RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C KEL3Q08979 651 aaPredicted RBP3.21□□□□□ -1.9
PRP8YHR165C LSP1Q12230 341 aaKnown RBP3.21□□□□□ -1.9
PRP8YHR165C YOL098CQ12496 1037 aa3.21□□□□□ -1.9
PRP8YHR165C VMA4P22203 233 aaKnown RBP3.21□□□□□ -1.9
PRP8YHR165C RTT105P40063 208 aa3.21□□□□□ -1.9
PRP8YHR165C BTN2P53286 410 aa3.2□□□□□ -1.9
PRP8YHR165C NOP15P53927 220 aaPredicted RBP3.2□□□□□ -1.9
PRP8YHR165C AVO1Q08236 1176 aa3.2□□□□□ -1.9
PRP8YHR165C ACE2P21192 770 aa3.2□□□□□ -1.9
PRP8YHR165C RRF1P38771 230 aa3.2□□□□□ -1.9
PRP8YHR165C PET100P38958 111 aa3.2□□□□□ -1.9
PRP8YHR165C MAK21Q12176 1025 aaKnown RBP3.2□□□□□ -1.9
PRP8YHR165C PRP45P28004 379 aaPredicted RBP3.2□□□□□ -1.9
PRP8YHR165C NOG1Q02892 647 aaKnown RBP3.2□□□□□ -1.9
PRP8YHR165C MSS116P15424 664 aaKnown RBP3.2□□□□□ -1.9
PRP8YHR165C YSH1Q06224 779 aaPredicted RBP3.2□□□□□ -1.9
PRP8YHR165C KAR3P17119 729 aa3.2□□□□□ -1.9
PRP8YHR165C IES5P40060 125 aa3.2□□□□□ -1.9
PRP8YHR165C SHE10P53075 577 aa3.2□□□□□ -1.9
PRP8YHR165C LSG1P53145 640 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
PRP8YHR165C YIL002W-AQ3E7Z5 69 aa3.19□□□□□ -1.9
PRP8YHR165C YNR021WP53723 404 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C BUD3P25558 1636 aa3.19□□□□□ -1.9
PRP8YHR165C BUD27P43573 796 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
PRP8YHR165C SKS1Q12505 502 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-HO13535 1793 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-DR5P0C2I2 1755 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-DR6P0C2I3 1755 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-LR2P0C2I5 1755 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-LR3P0C2I6 1755 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C TY1B-PR1P0C2I9 1755 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C TY1B-PR2P0C2J0 1756 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-PR3P0C2J1 1755 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C TY1B-JR1P47098 1755 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-ML2Q03434 1755 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C TY1B-ER1Q03612 1755 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-ML1Q04711 1755 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C TY1B-GR2Q12269 1755 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-OLQ12273 1755 aa3.19□□□□□ -1.9
PRP8YHR165C TY1B-PLQ12414 1755 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C PRP9P19736 530 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C EFB1P32471 206 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C BUD6P41697 788 aa3.19□□□□□ -1.9
PRP8YHR165C GCN20P43535 752 aaKnown RBP3.19□□□□□ -1.9
PRP8YHR165C RRP17Q04031 235 aaPredicted RBP3.19□□□□□ -1.9
PRP8YHR165C SNT1P25357 1226 aa3.18□□□□□ -1.9
PRP8YHR165C DEP1P31385 405 aa3.18□□□□□ -1.9
PRP8YHR165C CAJ1P39101 391 aa3.18□□□□□ -1.9
PRP8YHR165C SEC27P41811 889 aaKnown RBP3.18□□□□□ -1.9
PRP8YHR165C URN1Q06525 465 aaKnown RBP3.18□□□□□ -1.9
PRP8YHR165C AUS1Q08409 1394 aa3.18□□□□□ -1.9
PRP8YHR165C PDR11P40550 1411 aa3.18□□□□□ -1.9
PRP8YHR165C SEN54Q02825 467 aaPredicted RBP3.18□□□□□ -1.9
PRP8YHR165C HEM3P28789 327 aa3.18□□□□□ -1.9
PRP8YHR165C MRC1P25588 1096 aa3.18□□□□□ -1.9
PRP8YHR165C LTV1P34078 463 aa3.18□□□□□ -1.9
PRP8YHR165C DPB3P27344 201 aa3.17□□□□□ -1.9
PRP8YHR165C EIS1Q05050 843 aaKnown RBP3.17□□□□□ -1.9
PRP8YHR165C PPM2Q08282 695 aa3.17□□□□□ -1.9
PRP8YHR165C BCK1Q01389 1478 aa3.17□□□□□ -1.9
PRP8YHR165C TY2B-LR1P0C2J3 1770 aa3.17□□□□□ -1.9
PRP8YHR165C TY2B-FP0CX63 1770 aa3.17□□□□□ -1.9
PRP8YHR165C TY2B-GR2P0CX64 1770 aa3.17□□□□□ -1.9
PRP8YHR165C TY2B-CP25384 1770 aa3.17□□□□□ -1.9
PRP8YHR165C TY2B-DR2Q03494 1770 aa3.17□□□□□ -1.9
PRP8YHR165C TY1B-DR1Q03855 1755 aa3.17□□□□□ -1.9
PRP8YHR165C TY2B-DR3Q07791 1770 aaKnown RBP3.17□□□□□ -1.9
PRP8YHR165C TY2B-OR1Q12113 1770 aa3.17□□□□□ -1.9
PRP8YHR165C TY2B-DR1Q12472 1770 aa3.17□□□□□ -1.9
PRP8YHR165C TY2B-OR2Q12501 1770 aa3.17□□□□□ -1.9
PRP8YHR165C SSO1P32867 290 aa3.17□□□□□ -1.9
PRP8YHR165C BLI1P35727 113 aa3.17□□□□□ -1.9
PRP8YHR165C CCL1P37366 393 aa3.17□□□□□ -1.9
PRP8YHR165C NOP4P37838 685 aaKnown RBP3.17□□□□□ -1.9
PRP8YHR165C RGA1P39083 1007 aa3.17□□□□□ -1.9
PRP8YHR165C SVL3Q03088 825 aaKnown RBP3.17□□□□□ -1.9
PRP8YHR165C KRR1P25586 316 aaPredicted RBP3.17□□□□□ -1.9
PRP8YHR165C BEM3P32873 1128 aa3.17□□□□□ -1.9
PRP8YHR165C VPS24P36095 224 aaKnown RBP3.17□□□□□ -1.9
PRP8YHR165C NKP1Q12493 238 aa3.17□□□□□ -1.9
PRP8YHR165C KRE33P53914 1056 aaKnown RBP3.17□□□□□ -1.9
PRP8YHR165C ECM16Q04217 1267 aaKnown RBP3.17□□□□□ -1.9
PRP8YHR165C YKU80Q04437 629 aa3.17□□□□□ -1.9
PRP8YHR165C DNF2Q12675 1612 aa3.17□□□□□ -1.9
PRP8YHR165C ISW1P38144 1129 aa3.16□□□□□ -1.9
PRP8YHR165C RTG3P38165 486 aa3.16□□□□□ -1.9
PRP8YHR165C BDP1P46678 594 aa3.16□□□□□ -1.9
PRP8YHR165C AOS1Q06624 347 aa3.16□□□□□ -1.9
PRP8YHR165C MED2Q12124 431 aa3.16□□□□□ -1.9
PRP8YHR165C RPB2P08518 1224 aaKnown RBP3.16□□□□□ -1.9
PRP8YHR165C MGA2P40578 1113 aa3.16□□□□□ -1.9
PRP8YHR165C HYR1P40581 163 aaKnown RBP3.16□□□□□ -1.9
PRP8YHR165C RPN11P43588 306 aaKnown RBP3.16□□□□□ -1.9
PRP8YHR165C JJJ1P53863 590 aa3.16□□□□□ -1.9
PRP8YHR165C YKL050CP35736 922 aa3.16□□□□□ -1.9
PRP8YHR165C IES1P43579 692 aa3.16□□□□□ -1.9
PRP8YHR165C IRC4Q03036 179 aa3.16□□□□□ -1.9
PRP8YHR165C PKH1Q03407 766 aa3.16□□□□□ -1.9
PRP8YHR165C PUP2P32379 260 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms