RNA–Protein interactions for RNA: YIL072W

HOP1, Transcript of Meiosis-specific protein required for chromosome synapsis, yeast

Gene HOP1, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOP1	YIL072W	TEC1	P18412	486 aa		4.9	□□□□□ -1.63
HOP1	YIL072W	RAS1	P01119	309 aa		4.89	□□□□□ -1.63
HOP1	YIL072W	MRT4	P33201	236 aa	Known RBP	4.89	□□□□□ -1.63
HOP1	YIL072W	CDC4	P07834	779 aa		4.88	□□□□□ -1.63
HOP1	YIL072W	APL6	P46682	809 aa		4.88	□□□□□ -1.63
HOP1	YIL072W	YNL108C	P53929	270 aa		4.88	□□□□□ -1.63
HOP1	YIL072W	MCM16	Q12262	181 aa		4.88	□□□□□ -1.63
HOP1	YIL072W	GUT2	P32191	649 aa		4.88	□□□□□ -1.63
HOP1	YIL072W	SIS2	P36024	562 aa		4.88	□□□□□ -1.63
HOP1	YIL072W	FRK1	Q03002	865 aa	Predicted RBP	4.88	□□□□□ -1.63
HOP1	YIL072W	RIM21	P48565	533 aa		4.87	□□□□□ -1.63
HOP1	YIL072W	UTP13	Q05946	817 aa	Known RBP	4.87	□□□□□ -1.63
HOP1	YIL072W	ATG3	P40344	310 aa		4.86	□□□□□ -1.63
HOP1	YIL072W	EMW1	P42842	904 aa	Known RBP	4.86	□□□□□ -1.63
HOP1	YIL072W	ENO2	P00925	437 aa	Known RBP	4.86	□□□□□ -1.63
HOP1	YIL072W	IXR1	P33417	597 aa		4.85	□□□□□ -1.63
HOP1	YIL072W	STE20	Q03497	939 aa	Known RBP	4.85	□□□□□ -1.63
HOP1	YIL072W	SRC1	Q03707	834 aa		4.85	□□□□□ -1.63
HOP1	YIL072W	MRX10	Q05648	414 aa		4.85	□□□□□ -1.63
HOP1	YIL072W	SUB2	Q07478	446 aa	Known RBP	4.85	□□□□□ -1.63
HOP1	YIL072W	AFT1	P22149	690 aa		4.84	□□□□□ -1.63
HOP1	YIL072W	KIP2	P28743	706 aa		4.84	□□□□□ -1.63
HOP1	YIL072W	MSB3	P48566	633 aa	Predicted RBP	4.84	□□□□□ -1.63
HOP1	YIL072W	TRK1	P12685	1235 aa		4.83	□□□□□ -1.64
HOP1	YIL072W	RTG2	P32608	588 aa	Known RBP	4.83	□□□□□ -1.64
HOP1	YIL072W	PUS5	Q06244	254 aa		4.83	□□□□□ -1.64
HOP1	YIL072W	RDS2	P19541	446 aa	Known RBP	4.83	□□□□□ -1.64
HOP1	YIL072W	RPL34B	P40525	121 aa	Known RBP	4.83	□□□□□ -1.64
HOP1	YIL072W	ENO1	P00924	437 aa	Known RBP	4.82	□□□□□ -1.64
HOP1	YIL072W	MET32	Q12041	191 aa		4.82	□□□□□ -1.64
HOP1	YIL072W	TTI1	P36097	1038 aa		4.81	□□□□□ -1.64
HOP1	YIL072W	YBL086C	P38177	466 aa		4.81	□□□□□ -1.64
HOP1	YIL072W	EMP47	P43555	445 aa		4.81	□□□□□ -1.64
HOP1	YIL072W	CLA4	P48562	842 aa		4.81	□□□□□ -1.64
HOP1	YIL072W	YPR204W	Q08995	1032 aa		4.81	□□□□□ -1.64
HOP1	YIL072W	SSA1	P10591	642 aa	Known RBP	4.8	□□□□□ -1.64
HOP1	YIL072W	PEP12	P32854	288 aa		4.8	□□□□□ -1.64
HOP1	YIL072W	YML020W	Q03722	664 aa		4.8	□□□□□ -1.64
HOP1	YIL072W	CPS1	P27614	576 aa		4.79	□□□□□ -1.64
HOP1	YIL072W	ISF1	P32488	338 aa		4.79	□□□□□ -1.64
HOP1	YIL072W	FBP26	P32604	452 aa		4.79	□□□□□ -1.64
HOP1	YIL072W	AIR1	P40507	360 aa	Known RBP	4.79	□□□□□ -1.64
HOP1	YIL072W	NOP8	Q08287	484 aa	Predicted RBP	4.79	□□□□□ -1.64
HOP1	YIL072W	NOB1	Q08444	459 aa	Known RBP	4.79	□□□□□ -1.64
HOP1	YIL072W	GEF1	P37020	779 aa		4.79	□□□□□ -1.64
HOP1	YIL072W	ITT1	Q04638	464 aa		4.79	□□□□□ -1.64
HOP1	YIL072W	RPP2B	P02400	110 aa	Known RBP	4.78	□□□□□ -1.64
HOP1	YIL072W	SPT2	P06843	333 aa	Predicted RBP	4.78	□□□□□ -1.64
HOP1	YIL072W	STE6	P12866	1290 aa		4.78	□□□□□ -1.64
HOP1	YIL072W	HST3	P53687	447 aa		4.77	□□□□□ -1.65
HOP1	YIL072W	ATG20	Q07528	640 aa		4.77	□□□□□ -1.65
HOP1	YIL072W	MKS1	P34072	584 aa		4.76	□□□□□ -1.65
HOP1	YIL072W	ASH1	P34233	588 aa		4.76	□□□□□ -1.65
HOP1	YIL072W	SLX8	P40072	274 aa		4.76	□□□□□ -1.65
HOP1	YIL072W	ISU1	Q03020	165 aa		4.76	□□□□□ -1.65
HOP1	YIL072W	PUP1	P25043	261 aa		4.76	□□□□□ -1.65
HOP1	YIL072W	BRE2	P43132	505 aa		4.76	□□□□□ -1.65
HOP1	YIL072W	GCR2	Q01722	534 aa		4.75	□□□□□ -1.65
HOP1	YIL072W	YML083C	Q04526	418 aa		4.75	□□□□□ -1.65
HOP1	YIL072W	SSA4	P22202	642 aa	Known RBP	4.74	□□□□□ -1.65
HOP1	YIL072W	UGA3	P26370	528 aa		4.73	□□□□□ -1.65
HOP1	YIL072W	YFL034W	P43564	1073 aa		4.73	□□□□□ -1.65
HOP1	YIL072W	APP1	P53933	587 aa		4.73	□□□□□ -1.65
HOP1	YIL072W	ARG82	P07250	355 aa		4.72	□□□□□ -1.65
HOP1	YIL072W	TGL4	P36165	910 aa		4.72	□□□□□ -1.65
HOP1	YIL072W	SOH1	P38633	127 aa		4.72	□□□□□ -1.65
HOP1	YIL072W	HAL5	P38970	855 aa	Known RBP	4.72	□□□□□ -1.65
HOP1	YIL072W	AAD14	P42884	376 aa		4.72	□□□□□ -1.65
HOP1	YIL072W	VTC4	P47075	721 aa		4.72	□□□□□ -1.65
HOP1	YIL072W	ISR1	Q06098	443 aa	Known RBP	4.72	□□□□□ -1.65
HOP1	YIL072W	ENV9	Q08651	330 aa		4.72	□□□□□ -1.65
HOP1	YIL072W	NUP85	P46673	744 aa		4.72	□□□□□ -1.65
HOP1	YIL072W	PTK2	P47116	818 aa	Known RBP	4.72	□□□□□ -1.65
HOP1	YIL072W	BDS1	Q08347	646 aa		4.72	□□□□□ -1.65
HOP1	YIL072W	YJR115W	P47152	169 aa		4.71	□□□□□ -1.66
HOP1	YIL072W	HAP4	P14064	554 aa		4.7	□□□□□ -1.66
HOP1	YIL072W	UBP1	P25037	809 aa		4.7	□□□□□ -1.66
HOP1	YIL072W	PHO87	P25360	923 aa		4.7	□□□□□ -1.66
HOP1	YIL072W	DFG5	Q05031	458 aa		4.7	□□□□□ -1.66
HOP1	YIL072W	GAS4	Q08271	471 aa		4.7	□□□□□ -1.66
HOP1	YIL072W	TSC13	Q99190	310 aa		4.7	□□□□□ -1.66
HOP1	YIL072W	UTR2	P32623	467 aa		4.69	□□□□□ -1.66
HOP1	YIL072W	GAL2	P13181	574 aa		4.69	□□□□□ -1.66
HOP1	YIL072W	HDA3	Q06623	655 aa		4.69	□□□□□ -1.66
HOP1	YIL072W	MCM1	P11746	286 aa		4.68	□□□□□ -1.66
HOP1	YIL072W	AIM9	P40053	627 aa	Known RBP	4.68	□□□□□ -1.66
HOP1	YIL072W	TBS1	P38114	1094 aa		4.67	□□□□□ -1.66
HOP1	YIL072W	KTR7	P40504	517 aa		4.67	□□□□□ -1.66
HOP1	YIL072W	MSN5	P52918	1224 aa		4.67	□□□□□ -1.66
HOP1	YIL072W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
HOP1	YIL072W	WTM2	Q12206	467 aa		4.67	□□□□□ -1.66
HOP1	YIL072W	GLY1	P37303	387 aa	Known RBP	4.67	□□□□□ -1.66
HOP1	YIL072W	DLD3	P39976	496 aa	Known RBP	4.67	□□□□□ -1.66
HOP1	YIL072W	SRF1	Q12516	437 aa		4.67	□□□□□ -1.66
HOP1	YIL072W	LSC2	P53312	427 aa		4.66	□□□□□ -1.66
HOP1	YIL072W	ECM23	Q02710	187 aa		4.66	□□□□□ -1.66
HOP1	YIL072W	YLR346C	Q06139	101 aa		4.66	□□□□□ -1.66
HOP1	YIL072W	LCB5	Q06147	687 aa	Known RBP	4.66	□□□□□ -1.66
HOP1	YIL072W	YPQ2	Q06328	317 aa		4.66	□□□□□ -1.66
HOP1	YIL072W	SUM1	P46676	1062 aa		4.65	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms