RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W YKL133CP36066 463 aa19.1■□□□□ 0.65
RTC3YHR087W AKL1P38080 1108 aaKnown RBP19.08■□□□□ 0.64
RTC3YHR087W COBP00163 385 aa19.07■□□□□ 0.64
RTC3YHR087W YKR075CP36155 307 aa19.07■□□□□ 0.64
RTC3YHR087W HEF3P53978 1044 aaKnown RBP19.07■□□□□ 0.64
RTC3YHR087W TPD3P31383 635 aa19.05■□□□□ 0.64
RTC3YHR087W BUB1P41695 1021 aaKnown RBP RIP-Chip data19.04■□□□□ 0.64not detected
RTC3YHR087W YRF1-4O13559 1382 aa19.04■□□□□ 0.64
RTC3YHR087W APC1P53886 1748 aa19.03■□□□□ 0.64
RTC3YHR087W TFA1P36100 482 aa19.03■□□□□ 0.64
RTC3YHR087W SIR4P11978 1358 aa19.03■□□□□ 0.64
RTC3YHR087W DSD1P53095 428 aa19.02■□□□□ 0.64
RTC3YHR087W YIL177CP40434 1758 aa19.01■□□□□ 0.63
RTC3YHR087W YJL225CP40889 1758 aa19.01■□□□□ 0.63
RTC3YHR087W XKS1P42826 600 aa19■□□□□ 0.63
RTC3YHR087W YNL050CP53952 270 aa18.99■□□□□ 0.63
RTC3YHR087W RTT109Q07794 436 aa18.99■□□□□ 0.63
RTC3YHR087W CTF4Q01454 927 aa18.98■□□□□ 0.63
RTC3YHR087W FUN12P39730 1002 aaKnown RBP18.97■□□□□ 0.63
RTC3YHR087W RAD2P07276 1031 aa18.95■□□□□ 0.62
RTC3YHR087W FPR3P38911 411 aaKnown RBP18.95■□□□□ 0.62
RTC3YHR087W NTH2P35172 780 aa18.94■□□□□ 0.62
RTC3YHR087W BUD27P43573 796 aaKnown RBP RIP-Chip data18.93■□□□□ 0.62not detected
RTC3YHR087W MAM1P40065 302 aa18.92■□□□□ 0.62
RTC3YHR087W MAK21Q12176 1025 aaKnown RBP18.92■□□□□ 0.62
RTC3YHR087W YFR016CP43597 1233 aaKnown RBP18.91■□□□□ 0.62
RTC3YHR087W BDF1P35817 686 aa18.9■□□□□ 0.62
RTC3YHR087W YIL092WP40497 633 aa18.88■□□□□ 0.61
RTC3YHR087W GYP7P48365 746 aa18.88■□□□□ 0.61
RTC3YHR087W ZDS1P50111 915 aaKnown RBP18.88■□□□□ 0.61
RTC3YHR087W AOS1Q06624 347 aa18.88■□□□□ 0.61
RTC3YHR087W HSP104P31539 908 aaKnown RBP18.87■□□□□ 0.61
RTC3YHR087W ALD3P54114 506 aa18.84■□□□□ 0.61
RTC3YHR087W RRD1P40454 393 aaKnown RBP18.83■□□□□ 0.6
RTC3YHR087W RCR1P38212 213 aa18.82■□□□□ 0.6
RTC3YHR087W RPG1P38249 964 aaKnown RBP18.81■□□□□ 0.6
RTC3YHR087W RRT14P40470 206 aa18.8■□□□□ 0.6
RTC3YHR087W MEC3Q02574 474 aa18.8■□□□□ 0.6
RTC3YHR087W FRK1Q03002 865 aaPredicted RBP18.8■□□□□ 0.6
RTC3YHR087W DAL5P15365 543 aa18.79■□□□□ 0.6
RTC3YHR087W UGA3P26370 528 aa18.77■□□□□ 0.6
RTC3YHR087W MSB4Q12317 492 aa18.75■□□□□ 0.59
RTC3YHR087W NSE3Q05541 303 aa18.74■□□□□ 0.59
RTC3YHR087W SRT1Q03175 343 aa18.73■□□□□ 0.59
RTC3YHR087W KCC4P25389 1037 aa18.72■□□□□ 0.59
RTC3YHR087W ADE16P54113 591 aaKnown RBP18.72■□□□□ 0.59
RTC3YHR087W INP54Q08227 384 aaKnown RBP18.72■□□□□ 0.59
RTC3YHR087W BMS1Q08965 1183 aaKnown RBP18.72■□□□□ 0.59
RTC3YHR087W LYS2P07702 1392 aa18.71■□□□□ 0.59
RTC3YHR087W POL32P47110 350 aa18.71■□□□□ 0.59
RTC3YHR087W RIM15P43565 1770 aa18.7■□□□□ 0.58
RTC3YHR087W EAF6P47128 113 aa18.7■□□□□ 0.58
RTC3YHR087W NUP145P49687 1317 aa18.7■□□□□ 0.58
RTC3YHR087W COQ4O13525 335 aa18.67■□□□□ 0.58
RTC3YHR087W BUG1Q12191 341 aa18.66■□□□□ 0.58
RTC3YHR087W RPC31P17890 251 aa18.64■□□□□ 0.57
RTC3YHR087W TOS1P38288 455 aa18.64■□□□□ 0.57
RTC3YHR087W YPP1P46951 817 aa18.64■□□□□ 0.57
RTC3YHR087W YBR287WP38355 427 aa18.61■□□□□ 0.57
RTC3YHR087W PUF6Q04373 656 aaKnown RBP18.61■□□□□ 0.57
RTC3YHR087W YOL057WQ08225 711 aa18.61■□□□□ 0.57
RTC3YHR087W RAD4P14736 754 aa18.6■□□□□ 0.57
RTC3YHR087W UTP22P53254 1237 aaPredicted RBP18.6■□□□□ 0.57
RTC3YHR087W TRP5P00931 707 aaKnown RBP18.59■□□□□ 0.57
RTC3YHR087W OSM1P21375 501 aaKnown RBP18.59■□□□□ 0.57
RTC3YHR087W ATG13Q06628 738 aa18.59■□□□□ 0.57
RTC3YHR087W RPS19AP07280 144 aaKnown RBP18.58■□□□□ 0.56
RTC3YHR087W RPS19BP07281 144 aaPredicted RBP18.58■□□□□ 0.56
RTC3YHR087W GRE2Q12068 342 aaKnown RBP18.58■□□□□ 0.56
RTC3YHR087W MSN5P52918 1224 aa18.54■□□□□ 0.56
RTC3YHR087W CSI1Q04368 295 aa18.54■□□□□ 0.56
RTC3YHR087W CTT1P06115 562 aa18.53■□□□□ 0.56
RTC3YHR087W GRX1P25373 110 aaKnown RBP18.51■□□□□ 0.55
RTC3YHR087W YDR306CQ06640 478 aa18.5■□□□□ 0.55
RTC3YHR087W YNG2P38806 282 aaKnown RBP18.49■□□□□ 0.55
RTC3YHR087W HPC2Q01448 625 aa18.49■□□□□ 0.55
RTC3YHR087W ECM16Q04217 1267 aaKnown RBP18.49■□□□□ 0.55
RTC3YHR087W ALE1Q08548 619 aa18.49■□□□□ 0.55
RTC3YHR087W YER156CP40093 338 aaKnown RBP18.48■□□□□ 0.55
RTC3YHR087W NOP8Q08287 484 aaPredicted RBP18.48■□□□□ 0.55
RTC3YHR087W YBP2P53169 641 aa18.47■□□□□ 0.55
RTC3YHR087W DNM1P54861 757 aa18.47■□□□□ 0.55
RTC3YHR087W MRP7P12687 371 aa18.46■□□□□ 0.55
RTC3YHR087W RMT2Q03305 412 aa18.45■□□□□ 0.54
RTC3YHR087W YKL222CP35995 705 aa18.43■□□□□ 0.54
RTC3YHR087W YIR014WP40570 242 aa18.43■□□□□ 0.54
RTC3YHR087W YJR008WP47085 338 aa18.43■□□□□ 0.54
RTC3YHR087W HGH1P48362 394 aaKnown RBP18.43■□□□□ 0.54
RTC3YHR087W KIN4Q01919 800 aa18.43■□□□□ 0.54
RTC3YHR087W SSA4P22202 642 aaKnown RBP18.42■□□□□ 0.54
RTC3YHR087W RAD24P32641 659 aa18.42■□□□□ 0.54
RTC3YHR087W ERT1P38140 529 aa18.42■□□□□ 0.54
RTC3YHR087W SPO1P53541 631 aa18.42■□□□□ 0.54
RTC3YHR087W CST6P40535 587 aa18.41■□□□□ 0.54
RTC3YHR087W SQS1P53866 767 aaKnown RBP18.41■□□□□ 0.54
RTC3YHR087W RIX7Q07844 837 aaKnown RBP18.4■□□□□ 0.54
RTC3YHR087W GCD7P32502 381 aaPredicted RBP18.39■□□□□ 0.53
RTC3YHR087W ILV3P39522 585 aaKnown RBP18.39■□□□□ 0.53
RTC3YHR087W BOI2P39969 1040 aa18.39■□□□□ 0.53
RTC3YHR087W PEX21P50091 288 aa18.39■□□□□ 0.53
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms