RNA–Protein interactions for RNA: YDR066C

RTR2, Transcript of Protein of unknown function, yeast

Gene RTR2, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTR2	YDR066C	ISF1	P32488	338 aa		5.34	□□□□□ -1.55
RTR2	YDR066C	NAF1	P53919	492 aa	Known RBP	5.34	□□□□□ -1.55
RTR2	YDR066C	MCM16	Q12262	181 aa		5.34	□□□□□ -1.55
RTR2	YDR066C	SUP45	P12385	437 aa	Known RBP	5.33	□□□□□ -1.56
RTR2	YDR066C	RGA1	P39083	1007 aa		5.33	□□□□□ -1.56
RTR2	YDR066C	SPT5	P27692	1063 aa	Known RBP	5.32	□□□□□ -1.56
RTR2	YDR066C	IXR1	P33417	597 aa		5.32	□□□□□ -1.56
RTR2	YDR066C	SYH1	Q02875	849 aa	Known RBP	5.32	□□□□□ -1.56
RTR2	YDR066C	CDC4	P07834	779 aa		5.31	□□□□□ -1.56
RTR2	YDR066C	TIF1	P10081	395 aa	Known RBP	5.31	□□□□□ -1.56
RTR2	YDR066C	KIP2	P28743	706 aa		5.31	□□□□□ -1.56
RTR2	YDR066C	TRK1	P12685	1235 aa		5.3	□□□□□ -1.56
RTR2	YDR066C	RDS2	P19541	446 aa	Known RBP	5.3	□□□□□ -1.56
RTR2	YDR066C	RIM21	P48565	533 aa		5.3	□□□□□ -1.56
RTR2	YDR066C	APP1	P53933	587 aa		5.3	□□□□□ -1.56
RTR2	YDR066C	FRA1	Q07825	749 aa		5.3	□□□□□ -1.56
RTR2	YDR066C	MRT4	P33201	236 aa	Known RBP	5.29	□□□□□ -1.56
RTR2	YDR066C	EMP47	P43555	445 aa		5.29	□□□□□ -1.56
RTR2	YDR066C	APL6	P46682	809 aa		5.29	□□□□□ -1.56
RTR2	YDR066C	GUT2	P32191	649 aa		5.28	□□□□□ -1.56
RTR2	YDR066C	ENO1	P00924	437 aa	Known RBP	5.27	□□□□□ -1.57
RTR2	YDR066C	EMW1	P42842	904 aa	Known RBP	5.27	□□□□□ -1.57
RTR2	YDR066C	HGH1	P48362	394 aa	Known RBP	5.27	□□□□□ -1.57
RTR2	YDR066C	MRX10	Q05648	414 aa		5.27	□□□□□ -1.57
RTR2	YDR066C	ASH1	P34233	588 aa		5.26	□□□□□ -1.57
RTR2	YDR066C	YPR204W	Q08995	1032 aa		5.26	□□□□□ -1.57
RTR2	YDR066C	AFT1	P22149	690 aa		5.25	□□□□□ -1.57
RTR2	YDR066C	HAL5	P38970	855 aa	Known RBP	5.25	□□□□□ -1.57
RTR2	YDR066C	STE20	Q03497	939 aa	Known RBP	5.25	□□□□□ -1.57
RTR2	YDR066C	RTG2	P32608	588 aa	Known RBP	5.24	□□□□□ -1.57
RTR2	YDR066C	YBL086C	P38177	466 aa		5.24	□□□□□ -1.57
RTR2	YDR066C	RPL34B	P40525	121 aa	Known RBP	5.22	□□□□□ -1.57
RTR2	YDR066C	MKS1	P34072	584 aa		5.21	□□□□□ -1.58
RTR2	YDR066C	SOH1	P38633	127 aa		5.21	□□□□□ -1.58
RTR2	YDR066C	BRE2	P43132	505 aa		5.21	□□□□□ -1.58
RTR2	YDR066C	YJR115W	P47152	169 aa		5.21	□□□□□ -1.58
RTR2	YDR066C	MSB3	P48566	633 aa	Predicted RBP	5.21	□□□□□ -1.58
RTR2	YDR066C	DFG5	Q05031	458 aa		5.21	□□□□□ -1.58
RTR2	YDR066C	PEP12	P32854	288 aa		5.2	□□□□□ -1.58
RTR2	YDR066C	YPP1	P46951	817 aa		5.2	□□□□□ -1.58
RTR2	YDR066C	MRX12	P47084	519 aa		5.2	□□□□□ -1.58
RTR2	YDR066C	HST3	P53687	447 aa		5.2	□□□□□ -1.58
RTR2	YDR066C	ISR1	Q06098	443 aa	Known RBP	5.2	□□□□□ -1.58
RTR2	YDR066C	ATG20	Q07528	640 aa		5.2	□□□□□ -1.58
RTR2	YDR066C	FBP26	P32604	452 aa		5.19	□□□□□ -1.58
RTR2	YDR066C	TTI1	P36097	1038 aa		5.19	□□□□□ -1.58
RTR2	YDR066C	UGA3	P26370	528 aa		5.17	□□□□□ -1.58
RTR2	YDR066C	PTK2	P47116	818 aa	Known RBP	5.17	□□□□□ -1.58
