RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeastyeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB6YJL100W EBP2P36049 427 aaKnown RBP10.95□□□□□ -0.66
LSB6YJL100W DSD1P53095 428 aa10.95□□□□□ -0.66
LSB6YJL100W YRF1-4O13559 1382 aa10.94□□□□□ -0.66
LSB6YJL100W VPS24P36095 224 aaKnown RBP10.94□□□□□ -0.66
LSB6YJL100W AKL1P38080 1108 aaKnown RBP10.93□□□□□ -0.66
LSB6YJL100W RRT14P40470 206 aa10.93□□□□□ -0.66
LSB6YJL100W IMH1Q06704 911 aaKnown RBP10.93□□□□□ -0.66
LSB6YJL100W APC1P53886 1748 aa10.92□□□□□ -0.66
LSB6YJL100W MSP1P28737 362 aa10.91□□□□□ -0.66
LSB6YJL100W YBR287WP38355 427 aa10.91□□□□□ -0.66
LSB6YJL100W YIL177CP40434 1758 aa10.91□□□□□ -0.66
LSB6YJL100W YJL225CP40889 1758 aa10.91□□□□□ -0.66
LSB6YJL100W YIL055CP40523 627 aaKnown RBP10.9□□□□□ -0.66
LSB6YJL100W XKS1P42826 600 aa10.9□□□□□ -0.66
LSB6YJL100W GYP7P48365 746 aa10.9□□□□□ -0.66
LSB6YJL100W SRT1Q03175 343 aa10.89□□□□□ -0.67
LSB6YJL100W IES2P40154 320 aa10.88□□□□□ -0.67
LSB6YJL100W NKP2Q06162 153 aa10.88□□□□□ -0.67
LSB6YJL100W RSF2P46974 1380 aa10.88□□□□□ -0.67
LSB6YJL100W CSI1Q04368 295 aa10.87□□□□□ -0.67
LSB6YJL100W YRF1-2P40105 1681 aa10.87□□□□□ -0.67
LSB6YJL100W SPO1P53541 631 aa10.86□□□□□ -0.67
LSB6YJL100W YNL050CP53952 270 aa10.86□□□□□ -0.67
LSB6YJL100W YNG2P38806 282 aaKnown RBP10.86□□□□□ -0.67
LSB6YJL100W ZDS1P50111 915 aaKnown RBP10.86□□□□□ -0.67
LSB6YJL100W LSP1Q12230 341 aaKnown RBP10.86□□□□□ -0.67
LSB6YJL100W NTH2P35172 780 aa10.85□□□□□ -0.67
LSB6YJL100W ARL1P38116 183 aaKnown RBP10.84□□□□□ -0.67
LSB6YJL100W ITC1P53125 1264 aa10.84□□□□□ -0.67
LSB6YJL100W KNS1P32350 737 aaPredicted RBP10.84□□□□□ -0.67
LSB6YJL100W RAD50P12753 1312 aa10.83□□□□□ -0.68
LSB6YJL100W DLD1P32891 587 aa10.83□□□□□ -0.68
LSB6YJL100W TEA1P47988 759 aa10.83□□□□□ -0.68
LSB6YJL100W SRS2P12954 1174 aa10.82□□□□□ -0.68
LSB6YJL100W RCR1P38212 213 aa10.82□□□□□ -0.68
LSB6YJL100W RFC1P38630 861 aaKnown RBP10.82□□□□□ -0.68
LSB6YJL100W YPP1P46951 817 aa10.82□□□□□ -0.68
LSB6YJL100W EDE1P34216 1381 aa10.81□□□□□ -0.68
LSB6YJL100W YKL133CP36066 463 aa10.81□□□□□ -0.68
LSB6YJL100W BRN1P38170 754 aa10.81□□□□□ -0.68
LSB6YJL100W NMD2P38798 1089 aaKnown RBP10.81□□□□□ -0.68
LSB6YJL100W MAM1P40065 302 aa10.81□□□□□ -0.68
LSB6YJL100W MEC3Q02574 474 aa10.81□□□□□ -0.68
LSB6YJL100W ECM16Q04217 1267 aaKnown RBP10.81□□□□□ -0.68
LSB6YJL100W BMS1Q08965 1183 aaKnown RBP10.81□□□□□ -0.68
LSB6YJL100W FKS3Q04952 1785 aa10.8□□□□□ -0.68
LSB6YJL100W YGR122WP53272 402 aa10.8□□□□□ -0.68
LSB6YJL100W NUP145P49687 1317 aa10.8□□□□□ -0.68
LSB6YJL100W URB1P34241 1764 aaKnown RBP10.79□□□□□ -0.68
LSB6YJL100W COQ4O13525 335 aa10.79□□□□□ -0.68
LSB6YJL100W HSP104P31539 908 aaKnown RBP10.79□□□□□ -0.68
LSB6YJL100W GCR2Q01722 534 aa10.79□□□□□ -0.68
LSB6YJL100W CTF4Q01454 927 aa10.79□□□□□ -0.68
LSB6YJL100W ROM2P51862 1356 aaKnown RBP10.79□□□□□ -0.68
LSB6YJL100W HXT13P39924 564 aa10.78□□□□□ -0.68
LSB6YJL100W RAD24P32641 659 aa10.77□□□□□ -0.68
LSB6YJL100W NOT3P06102 836 aaKnown RBP10.76□□□□□ -0.69
LSB6YJL100W RPS19AP07280 144 aaKnown RBP10.76□□□□□ -0.69
LSB6YJL100W RPS19BP07281 144 aaPredicted RBP10.76□□□□□ -0.69
LSB6YJL100W GLN1P32288 370 aaKnown RBP10.76□□□□□ -0.69
LSB6YJL100W DOT5P40553 215 aa10.76□□□□□ -0.69
LSB6YJL100W HXT17P53631 564 aa10.76□□□□□ -0.69
LSB6YJL100W NPA3P47122 385 aa10.75□□□□□ -0.69
LSB6YJL100W YMR074CQ04773 145 aa10.75□□□□□ -0.69
LSB6YJL100W AOS1Q06624 347 aa10.75□□□□□ -0.69
LSB6YJL100W YGL081WP53156 320 aa10.74□□□□□ -0.69
LSB6YJL100W TCB2P48231 1178 aa10.74□□□□□ -0.69
LSB6YJL100W ADE16P54113 591 aaKnown RBP10.72□□□□□ -0.69
LSB6YJL100W FOX2Q02207 900 aaKnown RBP10.72□□□□□ -0.69
LSB6YJL100W ATG13Q06628 738 aa10.72□□□□□ -0.69
LSB6YJL100W DUR1,2P32528 1835 aaKnown RBP10.72□□□□□ -0.69
LSB6YJL100W YRF1-3P0CX14 1859 aa10.72□□□□□ -0.69
LSB6YJL100W YRF1-7P0CX15 1859 aa10.72□□□□□ -0.69
LSB6YJL100W YRF1-6P53819 1859 aa10.72□□□□□ -0.69
LSB6YJL100W SWC3P31376 625 aa10.72□□□□□ -0.69
LSB6YJL100W CTR9P89105 1077 aa10.72□□□□□ -0.69
LSB6YJL100W HAP5Q02516 242 aa10.72□□□□□ -0.69
LSB6YJL100W FRK1Q03002 865 aaPredicted RBP10.72□□□□□ -0.69
LSB6YJL100W COBP00163 385 aa10.71□□□□□ -0.69
LSB6YJL100W YJL181WP46987 611 aa10.71□□□□□ -0.69
LSB6YJL100W VPS20Q04272 221 aa10.71□□□□□ -0.69
LSB6YJL100W LAM6Q08001 693 aa10.71□□□□□ -0.69
LSB6YJL100W INP54Q08227 384 aaKnown RBP10.71□□□□□ -0.69
LSB6YJL100W RSC1P53236 928 aa10.7□□□□□ -0.7
LSB6YJL100W NOP8Q08287 484 aaPredicted RBP10.7□□□□□ -0.7
LSB6YJL100W OSM1P21375 501 aaKnown RBP10.69□□□□□ -0.7
LSB6YJL100W RPN11P43588 306 aaKnown RBP10.69□□□□□ -0.7
LSB6YJL100W CDC16P09798 840 aa10.68□□□□□ -0.7
LSB6YJL100W GCD7P32502 381 aaPredicted RBP10.68□□□□□ -0.7
LSB6YJL100W MNN4P36044 1178 aa10.68□□□□□ -0.7
LSB6YJL100W BDP1P46678 594 aa10.68□□□□□ -0.7
LSB6YJL100W KCC4P25389 1037 aa10.68□□□□□ -0.7
LSB6YJL100W PRP40P33203 583 aaKnown RBP10.68□□□□□ -0.7
LSB6YJL100W COG8Q04632 607 aa10.68□□□□□ -0.7
LSB6YJL100W VAS1P07806 1104 aaKnown RBP10.67□□□□□ -0.7
LSB6YJL100W MRP7P12687 371 aa10.67□□□□□ -0.7
LSB6YJL100W RAD4P14736 754 aa10.67□□□□□ -0.7
LSB6YJL100W UBP1P25037 809 aa10.67□□□□□ -0.7
LSB6YJL100W CIR1P42940 261 aa10.67□□□□□ -0.7
LSB6YJL100W YOL057WQ08225 711 aa10.67□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms