RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C NPL4P33755 580 aa5.15□□□□□ -1.58
SHQ1YIL104C STR2P47164 639 aa5.15□□□□□ -1.58
SHQ1YIL104C YDR090CQ03193 310 aa5.15□□□□□ -1.58
SHQ1YIL104C NUP170P38181 1502 aa5.14□□□□□ -1.59
SHQ1YIL104C MLP2P40457 1679 aa5.14□□□□□ -1.59
SHQ1YIL104C GAP1P19145 602 aaPredicted RBP5.14□□□□□ -1.59
SHQ1YIL104C ISM1P48526 1002 aa5.14□□□□□ -1.59
SHQ1YIL104C GBP2P25555 427 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
SHQ1YIL104C NUD1P32336 851 aa5.13□□□□□ -1.59
SHQ1YIL104C CAT8P39113 1433 aa5.13□□□□□ -1.59
SHQ1YIL104C TUM1Q08686 304 aaKnown RBP5.13□□□□□ -1.59
SHQ1YIL104C GAR1P28007 205 aaKnown RBP5.12□□□□□ -1.59
SHQ1YIL104C CKB1P43639 278 aa5.12□□□□□ -1.59
SHQ1YIL104C BUD3P25558 1636 aa5.11□□□□□ -1.59
SHQ1YIL104C ARO1P08566 1588 aaKnown RBP5.11□□□□□ -1.59
SHQ1YIL104C SPT16P32558 1035 aaKnown RBP5.11□□□□□ -1.59
SHQ1YIL104C AIR1P40507 360 aaKnown RBP5.11□□□□□ -1.59
SHQ1YIL104C CST6P40535 587 aa5.11□□□□□ -1.59
SHQ1YIL104C GCD11P32481 527 aaKnown RBP5.09□□□□□ -1.59
SHQ1YIL104C REF2P42073 533 aaPredicted RBP5.09□□□□□ -1.59
SHQ1YIL104C LAM6Q08001 693 aa5.08□□□□□ -1.6
SHQ1YIL104C SSM4P40318 1319 aa5.08□□□□□ -1.6
SHQ1YIL104C CDC4P07834 779 aa5.07□□□□□ -1.6
SHQ1YIL104C CLA4P48562 842 aa5.07□□□□□ -1.6
SHQ1YIL104C YBT1P32386 1661 aa5.07□□□□□ -1.6
SHQ1YIL104C PAT1P25644 796 aaKnown RBP5.07□□□□□ -1.6
SHQ1YIL104C TRM3Q07527 1436 aa5.06□□□□□ -1.6
SHQ1YIL104C BNR1P40450 1375 aa5.06□□□□□ -1.6
SHQ1YIL104C IKI3Q06706 1349 aaKnown RBP5.06□□□□□ -1.6
SHQ1YIL104C ORC6P38826 435 aa5.06□□□□□ -1.6
SHQ1YIL104C FRK1Q03002 865 aaPredicted RBP5.06□□□□□ -1.6
SHQ1YIL104C DNF2Q12675 1612 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-DR4O74302 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-HP0C2I4 478 aaKnown RBP5.05□□□□□ -1.6
SHQ1YIL104C TY1A-AP0CX57 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-PR1P0CX58 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-ORP0CX59 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-PR2P0CX60 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-DR5P0CX65 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-ER2P0CX66 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-GR3P0CX67 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-LR1P0CX68 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-MR2P0CX69 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-JR2P47099 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-DR1Q03856 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-ML1Q04706 440 aaKnown RBP5.05□□□□□ -1.6
SHQ1YIL104C TY1A-BRQ12217 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-NL2Q12470 440 aa5.05□□□□□ -1.6
SHQ1YIL104C TY1A-GR2Q12485 440 aa5.05□□□□□ -1.6
SHQ1YIL104C DOP1Q03921 1698 aa5.05□□□□□ -1.6
SHQ1YIL104C SRB8P25648 1427 aa5.04□□□□□ -1.6
SHQ1YIL104C SEC2P17065 759 aa5.04□□□□□ -1.6
SHQ1YIL104C RRN7P40992 514 aa5.02□□□□□ -1.61
SHQ1YIL104C YPR148CQ06523 435 aa5.02□□□□□ -1.61
SHQ1YIL104C MAK21Q12176 1025 aaKnown RBP5.02□□□□□ -1.61
SHQ1YIL104C MET22P32179 357 aa5.02□□□□□ -1.61
SHQ1YIL104C YAP3P38749 330 aa5.02□□□□□ -1.61
SHQ1YIL104C MVP1P40959 511 aaKnown RBP5.02□□□□□ -1.61
SHQ1YIL104C BDP1P46678 594 aa5.02□□□□□ -1.61
SHQ1YIL104C HED1Q03937 162 aa5.02□□□□□ -1.61
SHQ1YIL104C ENV9Q08651 330 aa5.02□□□□□ -1.61
SHQ1YIL104C SEC7P11075 2009 aaKnown RBP5.01□□□□□ -1.61
SHQ1YIL104C BUD21Q08492 214 aaPredicted RBP5.01□□□□□ -1.61
SHQ1YIL104C COX6P00427 148 aa5□□□□□ -1.61
SHQ1YIL104C TYS1P36421 394 aaKnown RBP5□□□□□ -1.61
SHQ1YIL104C YPR109WQ06104 294 aa5□□□□□ -1.61
SHQ1YIL104C YOR093CQ12275 1648 aa4.98□□□□□ -1.61
SHQ1YIL104C IPL1P38991 367 aa4.97□□□□□ -1.61
SHQ1YIL104C PDR11P40550 1411 aa4.97□□□□□ -1.61
SHQ1YIL104C YDR444WQ04093 687 aa4.97□□□□□ -1.61
SHQ1YIL104C RGR1P19263 1082 aa4.97□□□□□ -1.61
SHQ1YIL104C CHC1P22137 1653 aaKnown RBP4.96□□□□□ -1.62
SHQ1YIL104C VPS70P47161 811 aa4.95□□□□□ -1.62
SHQ1YIL104C MAK10Q02197 733 aa4.95□□□□□ -1.62
SHQ1YIL104C HST3P53687 447 aa4.94□□□□□ -1.62
SHQ1YIL104C KEX2P13134 814 aa4.93□□□□□ -1.62
SHQ1YIL104C ASH1P34233 588 aa4.93□□□□□ -1.62
SHQ1YIL104C PDR5P33302 1511 aaKnown RBP4.93□□□□□ -1.62
SHQ1YIL104C VMR1P38735 1592 aa4.93□□□□□ -1.62
SHQ1YIL104C AFT1P22149 690 aa4.92□□□□□ -1.62
SHQ1YIL104C LCB5Q06147 687 aaKnown RBP4.92□□□□□ -1.62
SHQ1YIL104C URN1Q06525 465 aaKnown RBP4.92□□□□□ -1.62
SHQ1YIL104C ERF2Q06551 359 aa4.91□□□□□ -1.62
SHQ1YIL104C MET32Q12041 191 aa4.91□□□□□ -1.62
SHQ1YIL104C MOD5P07884 428 aa4.9□□□□□ -1.63
SHQ1YIL104C DNF3Q12674 1656 aa4.89□□□□□ -1.63
SHQ1YIL104C PAC1P39946 494 aaKnown RBP4.89□□□□□ -1.63
SHQ1YIL104C CLB5P30283 435 aa4.88□□□□□ -1.63
SHQ1YIL104C NUP188P52593 1655 aaKnown RBP4.87□□□□□ -1.63
SHQ1YIL104C PSE1P32337 1089 aaKnown RBP4.87□□□□□ -1.63
SHQ1YIL104C YDL176WQ12027 708 aa4.87□□□□□ -1.63
SHQ1YIL104C RRD1P40454 393 aaKnown RBP4.87□□□□□ -1.63
SHQ1YIL104C PUS5Q06244 254 aa4.87□□□□□ -1.63
SHQ1YIL104C IML1P47170 1584 aa4.86□□□□□ -1.63
SHQ1YIL104C RTF1P53064 558 aa4.86□□□□□ -1.63
SHQ1YIL104C TUB4P53378 473 aa4.86□□□□□ -1.63
SHQ1YIL104C AGE1Q04412 482 aa4.85□□□□□ -1.63
SHQ1YIL104C YJR115WP47152 169 aa4.84□□□□□ -1.63
SHQ1YIL104C RAV1P47104 1357 aa4.84□□□□□ -1.64
SHQ1YIL104C HAP1P0CE41 1502 aa4.84□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms