RNA–Protein interactions for RNA: YJR024C

MDE1, Transcript of 5'-methylthioribulose-1-phosphate dehydratase, yeastyeast

Gene MDE1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDE1YJR024C YDL144CQ07589 356 aa8.18□□□□□ -1.1
MDE1YJR024C PRP45P28004 379 aaPredicted RBP8.17□□□□□ -1.1
MDE1YJR024C STS1P38637 319 aa8.17□□□□□ -1.1
MDE1YJR024C RTR1P40084 226 aaPredicted RBP8.17□□□□□ -1.1
MDE1YJR024C RPO41P13433 1351 aaKnown RBP8.17□□□□□ -1.1
MDE1YJR024C PRP5P21372 849 aaPredicted RBP8.16□□□□□ -1.1
MDE1YJR024C VPS27P40343 622 aaKnown RBP8.16□□□□□ -1.1
MDE1YJR024C YRF1-3P0CX14 1859 aa8.15□□□□□ -1.1
MDE1YJR024C YRF1-7P0CX15 1859 aa8.15□□□□□ -1.1
MDE1YJR024C YRF1-6P53819 1859 aa8.15□□□□□ -1.1
MDE1YJR024C DBP1P24784 617 aaKnown RBP8.15□□□□□ -1.1
MDE1YJR024C MPP10P47083 593 aaKnown RBP8.15□□□□□ -1.1
MDE1YJR024C RRP46P53256 223 aaPredicted RBP8.15□□□□□ -1.1
MDE1YJR024C CDC45Q08032 650 aa8.15□□□□□ -1.1
MDE1YJR024C YOR238WQ08634 303 aa8.15□□□□□ -1.1
MDE1YJR024C SET1P38827 1080 aaKnown RBP8.14□□□□□ -1.11
MDE1YJR024C YAP5P40574 245 aa8.13□□□□□ -1.11
MDE1YJR024C PIB1Q06651 286 aa8.13□□□□□ -1.11
MDE1YJR024C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
MDE1YJR024C MSB3P48566 633 aaPredicted RBP8.12□□□□□ -1.11
MDE1YJR024C SLM3Q12093 417 aa8.11□□□□□ -1.11
MDE1YJR024C PRD1P25375 712 aa8.1□□□□□ -1.11
MDE1YJR024C RVB2Q12464 471 aaKnown RBP8.1□□□□□ -1.11
MDE1YJR024C SUI2P20459 304 aaKnown RBP8.09□□□□□ -1.11
MDE1YJR024C TCB1Q12466 1186 aa8.09□□□□□ -1.11
MDE1YJR024C COQ8P27697 501 aa8.08□□□□□ -1.12
MDE1YJR024C AKL1P38080 1108 aaKnown RBP8.08□□□□□ -1.12
MDE1YJR024C SAP155P43612 1002 aa8.08□□□□□ -1.12
MDE1YJR024C ENT1Q12518 454 aa8.08□□□□□ -1.12
MDE1YJR024C TPD3P31383 635 aa8.07□□□□□ -1.12
MDE1YJR024C NOP2P40991 618 aaKnown RBP8.07□□□□□ -1.12
MDE1YJR024C DSD1P53095 428 aa8.07□□□□□ -1.12
MDE1YJR024C THI22Q06490 572 aa8.07□□□□□ -1.12
MDE1YJR024C RIM15P43565 1770 aa8.07□□□□□ -1.12
MDE1YJR024C FUN12P39730 1002 aaKnown RBP8.06□□□□□ -1.12
MDE1YJR024C XKS1P42826 600 aa8.06□□□□□ -1.12
MDE1YJR024C YRB30P53107 440 aaPredicted RBP8.06□□□□□ -1.12
MDE1YJR024C YRF1-4O13559 1382 aa8.06□□□□□ -1.12
MDE1YJR024C RSF2P46974 1380 aa8.06□□□□□ -1.12
MDE1YJR024C APP1P53933 587 aa8.05□□□□□ -1.12
MDE1YJR024C MST1P07236 462 aa8.04□□□□□ -1.12
MDE1YJR024C HSP104P31539 908 aaKnown RBP8.04□□□□□ -1.12
MDE1YJR024C EDS1P38073 919 aa8.04□□□□□ -1.12
MDE1YJR024C RTT109Q07794 436 aa8.04□□□□□ -1.12
MDE1YJR024C SIR4P11978 1358 aa8.03□□□□□ -1.12
MDE1YJR024C HEF3P53978 1044 aaKnown RBP8.03□□□□□ -1.12
MDE1YJR024C ENV9Q08651 330 aa8.03□□□□□ -1.12
MDE1YJR024C NTH2P35172 780 aa8.02□□□□□ -1.13
MDE1YJR024C YNL050CP53952 270 aa8.01□□□□□ -1.13
MDE1YJR024C CTF4Q01454 927 aa8.01□□□□□ -1.13
MDE1YJR024C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
MDE1YJR024C AOS1Q06624 347 aa8.01□□□□□ -1.13
MDE1YJR024C IES2P40154 320 aa8□□□□□ -1.13
MDE1YJR024C IMH1Q06704 911 aaKnown RBP8□□□□□ -1.13
MDE1YJR024C ZDS1P50111 915 aaKnown RBP7.99□□□□□ -1.13
MDE1YJR024C YPR148CQ06523 435 aa7.99□□□□□ -1.13
MDE1YJR024C RAD2P07276 1031 aa7.98□□□□□ -1.13
MDE1YJR024C VMA1P17255 1071 aaKnown RBP7.98□□□□□ -1.13
MDE1YJR024C MAM1P40065 302 aa7.98□□□□□ -1.13
MDE1YJR024C VPS70P47161 811 aa7.98□□□□□ -1.13
MDE1YJR024C FPR3P38911 411 aaKnown RBP7.97□□□□□ -1.13
MDE1YJR024C RRT14P40470 206 aa7.97□□□□□ -1.13
MDE1YJR024C GYP7P48365 746 aa7.97□□□□□ -1.13
MDE1YJR024C MEC3Q02574 474 aa7.97□□□□□ -1.13
MDE1YJR024C MAK21Q12176 1025 aaKnown RBP7.97□□□□□ -1.13
MDE1YJR024C DAL5P15365 543 aa7.96□□□□□ -1.14
MDE1YJR024C KCC4P25389 1037 aa7.96□□□□□ -1.14
MDE1YJR024C PTC3P34221 468 aaKnown RBP7.96□□□□□ -1.14
MDE1YJR024C YKL133CP36066 463 aa7.96□□□□□ -1.14
MDE1YJR024C INP54Q08227 384 aaKnown RBP7.96□□□□□ -1.14
MDE1YJR024C NUP145P49687 1317 aa7.96□□□□□ -1.14
MDE1YJR024C ROM2P51862 1356 aaKnown RBP7.96□□□□□ -1.14
MDE1YJR024C UGA3P26370 528 aa7.95□□□□□ -1.14
MDE1YJR024C YBR287WP38355 427 aa7.95□□□□□ -1.14
MDE1YJR024C YIL092WP40497 633 aa7.95□□□□□ -1.14
MDE1YJR024C BUD27P43573 796 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
MDE1YJR024C NSE3Q05541 303 aa7.95□□□□□ -1.14
MDE1YJR024C NOP53Q12080 455 aaKnown RBP7.95□□□□□ -1.14
MDE1YJR024C EDE1P34216 1381 aa7.95□□□□□ -1.14
MDE1YJR024C ADE16P54113 591 aaKnown RBP7.94□□□□□ -1.14
MDE1YJR024C BMS1Q08965 1183 aaKnown RBP7.94□□□□□ -1.14
MDE1YJR024C FRK1Q03002 865 aaPredicted RBP7.93□□□□□ -1.14
MDE1YJR024C SRT1Q03175 343 aa7.93□□□□□ -1.14
MDE1YJR024C COQ4O13525 335 aa7.92□□□□□ -1.14
MDE1YJR024C ATG13Q06628 738 aa7.92□□□□□ -1.14
MDE1YJR024C OSM1P21375 501 aaKnown RBP7.91□□□□□ -1.14
MDE1YJR024C GTT3P39996 337 aa7.91□□□□□ -1.14
MDE1YJR024C YFR016CP43597 1233 aaKnown RBP7.91□□□□□ -1.14
MDE1YJR024C LYS2P07702 1392 aa7.91□□□□□ -1.14
MDE1YJR024C ALE1Q08548 619 aa7.9□□□□□ -1.14
MDE1YJR024C SAM3Q08986 587 aa7.9□□□□□ -1.14
MDE1YJR024C UTP10P42945 1769 aaKnown RBP7.89□□□□□ -1.15
MDE1YJR024C DOT5P40553 215 aa7.89□□□□□ -1.15
MDE1YJR024C YBP2P53169 641 aa7.89□□□□□ -1.15
MDE1YJR024C COBP00163 385 aa7.88□□□□□ -1.15
MDE1YJR024C RAD4P14736 754 aa7.88□□□□□ -1.15
MDE1YJR024C BUD31P25337 157 aaPredicted RBP7.88□□□□□ -1.15
MDE1YJR024C POL32P47110 350 aa7.88□□□□□ -1.15
MDE1YJR024C FOX2Q02207 900 aaKnown RBP7.88□□□□□ -1.15
MDE1YJR024C YPP1P46951 817 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms