RNA–Protein interactions for RNA: YIL050W

PCL7, Transcript of Pho85p cyclin of the Pho80p subfamily, yeast

Gene PCL7, Length 858 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL7	YIL050W	SIS2	P36024	562 aa		6.7	□□□□□ -1.34
PCL7	YIL050W	MOD5	P07884	428 aa		6.69	□□□□□ -1.34
PCL7	YIL050W	SSA1	P10591	642 aa	Known RBP	6.69	□□□□□ -1.34
PCL7	YIL050W	CPS1	P27614	576 aa		6.69	□□□□□ -1.34
PCL7	YIL050W	FIG4	P42837	879 aa		6.69	□□□□□ -1.34
PCL7	YIL050W	KXD1	P53158	218 aa		6.69	□□□□□ -1.34
PCL7	YIL050W	TRK1	P12685	1235 aa		6.68	□□□□□ -1.34
PCL7	YIL050W	SPT16	P32558	1035 aa	Known RBP	6.68	□□□□□ -1.34
PCL7	YIL050W	PEP12	P32854	288 aa		6.68	□□□□□ -1.34
PCL7	YIL050W	HXT10	P43581	546 aa		6.68	□□□□□ -1.34
PCL7	YIL050W	YPR084W	Q06821	456 aa		6.68	□□□□□ -1.34
PCL7	YIL050W	TEC1	P18412	486 aa		6.67	□□□□□ -1.34
PCL7	YIL050W	RDS2	P19541	446 aa	Known RBP	6.67	□□□□□ -1.34
PCL7	YIL050W	FRA1	Q07825	749 aa		6.67	□□□□□ -1.34
PCL7	YIL050W	SDH2	P21801	266 aa		6.66	□□□□□ -1.34
PCL7	YIL050W	GEF1	P37020	779 aa		6.65	□□□□□ -1.34
PCL7	YIL050W	RRD1	P40454	393 aa	Known RBP	6.65	□□□□□ -1.34
PCL7	YIL050W	MRX12	P47084	519 aa		6.65	□□□□□ -1.34
PCL7	YIL050W	VAC17	P25591	423 aa		6.64	□□□□□ -1.35
PCL7	YIL050W	GUT2	P32191	649 aa		6.64	□□□□□ -1.35
PCL7	YIL050W	EMP47	P43555	445 aa		6.64	□□□□□ -1.35
PCL7	YIL050W	NOB1	Q08444	459 aa	Known RBP	6.64	□□□□□ -1.35
PCL7	YIL050W	ISF1	P32488	338 aa		6.63	□□□□□ -1.35
PCL7	YIL050W	APL6	P46682	809 aa		6.63	□□□□□ -1.35
PCL7	YIL050W	PUP1	P25043	261 aa		6.62	□□□□□ -1.35
PCL7	YIL050W	STE20	Q03497	939 aa	Known RBP	6.62	□□□□□ -1.35
PCL7	YIL050W	TGL4	P36165	910 aa		6.61	□□□□□ -1.35
PCL7	YIL050W	UTP13	Q05946	817 aa	Known RBP	6.6	□□□□□ -1.35
PCL7	YIL050W	ATG3	P40344	310 aa		6.59	□□□□□ -1.35
PCL7	YIL050W	FRK1	Q03002	865 aa	Predicted RBP	6.57	□□□□□ -1.36
PCL7	YIL050W	YML083C	Q04526	418 aa		6.57	□□□□□ -1.36
PCL7	YIL050W	ENV9	Q08651	330 aa		6.57	□□□□□ -1.36
PCL7	YIL050W	GAL2	P13181	574 aa		6.54	□□□□□ -1.36
PCL7	YIL050W	SOH1	P38633	127 aa		6.54	□□□□□ -1.36
PCL7	YIL050W	CST6	P40535	587 aa		6.54	□□□□□ -1.36
PCL7	YIL050W	BDP1	P46678	594 aa		6.54	□□□□□ -1.36
PCL7	YIL050W	IXR1	P33417	597 aa		6.53	□□□□□ -1.36
PCL7	YIL050W	KTR7	P40504	517 aa		6.52	□□□□□ -1.37
PCL7	YIL050W	PHO87	P25360	923 aa		6.51	□□□□□ -1.37
PCL7	YIL050W	SLX8	P40072	274 aa		6.51	□□□□□ -1.37
PCL7	YIL050W	EMW1	P42842	904 aa	Known RBP	6.51	□□□□□ -1.37
PCL7	YIL050W	RPL34A	P87262	121 aa	Predicted RBP	6.51	□□□□□ -1.37
PCL7	YIL050W	ECM23	Q02710	187 aa		6.51	□□□□□ -1.37
PCL7	YIL050W	SYH1	Q02875	849 aa	Known RBP	6.51	□□□□□ -1.37
PCL7	YIL050W	PUS5	Q06244	254 aa		6.51	□□□□□ -1.37
PCL7	YIL050W	NOP8	Q08287	484 aa	Predicted RBP	6.51	□□□□□ -1.37
PCL7	YIL050W	CDC3	P32457	520 aa	Known RBP	6.5	□□□□□ -1.37
PCL7	YIL050W	HAL5	P38970	855 aa	Known RBP	6.5	□□□□□ -1.37
PCL7	YIL050W	GCR2	Q01722	534 aa		6.5	□□□□□ -1.37
PCL7	YIL050W	YML020W	Q03722	664 aa		6.5	□□□□□ -1.37
PCL7	YIL050W	ITT1	Q04638	464 aa		6.5	□□□□□ -1.37
PCL7	YIL050W	KIP2	P28743	706 aa		6.49	□□□□□ -1.37
PCL7	YIL050W	HAP4	P14064	554 aa		6.48	□□□□□ -1.37
PCL7	YIL050W	MRT4	P33201	236 aa	Known RBP	6.48	□□□□□ -1.37
PCL7	YIL050W	AIR1	P40507	360 aa	Known RBP	6.48	□□□□□ -1.37
PCL7	YIL050W	BRE2	P43132	505 aa		6.48	□□□□□ -1.37
PCL7	YIL050W	ACS2	P52910	683 aa	Known RBP	6.48	□□□□□ -1.37
PCL7	YIL050W	YPL062W	Q02781	134 aa		6.48	□□□□□ -1.37
PCL7	YIL050W	ISR1	Q06098	443 aa	Known RBP	6.48	□□□□□ -1.37
PCL7	YIL050W	ATG20	Q07528	640 aa		6.48	□□□□□ -1.37
PCL7	YIL050W	TSC13	Q99190	310 aa		6.47	□□□□□ -1.37
PCL7	YIL050W	UBX7	P38349	436 aa		6.46	□□□□□ -1.38
PCL7	YIL050W	ROM1	P53046	1155 aa		6.46	□□□□□ -1.38
PCL7	YIL050W	GAS4	Q08271	471 aa		6.46	□□□□□ -1.38
PCL7	YIL050W	CLA4	P48562	842 aa		6.45	□□□□□ -1.38
PCL7	YIL050W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.45	□□□□□ -1.38	not detected
PCL7	YIL050W	SPT2	P06843	333 aa	Predicted RBP	6.44	□□□□□ -1.38
PCL7	YIL050W	CDC4	P07834	779 aa		6.44	□□□□□ -1.38
PCL7	YIL050W	YFL034W	P43564	1073 aa		6.44	□□□□□ -1.38
PCL7	YIL050W	APP1	P53933	587 aa		6.44	□□□□□ -1.38
PCL7	YIL050W	CWC15	Q03772	175 aa	Known RBP	6.44	□□□□□ -1.38
PCL7	YIL050W	HED1	Q03937	162 aa		6.44	□□□□□ -1.38
PCL7	YIL050W	PUF6	Q04373	656 aa	Known RBP	6.44	□□□□□ -1.38
PCL7	YIL050W	HDA3	Q06623	655 aa		6.44	□□□□□ -1.38
PCL7	YIL050W	FBP26	P32604	452 aa		6.43	□□□□□ -1.38
PCL7	YIL050W	ISU1	Q03020	165 aa		6.43	□□□□□ -1.38
PCL7	YIL050W	MIP1	P15801	1254 aa		6.42	□□□□□ -1.38
PCL7	YIL050W	PDI1	P17967	522 aa	Known RBP	6.42	□□□□□ -1.38
PCL7	YIL050W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.42	□□□□□ -1.38	not detected
PCL7	YIL050W	YBL086C	P38177	466 aa		6.42	□□□□□ -1.38
PCL7	YIL050W	SSF1	P38789	453 aa	Predicted RBP	6.42	□□□□□ -1.38
PCL7	YIL050W	AIM9	P40053	627 aa	Known RBP	6.42	□□□□□ -1.38
PCL7	YIL050W	STE6	P12866	1290 aa		6.41	□□□□□ -1.38
PCL7	YIL050W	MKS1	P34072	584 aa		6.41	□□□□□ -1.38
PCL7	YIL050W	TPS3	P38426	1054 aa	Known RBP	6.41	□□□□□ -1.38
PCL7	YIL050W	UBP1	P25037	809 aa		6.4	□□□□□ -1.38
PCL7	YIL050W	GAR1	P28007	205 aa	Known RBP	6.39	□□□□□ -1.39
PCL7	YIL050W	UTR2	P32623	467 aa		6.39	□□□□□ -1.39
PCL7	YIL050W	NTH2	P35172	780 aa		6.39	□□□□□ -1.39
PCL7	YIL050W	RTT106	P40161	455 aa		6.39	□□□□□ -1.39
PCL7	YIL050W	RPS6A	P0CX37	236 aa	Known RBP	6.38	□□□□□ -1.39
PCL7	YIL050W	RPS6B	P0CX38	236 aa	Predicted RBP	6.38	□□□□□ -1.39
PCL7	YIL050W	VAN1	P23642	535 aa		6.38	□□□□□ -1.39
PCL7	YIL050W	HST3	P53687	447 aa		6.38	□□□□□ -1.39
PCL7	YIL050W	HAT1	Q12341	374 aa		6.38	□□□□□ -1.39
PCL7	YIL050W	SRS2	P12954	1174 aa		6.37	□□□□□ -1.39
PCL7	YIL050W	MET32	Q12041	191 aa		6.37	□□□□□ -1.39
PCL7	YIL050W	SWI5	P08153	709 aa		6.36	□□□□□ -1.39
PCL7	YIL050W	DFG5	Q05031	458 aa		6.36	□□□□□ -1.39
PCL7	YIL050W	WTM2	Q12206	467 aa		6.36	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 98.1 ms