RTR2	YDR066C	STE6	P12866	1290 aa		5.16	□□□□□ -1.58
RTR2	YDR066C	CPS1	P27614	576 aa		5.16	□□□□□ -1.58
RTR2	YDR066C	AAD14	P42884	376 aa		5.16	□□□□□ -1.58
RTR2	YDR066C	ISU1	Q03020	165 aa		5.16	□□□□□ -1.58
RTR2	YDR066C	KTR7	P40504	517 aa		5.15	□□□□□ -1.59
RTR2	YDR066C	RLF2	Q12495	606 aa		5.15	□□□□□ -1.59
RTR2	YDR066C	MIP1	P15801	1254 aa		5.14	□□□□□ -1.59
RTR2	YDR066C	UTP13	Q05946	817 aa	Known RBP	5.14	□□□□□ -1.59
RTR2	YDR066C	ENV9	Q08651	330 aa		5.14	□□□□□ -1.59
RTR2	YDR066C	SPT2	P06843	333 aa	Predicted RBP	5.13	□□□□□ -1.59
RTR2	YDR066C	DLD1	P32891	587 aa		5.13	□□□□□ -1.59
RTR2	YDR066C	HDA3	Q06623	655 aa		5.13	□□□□□ -1.59
RTR2	YDR066C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
RTR2	YDR066C	UTR2	P32623	467 aa		5.12	□□□□□ -1.59
RTR2	YDR066C	BDS1	Q08347	646 aa		5.12	□□□□□ -1.59
RTR2	YDR066C	WTM2	Q12206	467 aa		5.12	□□□□□ -1.59
RTR2	YDR066C	PUP1	P25043	261 aa		5.11	□□□□□ -1.59
RTR2	YDR066C	MET22	P32179	357 aa		5.11	□□□□□ -1.59
RTR2	YDR066C	TGL4	P36165	910 aa		5.11	□□□□□ -1.59
RTR2	YDR066C	SLX8	P40072	274 aa		5.11	□□□□□ -1.59
RTR2	YDR066C	ATG3	P40344	310 aa		5.11	□□□□□ -1.59
RTR2	YDR066C	YML083C	Q04526	418 aa		5.11	□□□□□ -1.59
RTR2	YDR066C	TAF7	Q05021	590 aa		5.1	□□□□□ -1.59
RTR2	YDR066C	ARG82	P07250	355 aa		5.09	□□□□□ -1.59
RTR2	YDR066C	PDI1	P17967	522 aa	Known RBP	5.09	□□□□□ -1.59
RTR2	YDR066C	AIM9	P40053	627 aa	Known RBP	5.09	□□□□□ -1.59
RTR2	YDR066C	RTT106	P40161	455 aa		5.09	□□□□□ -1.59
RTR2	YDR066C	YJR098C	P47139	656 aa		5.09	□□□□□ -1.59
RTR2	YDR066C	ACS2	P52910	683 aa	Known RBP	5.09	□□□□□ -1.59
RTR2	YDR066C	GCR2	Q01722	534 aa		5.09	□□□□□ -1.59
RTR2	YDR066C	NOB1	Q08444	459 aa	Known RBP	5.09	□□□□□ -1.59
RTR2	YDR066C	UTP7	P40055	554 aa	Known RBP	5.08	□□□□□ -1.6
RTR2	YDR066C	NUP85	P46673	744 aa		5.08	□□□□□ -1.6
RTR2	YDR066C	YPL062W	Q02781	134 aa		5.08	□□□□□ -1.6
RTR2	YDR066C	OPT2	Q06593	877 aa		5.08	□□□□□ -1.6
RTR2	YDR066C	SRF1	Q12516	437 aa		5.08	□□□□□ -1.6
RTR2	YDR066C	SWI5	P08153	709 aa		5.07	□□□□□ -1.6
RTR2	YDR066C	GAL2	P13181	574 aa		5.07	□□□□□ -1.6
RTR2	YDR066C	DAT1	P13483	248 aa	Known RBP	5.07	□□□□□ -1.6
RTR2	YDR066C	GAR1	P28007	205 aa	Known RBP	5.07	□□□□□ -1.6
RTR2	YDR066C	SIS2	P36024	562 aa		5.07	□□□□□ -1.6
RTR2	YDR066C	ROM1	P53046	1155 aa		5.07	□□□□□ -1.6
RTR2	YDR066C	ECM23	Q02710	187 aa		5.07	□□□□□ -1.6
RTR2	YDR066C	LCB5	Q06147	687 aa	Known RBP	5.07	□□□□□ -1.6
RTR2	YDR066C	SUB2	Q07478	446 aa	Known RBP	5.07	□□□□□ -1.6
RTR2	YDR066C	PHO87	P25360	923 aa		5.06	□□□□□ -1.6
RTR2	YDR066C	YDR444W	Q04093	687 aa		5.06	□□□□□ -1.6
RTR2	YDR066C	TY1A-DR3	Q12441	440 aa		5.06	□□□□□ -1.6
RTR2	YDR066C	RPS6A	P0CX37	236 aa	Known RBP	5.05	□□□□□ -1.6
RTR2	YDR066C	RPS6B	P0CX38	236 aa	Predicted RBP	5.05	□□□□□ -1.6
RTR2	YDR066C	SSN3	P39073	555 aa		5.05	□□□□□ -1.6
RTR2	YDR066C	YPQ2	Q06328	317 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms