RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	SNU71	P53207	620 aa	Known RBP	3.43	□□□□□ -1.86
YDR239C	YDR239C	TOP1	P04786	769 aa		3.42	□□□□□ -1.86
YDR239C	YDR239C	PSE1	P32337	1089 aa	Known RBP	3.42	□□□□□ -1.86
YDR239C	YDR239C	YPR148C	Q06523	435 aa		3.41	□□□□□ -1.86
YDR239C	YDR239C	ALR1	Q08269	859 aa		3.41	□□□□□ -1.86
YDR239C	YDR239C	PDC1	P06169	563 aa	Known RBP	3.41	□□□□□ -1.86
YDR239C	YDR239C	TBF1	Q02457	562 aa		3.41	□□□□□ -1.86
YDR239C	YDR239C	MRT4	P33201	236 aa	Known RBP	3.4	□□□□□ -1.86
YDR239C	YDR239C	ROG3	P43602	733 aa		3.4	□□□□□ -1.86
YDR239C	YDR239C	MDJ1	P35191	511 aa		3.4	□□□□□ -1.87
YDR239C	YDR239C	THI72	Q08579	599 aa		3.4	□□□□□ -1.87
YDR239C	YDR239C	TCB1	Q12466	1186 aa		3.39	□□□□□ -1.87
YDR239C	YDR239C	AAD14	P42884	376 aa		3.39	□□□□□ -1.87
YDR239C	YDR239C	AI1	P03875	834 aa		3.38	□□□□□ -1.87
YDR239C	YDR239C	TY1A-MR1	Q04215	440 aa		3.38	□□□□□ -1.87
YDR239C	YDR239C	OSH7	P38755	437 aa		3.38	□□□□□ -1.87
YDR239C	YDR239C	YJR098C	P47139	656 aa		3.37	□□□□□ -1.87
YDR239C	YDR239C	CCT8	P47079	568 aa	Known RBP	3.37	□□□□□ -1.87
YDR239C	YDR239C	RPA14	P50106	137 aa		3.37	□□□□□ -1.87
YDR239C	YDR239C	SLY41	P22215	453 aa		3.36	□□□□□ -1.87
YDR239C	YDR239C	ORC1	P54784	914 aa	Predicted RBP	3.36	□□□□□ -1.87
YDR239C	YDR239C	DLD1	P32891	587 aa		3.36	□□□□□ -1.87
YDR239C	YDR239C	CWC22	P53333	577 aa	Known RBP	3.36	□□□□□ -1.87
YDR239C	YDR239C	JJJ3	P47138	172 aa		3.35	□□□□□ -1.87
YDR239C	YDR239C	TEA1	P47988	759 aa		3.35	□□□□□ -1.87
YDR239C	YDR239C	MDG1	P53885	366 aa		3.35	□□□□□ -1.87
YDR239C	YDR239C	YMR196W	Q04336	1088 aa		3.35	□□□□□ -1.87
YDR239C	YDR239C	SIT4	P20604	311 aa		3.34	□□□□□ -1.87
YDR239C	YDR239C	PUS6	P53294	404 aa		3.34	□□□□□ -1.87
YDR239C	YDR239C	YPR097W	Q06839	1073 aa		3.34	□□□□□ -1.87
YDR239C	YDR239C	YPR053C	Q6Q5F3	151 aa		3.34	□□□□□ -1.87
YDR239C	YDR239C	DEF1	P35732	738 aa	Known RBP	3.33	□□□□□ -1.88
YDR239C	YDR239C	YDL206W	Q12424	762 aa		3.33	□□□□□ -1.88
YDR239C	YDR239C	LEU3	P08638	886 aa		3.33	□□□□□ -1.88
YDR239C	YDR239C	INO80	P53115	1489 aa		3.32	□□□□□ -1.88
YDR239C	YDR239C	MON2	P48563	1636 aa	Predicted RBP	3.31	□□□□□ -1.88
YDR239C	YDR239C	BRL1	P38770	471 aa		3.31	□□□□□ -1.88
YDR239C	YDR239C	YBL086C	P38177	466 aa		3.3	□□□□□ -1.88
YDR239C	YDR239C	PBS2	P08018	668 aa		3.3	□□□□□ -1.88
YDR239C	YDR239C	CEM1	P39525	442 aa		3.3	□□□□□ -1.88
YDR239C	YDR239C	CKB1	P43639	278 aa		3.3	□□□□□ -1.88
YDR239C	YDR239C	DMA2	P53924	522 aa		3.3	□□□□□ -1.88
YDR239C	YDR239C	CCP1	P00431	361 aa		3.29	□□□□□ -1.88
YDR239C	YDR239C	NIS1	P53939	407 aa		3.29	□□□□□ -1.88
YDR239C	YDR239C	PSH1	Q12161	406 aa		3.29	□□□□□ -1.88
YDR239C	YDR239C	GIN4	Q12263	1142 aa		3.29	□□□□□ -1.88
YDR239C	YDR239C	MAM3	Q12296	706 aa		3.29	□□□□□ -1.88
YDR239C	YDR239C	SPB4	P25808	606 aa	Predicted RBP	3.28	□□□□□ -1.88
YDR239C	YDR239C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.28	□□□□□ -1.88	not detected
YDR239C	YDR239C	YMR187C	Q03236	431 aa		3.28	□□□□□ -1.88
YDR239C	YDR239C	RLP24	Q07915	199 aa	Known RBP	3.28	□□□□□ -1.88
YDR239C	YDR239C	HIF1	Q12373	385 aa		3.28	□□□□□ -1.88
YDR239C	YDR239C	ADE12	P80210	433 aa	Known RBP	3.27	□□□□□ -1.89
YDR239C	YDR239C	PLP2	Q12017	286 aa		3.27	□□□□□ -1.89
YDR239C	YDR239C	SUB1	P54000	292 aa	Known RBP	3.27	□□□□□ -1.89
YDR239C	YDR239C	YFL066C	P43538	392 aa		3.26	□□□□□ -1.89
YDR239C	YDR239C	VPS72	Q03388	795 aa		3.26	□□□□□ -1.89
YDR239C	YDR239C	SWE1	P32944	819 aa		3.26	□□□□□ -1.89
YDR239C	YDR239C	FPR3	P38911	411 aa	Known RBP	3.26	□□□□□ -1.89
YDR239C	YDR239C	NUG1	P40010	520 aa	Known RBP	3.26	□□□□□ -1.89
YDR239C	YDR239C	ENV11	P53246	860 aa		3.26	□□□□□ -1.89
YDR239C	YDR239C	FPK1	P53739	893 aa		3.26	□□□□□ -1.89
YDR239C	YDR239C	APP1	P53933	587 aa		3.26	□□□□□ -1.89
YDR239C	YDR239C	HSP82	P02829	709 aa	Known RBP	3.25	□□□□□ -1.89
YDR239C	YDR239C	TRM1	P15565	570 aa	Known RBP	3.25	□□□□□ -1.89
YDR239C	YDR239C	TOA1	P32773	286 aa		3.25	□□□□□ -1.89
YDR239C	YDR239C	RPN1	P38764	993 aa	Known RBP	3.25	□□□□□ -1.89
YDR239C	YDR239C	RLF2	Q12495	606 aa		3.25	□□□□□ -1.89
YDR239C	YDR239C	VAC17	P25591	423 aa		3.25	□□□□□ -1.89
YDR239C	YDR239C	MKS1	P34072	584 aa		3.25	□□□□□ -1.89
YDR239C	YDR239C	CDC19	P00549	500 aa	Known RBP	3.24	□□□□□ -1.89
YDR239C	YDR239C	RPS0A	P32905	252 aa	Known RBP	3.24	□□□□□ -1.89
YDR239C	YDR239C	DSF2	P38213	736 aa		3.24	□□□□□ -1.89
YDR239C	YDR239C	BDS1	Q08347	646 aa		3.24	□□□□□ -1.89
YDR239C	YDR239C	MAC1	P35192	417 aa		3.24	□□□□□ -1.89
YDR239C	YDR239C	DFG5	Q05031	458 aa		3.24	□□□□□ -1.89
YDR239C	YDR239C	YNR014W	P53719	212 aa		3.23	□□□□□ -1.89
YDR239C	YDR239C	CUZ1	P53899	274 aa		3.23	□□□□□ -1.89
YDR239C	YDR239C	YMR265C	Q03508	461 aa	Known RBP	3.23	□□□□□ -1.89
YDR239C	YDR239C	ASF1	P32447	279 aa		3.23	□□□□□ -1.89
YDR239C	YDR239C	SKN7	P38889	622 aa		3.23	□□□□□ -1.89
YDR239C	YDR239C	EMW1	P42842	904 aa	Known RBP	3.23	□□□□□ -1.89
YDR239C	YDR239C	TCB2	P48231	1178 aa		3.23	□□□□□ -1.89
YDR239C	YDR239C	NAM8	Q00539	523 aa	Known RBP	3.23	□□□□□ -1.89
YDR239C	YDR239C	TDA6	Q06466	467 aa		3.23	□□□□□ -1.89
YDR239C	YDR239C	NHA1	Q99271	985 aa		3.23	□□□□□ -1.89
YDR239C	YDR239C	TLG1	Q03322	224 aa		3.22	□□□□□ -1.89
YDR239C	YDR239C	SPT2	P06843	333 aa	Predicted RBP	3.22	□□□□□ -1.89
YDR239C	YDR239C	IES2	P40154	320 aa		3.22	□□□□□ -1.89
YDR239C	YDR239C	ENP1	P38333	483 aa	Known RBP	3.21	□□□□□ -1.9
YDR239C	YDR239C	MMP1	Q12372	583 aa		3.21	□□□□□ -1.9
YDR239C	YDR239C	BRN1	P38170	754 aa		3.2	□□□□□ -1.9
YDR239C	YDR239C	RTS3	P53289	263 aa		3.2	□□□□□ -1.9
YDR239C	YDR239C	RPP2B	P02400	110 aa	Known RBP	3.2	□□□□□ -1.9
YDR239C	YDR239C	IRC24	P40580	263 aa		3.2	□□□□□ -1.9
YDR239C	YDR239C	MPP10	P47083	593 aa	Known RBP	3.2	□□□□□ -1.9
YDR239C	YDR239C	SPT7	P35177	1332 aa		3.2	□□□□□ -1.9
YDR239C	YDR239C	SSA1	P10591	642 aa	Known RBP	3.19	□□□□□ -1.9
YDR239C	YDR239C	SSA2	P10592	639 aa	Known RBP	3.19	□□□□□ -1.9
YDR239C	YDR239C	SBE2	P42223	864 aa	Known RBP	3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms