GAL2P13181 574 aa6.76□□□□□ -1.33
VPS25YJR102C FBP26P32604 452 aa6.76□□□□□ -1.33
VPS25YJR102C DFG5Q05031 458 aa6.76□□□□□ -1.33
VPS25YJR102C PDI1P17967 522 aaKnown RBP6.75□□□□□ -1.33
VPS25YJR102C PHO87P25360 923 aa6.75□□□□□ -1.33
VPS25YJR102C UGA3P26370 528 aa6.75□□□□□ -1.33
VPS25YJR102C YBL086CP38177 466 aa6.75□□□□□ -1.33
VPS25YJR102C UBX7P38349 436 aa6.75□□□□□ -1.33
VPS25YJR102C ISU1Q03020 165 aa6.75□□□□□ -1.33
VPS25YJR102C DAT1P13483 248 aaKnown RBP6.74□□□□□ -1.33
VPS25YJR102C UTR2P32623 467 aa6.74□□□□□ -1.33
VPS25YJR102C ASH1P34233 588 aa6.74□□□□□ -1.33
VPS25YJR102C GEF1P37020 779 aa6.74□□□□□ -1.33
VPS25YJR102C AIM9P40053 627 aaKnown RBP6.74□□□□□ -1.33
VPS25YJR102C HDA3Q06623 655 aa6.74□□□□□ -1.33
VPS25YJR102C BDS1Q08347 646 aa6.74□□□□□ -1.33
VPS25YJR102C HAP4P14064 554 aa6.73□□□□□ -1.33
VPS25YJR102C YFL034WP43564 1073 aa6.73□□□□□ -1.33
VPS25YJR102C ACS2P52910 683 aaKnown RBP6.72□□□□□ -1.33
VPS25YJR102C TSC13Q99190 310 aa6.72□□□□□ -1.33
VPS25YJR102C RPP2BP02400 110 aaKnown RBP6.71□□□□□ -1.34
VPS25YJR102C AFT1P22149 690 aa6.71□□□□□ -1.34
VPS25YJR102C TBS1P38114 1094 aa6.71□□□□□ -1.34
VPS25YJR102C TRK1P12685 1235 aa6.69□□□□□ -1.34
VPS25YJR102C STE6P12866 1290 aa6.69□□□□□ -1.34
VPS25YJR102C NTH2P35172 780 aa6.69□□□□□ -1.34
VPS25YJR102C DLD3P39976 496 aaKnown RBP6.69□□□□□ -1.34
VPS25YJR102C MSB3P48566 633 aaPredicted RBP6.69□□□□□ -1.34
VPS25YJR102C SRF1Q12516 437 aa6.69□□□□□ -1.34
VPS25YJR102C SPT2P06843 333 aaPredicted RBP6.68□□□□□ -1.34
VPS25YJR102C RTT106P40161 455 aa6.68□□□□□ -1.34
VPS25YJR102C SRC1Q03707 834 aa6.68□□□□□ -1.34
VPS25YJR102C GAS4Q08271 471 aa6.68□□□□□ -1.34
VPS25YJR102C WTM2Q12206 467 aa6.68□□□□□ -1.34
VPS25YJR102C RPS6AP0CX37 236 aaKnown RBP6.67□□□□□ -1.34
VPS25YJR102C RPS6BP0CX38 236 aaPredicted RBP6.67□□□□□ -1.34
VPS25YJR102C ROM1P53046 1155 aa6.67□□□□□ -1.34
VPS25YJR102C ARG82P07250 355 aa6.65□□□□□ -1.34
VPS25YJR102C SWI5P08153 709 aa6.65□□□□□ -1.34
VPS25YJR102C UTP7P40055 554 aaKnown RBP6.65□□□□□ -1.34
VPS25YJR102C SLX8P40072 274 aa6.65□□□□□ -1.34
VPS25YJR102C YJR115WP47152 169 aa6.65□□□□□ -1.34
VPS25YJR102C CYT1P07143 309 aa6.64□□□□□ -1.35
VPS25YJR102C VAN1P23642 535 aa6.64□□□□□ -1.35
VPS25YJR102C RGA1P39083 1007 aa6.64□□□□□ -1.35
VPS25YJR102C PTK2P47116 818 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms