RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W BUD20Q08004 166 aaPredicted RBP4.21□□□□□ -1.74
NSP1YJL041W SRB8P25648 1427 aa4.21□□□□□ -1.74
NSP1YJL041W SMC4Q12267 1418 aa4.21□□□□□ -1.74
NSP1YJL041W CDC11P32458 415 aa4.2□□□□□ -1.74
NSP1YJL041W SPT16P32558 1035 aaKnown RBP4.2□□□□□ -1.74
NSP1YJL041W VPS72Q03388 795 aa4.2□□□□□ -1.74
NSP1YJL041W SRC1Q03707 834 aa4.2□□□□□ -1.74
NSP1YJL041W TUM1Q08686 304 aaKnown RBP4.2□□□□□ -1.74
NSP1YJL041W HIF1Q12373 385 aa4.2□□□□□ -1.74
NSP1YJL041W YPK9Q12697 1472 aa4.2□□□□□ -1.74
NSP1YJL041W MYO4P32492 1471 aa4.2□□□□□ -1.74
NSP1YJL041W SSA1P10591 642 aaKnown RBP4.2□□□□□ -1.74
NSP1YJL041W KTR1P27810 393 aaKnown RBP4.2□□□□□ -1.74
NSP1YJL041W YMR124WP39523 943 aaKnown RBP4.2□□□□□ -1.74
NSP1YJL041W HUL5P53119 910 aa4.2□□□□□ -1.74
NSP1YJL041W PKH3Q03306 898 aaPredicted RBP4.2□□□□□ -1.74
NSP1YJL041W TYW1Q08960 810 aaKnown RBP4.2□□□□□ -1.74
NSP1YJL041W YVC1Q12324 675 aa4.2□□□□□ -1.74
NSP1YJL041W THO2P53552 1597 aaKnown RBP4.2□□□□□ -1.74
NSP1YJL041W ISM1P48526 1002 aa4.19□□□□□ -1.74
NSP1YJL041W LAM6Q08001 693 aa4.19□□□□□ -1.74
NSP1YJL041W RAD59Q12223 238 aa4.19□□□□□ -1.74
NSP1YJL041W SWI3P32591 825 aa4.19□□□□□ -1.74
NSP1YJL041W TLG1Q03322 224 aa4.19□□□□□ -1.74
NSP1YJL041W TY1A-DR4O74302 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-HP0C2I4 478 aaKnown RBP4.18□□□□□ -1.74
NSP1YJL041W TY1A-AP0CX57 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-PR1P0CX58 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-ORP0CX59 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-PR2P0CX60 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-DR5P0CX65 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-ER2P0CX66 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-GR3P0CX67 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-LR1P0CX68 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-MR2P0CX69 440 aa4.18□□□□□ -1.74
NSP1YJL041W NUD1P32336 851 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-JR2P47099 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-DR1Q03856 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-ML1Q04706 440 aaKnown RBP4.18□□□□□ -1.74
NSP1YJL041W TY1A-BRQ12217 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-NL2Q12470 440 aa4.18□□□□□ -1.74
NSP1YJL041W TY1A-GR2Q12485 440 aa4.18□□□□□ -1.74
NSP1YJL041W ATG32P40458 529 aa4.18□□□□□ -1.74
NSP1YJL041W YNL115CP53925 644 aa4.18□□□□□ -1.74
NSP1YJL041W YSH1Q06224 779 aaPredicted RBP4.18□□□□□ -1.74
NSP1YJL041W RRP15Q06511 250 aaPredicted RBP4.18□□□□□ -1.74
NSP1YJL041W MON2P48563 1636 aaPredicted RBP4.18□□□□□ -1.74
NSP1YJL041W RAS1P01119 309 aa4.17□□□□□ -1.74
NSP1YJL041W SEC2P17065 759 aa4.17□□□□□ -1.74
NSP1YJL041W ARG8P18544 423 aa4.17□□□□□ -1.74
NSP1YJL041W OPY1P38271 328 aa4.17□□□□□ -1.74
NSP1YJL041W SPT6P23615 1451 aaKnown RBP4.17□□□□□ -1.74
NSP1YJL041W MMS1Q06211 1407 aa4.17□□□□□ -1.74
NSP1YJL041W TIF1P10081 395 aaKnown RBP4.17□□□□□ -1.74
NSP1YJL041W ESS1P22696 170 aa4.17□□□□□ -1.74
NSP1YJL041W LTV1P34078 463 aa4.17□□□□□ -1.74
NSP1YJL041W GEF1P37020 779 aa4.17□□□□□ -1.74
NSP1YJL041W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
NSP1YJL041W NNF2P53253 936 aa4.17□□□□□ -1.74
NSP1YJL041W SAS4Q04003 481 aa4.17□□□□□ -1.74
NSP1YJL041W YPP1P46951 817 aa4.16□□□□□ -1.74
NSP1YJL041W MDG1P53885 366 aa4.16□□□□□ -1.74
NSP1YJL041W SUB2Q07478 446 aaKnown RBP4.16□□□□□ -1.74
NSP1YJL041W GYP1Q08484 637 aa4.16□□□□□ -1.74
NSP1YJL041W BUD4P47136 1447 aa4.16□□□□□ -1.74
NSP1YJL041W SLY41P22215 453 aa4.16□□□□□ -1.74
NSP1YJL041W NPL4P33755 580 aa4.16□□□□□ -1.74
NSP1YJL041W NOP8Q08287 484 aaPredicted RBP4.16□□□□□ -1.74
NSP1YJL041W NOT3P06102 836 aaKnown RBP4.15□□□□□ -1.74
NSP1YJL041W PRT1P06103 763 aaKnown RBP4.15□□□□□ -1.74
NSP1YJL041W RTG2P32608 588 aaKnown RBP4.15□□□□□ -1.74
NSP1YJL041W SEC27P41811 889 aaKnown RBP4.15□□□□□ -1.74
NSP1YJL041W MPP10P47083 593 aaKnown RBP4.15□□□□□ -1.74
NSP1YJL041W APL5Q08951 932 aaKnown RBP4.15□□□□□ -1.74
NSP1YJL041W TSC11P40061 1430 aa4.15□□□□□ -1.75
NSP1YJL041W PUS6P53294 404 aa4.15□□□□□ -1.75
NSP1YJL041W PSH1Q12161 406 aa4.15□□□□□ -1.75
NSP1YJL041W NAF1P53919 492 aaKnown RBP4.14□□□□□ -1.75
NSP1YJL041W PRP3Q03338 469 aaPredicted RBP4.14□□□□□ -1.75
NSP1YJL041W RLP24Q07915 199 aaKnown RBP4.14□□□□□ -1.75
NSP1YJL041W MAK16P10962 306 aaPredicted RBP4.14□□□□□ -1.75
NSP1YJL041W AMS1P22855 1083 aa4.14□□□□□ -1.75
NSP1YJL041W ROX1P25042 368 aa4.14□□□□□ -1.75
NSP1YJL041W SCJ1P25303 377 aa4.14□□□□□ -1.75
NSP1YJL041W ASF1P32447 279 aa4.14□□□□□ -1.75
NSP1YJL041W EFB1P32471 206 aaKnown RBP4.14□□□□□ -1.75
NSP1YJL041W NOP14Q99207 810 aaKnown RBP4.14□□□□□ -1.75
NSP1YJL041W GEA1P47102 1408 aaPredicted RBP4.13□□□□□ -1.75
NSP1YJL041W SUP45P12385 437 aaKnown RBP4.13□□□□□ -1.75
NSP1YJL041W BIO2P32451 375 aa4.13□□□□□ -1.75
NSP1YJL041W TCD1P38756 429 aa4.13□□□□□ -1.75
NSP1YJL041W YPR204WQ08995 1032 aa4.13□□□□□ -1.75
NSP1YJL041W RAD9P14737 1309 aa4.13□□□□□ -1.75
NSP1YJL041W YJU3P28321 313 aa4.13□□□□□ -1.75
NSP1YJL041W TOA1P32773 286 aa4.13□□□□□ -1.75
NSP1YJL041W RSC30P38781 883 aa4.13□□□□□ -1.75
NSP1YJL041W YNL108CP53929 270 aa4.13□□□□□ -1.75
NSP1YJL041W YNL050CP53952 270 aa4.13□□□□□ -1.75
NSP1YJL041W TBF1Q02457 562 aa4.13□□□□□ -1.75
NSP1YJL041W VPS30Q02948 557 aa4.13□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms