RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C CDC4P07834 779 aa7.56□□□□□ -1.2
CUP1-2YHR055C ATG32P40458 529 aa7.56□□□□□ -1.2
CUP1-2YHR055C YPP1P46951 817 aa7.56□□□□□ -1.2
CUP1-2YHR055C STE20Q03497 939 aaKnown RBP7.56□□□□□ -1.2
CUP1-2YHR055C AIR1P40507 360 aaKnown RBP7.55□□□□□ -1.2
CUP1-2YHR055C TIF1P10081 395 aaKnown RBP7.54□□□□□ -1.2
CUP1-2YHR055C SUP45P12385 437 aaKnown RBP7.54□□□□□ -1.2
CUP1-2YHR055C TRK1P12685 1235 aa7.54□□□□□ -1.2
CUP1-2YHR055C MCM16Q12262 181 aa7.54□□□□□ -1.2
CUP1-2YHR055C ENO2P00925 437 aaKnown RBP7.52□□□□□ -1.21
CUP1-2YHR055C RTG2P32608 588 aaKnown RBP7.52□□□□□ -1.21
CUP1-2YHR055C MRX12P47084 519 aa7.52□□□□□ -1.21
CUP1-2YHR055C YPR084WQ06821 456 aa7.52□□□□□ -1.21
CUP1-2YHR055C FRA1Q07825 749 aa7.52□□□□□ -1.21
CUP1-2YHR055C EMP47P43555 445 aa7.51□□□□□ -1.21
CUP1-2YHR055C HST3P53687 447 aa7.51□□□□□ -1.21
CUP1-2YHR055C ISF1P32488 338 aa7.5□□□□□ -1.21
CUP1-2YHR055C MET32Q12041 191 aa7.5□□□□□ -1.21
CUP1-2YHR055C APP1P53933 587 aa7.49□□□□□ -1.21
CUP1-2YHR055C SRC1Q03707 834 aa7.49□□□□□ -1.21
CUP1-2YHR055C ITT1Q04638 464 aa7.49□□□□□ -1.21
CUP1-2YHR055C MRT4P33201 236 aaKnown RBP7.48□□□□□ -1.21
CUP1-2YHR055C ATG3P40344 310 aa7.48□□□□□ -1.21
CUP1-2YHR055C AFT1P22149 690 aa7.47□□□□□ -1.21
CUP1-2YHR055C ASH1P34233 588 aa7.47□□□□□ -1.21
CUP1-2YHR055C EMW1P42842 904 aaKnown RBP7.47□□□□□ -1.21
CUP1-2YHR055C RIM21P48565 533 aa7.47□□□□□ -1.21
CUP1-2YHR055C YPR204WQ08995 1032 aa7.47□□□□□ -1.21
CUP1-2YHR055C RLF2Q12495 606 aa7.47□□□□□ -1.21
CUP1-2YHR055C RTT106P40161 455 aa7.46□□□□□ -1.22
CUP1-2YHR055C ENV9Q08651 330 aa7.46□□□□□ -1.22
CUP1-2YHR055C UGA3P26370 528 aa7.45□□□□□ -1.22
CUP1-2YHR055C MKS1P34072 584 aa7.44□□□□□ -1.22
CUP1-2YHR055C GCR2Q01722 534 aa7.44□□□□□ -1.22
CUP1-2YHR055C ATG20Q07528 640 aa7.44□□□□□ -1.22
CUP1-2YHR055C ENO1P00924 437 aaKnown RBP7.43□□□□□ -1.22
CUP1-2YHR055C TAF7Q05021 590 aa7.43□□□□□ -1.22
CUP1-2YHR055C MSB3P48566 633 aaPredicted RBP7.42□□□□□ -1.22
CUP1-2YHR055C YBL086CP38177 466 aa7.41□□□□□ -1.22
CUP1-2YHR055C BRE2P43132 505 aa7.41□□□□□ -1.22
CUP1-2YHR055C MRX10Q05648 414 aa7.41□□□□□ -1.22
CUP1-2YHR055C FBP26P32604 452 aa7.4□□□□□ -1.22
CUP1-2YHR055C SIS2P36024 562 aa7.4□□□□□ -1.22
CUP1-2YHR055C SOH1P38633 127 aa7.4□□□□□ -1.22
CUP1-2YHR055C UTP13Q05946 817 aaKnown RBP7.4□□□□□ -1.22
CUP1-2YHR055C SRF1Q12516 437 aa7.4□□□□□ -1.22
CUP1-2YHR055C APL6P46682 809 aa7.39□□□□□ -1.23
CUP1-2YHR055C ISR1Q06098 443 aaKnown RBP7.39□□□□□ -1.23
CUP1-2YHR055C RPP2BP02400 110 aaKnown RBP7.38□□□□□ -1.23
CUP1-2YHR055C YJR115WP47152 169 aa7.37□□□□□ -1.23
CUP1-2YHR055C DFG5Q05031 458 aa7.37□□□□□ -1.23
CUP1-2YHR055C BDS1Q08347 646 aa7.37□□□□□ -1.23
CUP1-2YHR055C RDS2P19541 446 aaKnown RBP7.36□□□□□ -1.23
CUP1-2YHR055C ISU1Q03020 165 aa7.36□□□□□ -1.23
CUP1-2YHR055C ARG82P07250 355 aa7.35□□□□□ -1.23
CUP1-2YHR055C PTK2P47116 818 aaKnown RBP7.34□□□□□ -1.23
CUP1-2YHR055C STE6P12866 1290 aa7.33□□□□□ -1.24
CUP1-2YHR055C TTI1P36097 1038 aa7.33□□□□□ -1.24
CUP1-2YHR055C UTR2P32623 467 aa7.32□□□□□ -1.24
CUP1-2YHR055C HAL5P38970 855 aaKnown RBP7.32□□□□□ -1.24
CUP1-2YHR055C DAT1P13483 248 aaKnown RBP7.31□□□□□ -1.24
CUP1-2YHR055C SSA4P22202 642 aaKnown RBP7.31□□□□□ -1.24
CUP1-2YHR055C CPS1P27614 576 aa7.31□□□□□ -1.24
CUP1-2YHR055C PEP12P32854 288 aa7.31□□□□□ -1.24
CUP1-2YHR055C TBS1P38114 1094 aa7.31□□□□□ -1.24
CUP1-2YHR055C DLD3P39976 496 aaKnown RBP7.31□□□□□ -1.24
CUP1-2YHR055C KTR7P40504 517 aa7.31□□□□□ -1.24
CUP1-2YHR055C AAD14P42884 376 aa7.31□□□□□ -1.24
CUP1-2YHR055C MIP1P15801 1254 aa7.3□□□□□ -1.24
CUP1-2YHR055C SPT2P06843 333 aaPredicted RBP7.29□□□□□ -1.24
CUP1-2YHR055C YFL034WP43564 1073 aa7.29□□□□□ -1.24
CUP1-2YHR055C HDA3Q06623 655 aa7.29□□□□□ -1.24
CUP1-2YHR055C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
CUP1-2YHR055C NUP85P46673 744 aa7.28□□□□□ -1.24
CUP1-2YHR055C YLR346CQ06139 101 aa7.27□□□□□ -1.25
CUP1-2YHR055C TGL4P36165 910 aa7.26□□□□□ -1.25
CUP1-2YHR055C AIM9P40053 627 aaKnown RBP7.26□□□□□ -1.25
CUP1-2YHR055C LSC2P53312 427 aa7.26□□□□□ -1.25
CUP1-2YHR055C WTM2Q12206 467 aa7.26□□□□□ -1.25
CUP1-2YHR055C TSC13Q99190 310 aa7.25□□□□□ -1.25
CUP1-2YHR055C HAP4P14064 554 aa7.24□□□□□ -1.25
CUP1-2YHR055C PDI1P17967 522 aaKnown RBP7.24□□□□□ -1.25
CUP1-2YHR055C PHO87P25360 923 aa7.24□□□□□ -1.25
CUP1-2YHR055C GAL2P13181 574 aa7.23□□□□□ -1.25
CUP1-2YHR055C DLD1P32891 587 aa7.23□□□□□ -1.25
CUP1-2YHR055C SLX8P40072 274 aa7.22□□□□□ -1.25
CUP1-2YHR055C ECM23Q02710 187 aa7.22□□□□□ -1.25
CUP1-2YHR055C MET22P32179 357 aa7.21□□□□□ -1.26
CUP1-2YHR055C NTH2P35172 780 aa7.21□□□□□ -1.26
CUP1-2YHR055C YDR444WQ04093 687 aa7.21□□□□□ -1.26
CUP1-2YHR055C UTP7P40055 554 aaKnown RBP7.2□□□□□ -1.26
CUP1-2YHR055C YJR098CP47139 656 aa7.2□□□□□ -1.26
CUP1-2YHR055C ACS2P52910 683 aaKnown RBP7.2□□□□□ -1.26
CUP1-2YHR055C UBP2Q01476 1272 aa7.2□□□□□ -1.26
CUP1-2YHR055C OPT2Q06593 877 aa7.2□□□□□ -1.26
CUP1-2YHR055C GAS4Q08271 471 aa7.2□□□□□ -1.26
CUP1-2YHR055C SWI5P08153 709 aa7.19□□□□□ -1.26
CUP1-2YHR055C RPS6AP0CX37 236 aaKnown RBP7.19□□□□□ -1.26
CUP1-2YHR055C RPS6BP0CX38 236 aaPredicted RBP7.19□□□□□ -1.26
CUP1-2YHR055C PUP1P25043 261 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms