RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W KTR1P27810 393 aaKnown RBP6.58□□□□□ -1.36
NMD3YHR170W HAP5Q02516 242 aa6.58□□□□□ -1.36
NMD3YHR170W SSM4P40318 1319 aa6.57□□□□□ -1.36
NMD3YHR170W ARO1P08566 1588 aaKnown RBP6.57□□□□□ -1.36
NMD3YHR170W CAT8P39113 1433 aa6.57□□□□□ -1.36
NMD3YHR170W CSN12P47130 423 aa6.57□□□□□ -1.36
NMD3YHR170W FPK1P53739 893 aa6.57□□□□□ -1.36
NMD3YHR170W TYW1Q08960 810 aaKnown RBP6.57□□□□□ -1.36
NMD3YHR170W SIT4P20604 311 aa6.56□□□□□ -1.36
NMD3YHR170W BMT6Q12291 365 aa6.56□□□□□ -1.36
NMD3YHR170W SCJ1P25303 377 aa6.55□□□□□ -1.36
NMD3YHR170W LTE1P07866 1435 aa6.55□□□□□ -1.36
NMD3YHR170W RAM1P22007 431 aa6.53□□□□□ -1.36
NMD3YHR170W HPC2Q01448 625 aa6.53□□□□□ -1.36
NMD3YHR170W ELP4Q02884 456 aaKnown RBP6.53□□□□□ -1.36
NMD3YHR170W BNI1P41832 1953 aa6.53□□□□□ -1.36
NMD3YHR170W YJL171CP46992 396 aa6.52□□□□□ -1.36
NMD3YHR170W HST2P53686 357 aa6.52□□□□□ -1.36
NMD3YHR170W NUD1P32336 851 aa6.52□□□□□ -1.37
NMD3YHR170W BNI4P53858 892 aa6.52□□□□□ -1.37
NMD3YHR170W ERF2Q06551 359 aa6.52□□□□□ -1.37
NMD3YHR170W IQG1Q12280 1495 aa6.51□□□□□ -1.37
NMD3YHR170W PRE3P38624 215 aa6.51□□□□□ -1.37
NMD3YHR170W STR2P47164 639 aa6.51□□□□□ -1.37
NMD3YHR170W ISM1P48526 1002 aa6.51□□□□□ -1.37
NMD3YHR170W TFB3Q03290 321 aa6.51□□□□□ -1.37
NMD3YHR170W YPR015CQ12531 247 aa6.51□□□□□ -1.37
NMD3YHR170W DOP1Q03921 1698 aa6.51□□□□□ -1.37
NMD3YHR170W SPT23P35210 1082 aa6.5□□□□□ -1.37
NMD3YHR170W YMR196WQ04336 1088 aa6.5□□□□□ -1.37
NMD3YHR170W ESS1P22696 170 aa6.49□□□□□ -1.37
NMD3YHR170W GLN1P32288 370 aaKnown RBP6.49□□□□□ -1.37
NMD3YHR170W MMP1Q12372 583 aa6.49□□□□□ -1.37
NMD3YHR170W KEX2P13134 814 aa6.48□□□□□ -1.37
NMD3YHR170W PKC1P24583 1151 aa6.48□□□□□ -1.37
NMD3YHR170W SRB8P25648 1427 aa6.48□□□□□ -1.37
NMD3YHR170W YSP2Q06681 1438 aa6.48□□□□□ -1.37
NMD3YHR170W SEC7P11075 2009 aaKnown RBP6.48□□□□□ -1.37
NMD3YHR170W SSA2P10592 639 aaKnown RBP6.48□□□□□ -1.37
NMD3YHR170W ITT1Q04638 464 aa6.48□□□□□ -1.37
NMD3YHR170W DRS2P39524 1355 aa6.47□□□□□ -1.37
NMD3YHR170W CHL1P22516 861 aaPredicted RBP6.47□□□□□ -1.37
NMD3YHR170W YJU3P28321 313 aa6.47□□□□□ -1.37
NMD3YHR170W YNL115CP53925 644 aa6.47□□□□□ -1.37
NMD3YHR170W BUD20Q08004 166 aaPredicted RBP6.47□□□□□ -1.37
NMD3YHR170W TY1A-DR4O74302 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-HP0C2I4 478 aaKnown RBP6.46□□□□□ -1.38
NMD3YHR170W TY1A-AP0CX57 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-PR1P0CX58 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-ORP0CX59 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-PR2P0CX60 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-DR5P0CX65 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-ER2P0CX66 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-GR3P0CX67 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-LR1P0CX68 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-MR2P0CX69 440 aa6.46□□□□□ -1.38
NMD3YHR170W SEC2P17065 759 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-JR2P47099 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-DR1Q03856 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-ML1Q04706 440 aaKnown RBP6.46□□□□□ -1.38
NMD3YHR170W TY1A-BRQ12217 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-NL2Q12470 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-GR2Q12485 440 aa6.46□□□□□ -1.38
NMD3YHR170W PTC2P39966 464 aaKnown RBP6.45□□□□□ -1.38
NMD3YHR170W RTF1P53064 558 aa6.45□□□□□ -1.38
NMD3YHR170W YML082WQ04533 649 aaKnown RBP6.45□□□□□ -1.38
NMD3YHR170W CHC1P22137 1653 aaKnown RBP6.45□□□□□ -1.38
NMD3YHR170W SLY41P22215 453 aa6.44□□□□□ -1.38
NMD3YHR170W PKH3Q03306 898 aaPredicted RBP6.44□□□□□ -1.38
NMD3YHR170W NPL4P33755 580 aa6.43□□□□□ -1.38
NMD3YHR170W RSC30P38781 883 aa6.43□□□□□ -1.38
NMD3YHR170W RAD59Q12223 238 aa6.43□□□□□ -1.38
NMD3YHR170W GCD11P32481 527 aaKnown RBP6.42□□□□□ -1.38
NMD3YHR170W BRL1P38770 471 aa6.42□□□□□ -1.38
NMD3YHR170W AGE1Q04412 482 aa6.41□□□□□ -1.38
NMD3YHR170W BNR1P40450 1375 aa6.41□□□□□ -1.38
NMD3YHR170W BUD21Q08492 214 aaPredicted RBP6.4□□□□□ -1.38
NMD3YHR170W GCN2P15442 1659 aa6.4□□□□□ -1.38
NMD3YHR170W MMS1Q06211 1407 aa6.4□□□□□ -1.39
NMD3YHR170W TRM3Q07527 1436 aa6.4□□□□□ -1.39
NMD3YHR170W HGH1P48362 394 aaKnown RBP6.39□□□□□ -1.39
NMD3YHR170W PRT1P06103 763 aaKnown RBP6.38□□□□□ -1.39
NMD3YHR170W TRM1P15565 570 aaKnown RBP6.38□□□□□ -1.39
NMD3YHR170W ARG8P18544 423 aa6.38□□□□□ -1.39
NMD3YHR170W TUB4P53378 473 aa6.38□□□□□ -1.39
NMD3YHR170W DNF2Q12675 1612 aa6.37□□□□□ -1.39
NMD3YHR170W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
NMD3YHR170W PUS6P53294 404 aa6.36□□□□□ -1.39
NMD3YHR170W YOR093CQ12275 1648 aa6.36□□□□□ -1.39
NMD3YHR170W YJL007CP47080 104 aa6.35□□□□□ -1.39
NMD3YHR170W LAM6Q08001 693 aa6.35□□□□□ -1.39
NMD3YHR170W VMR1P38735 1592 aa6.35□□□□□ -1.39
NMD3YHR170W BIM1P40013 344 aa6.35□□□□□ -1.39
NMD3YHR170W YBL036CP38197 257 aa6.34□□□□□ -1.39
NMD3YHR170W PAC1P39946 494 aaKnown RBP6.34□□□□□ -1.39
NMD3YHR170W ATG32P40458 529 aa6.34□□□□□ -1.39
NMD3YHR170W BIO2P32451 375 aa6.33□□□□□ -1.4
NMD3YHR170W VRP1P37370 817 aa6.33□□□□□ -1.4
NMD3YHR170W RLF2Q12495 606 aa6.33□□□□□ -1.4
NMD3YHR170W NUP188P52593 1655 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 172.8 ms