RNA–Protein interactions for RNA: YBR125C

PTC4, Transcript of Cytoplasmic type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC4, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC4YBR125C RGR1P19263 1082 aa9.41□□□□□ -0.9
PTC4YBR125C DIT2P21595 489 aa9.41□□□□□ -0.9
PTC4YBR125C NUP42P49686 430 aaKnown RBP9.41□□□□□ -0.9
PTC4YBR125C YML082WQ04533 649 aaKnown RBP9.41□□□□□ -0.9
PTC4YBR125C DOP1Q03921 1698 aa9.4□□□□□ -0.9
PTC4YBR125C YPR109WQ06104 294 aa9.4□□□□□ -0.9
PTC4YBR125C YPR015CQ12531 247 aa9.38□□□□□ -0.91
PTC4YBR125C SSM4P40318 1319 aa9.37□□□□□ -0.91
PTC4YBR125C RAM1P22007 431 aa9.37□□□□□ -0.91
PTC4YBR125C PSE1P32337 1089 aaKnown RBP9.37□□□□□ -0.91
PTC4YBR125C YSP2Q06681 1438 aa9.37□□□□□ -0.91
PTC4YBR125C SEC7P11075 2009 aaKnown RBP9.34□□□□□ -0.91
PTC4YBR125C MMS1Q06211 1407 aa9.34□□□□□ -0.91
PTC4YBR125C CHC1P22137 1653 aaKnown RBP9.33□□□□□ -0.92
PTC4YBR125C SRB8P25648 1427 aa9.33□□□□□ -0.92
PTC4YBR125C TRM3Q07527 1436 aa9.32□□□□□ -0.92
PTC4YBR125C NUD1P32336 851 aa9.31□□□□□ -0.92
PTC4YBR125C XDJ1P39102 459 aa9.31□□□□□ -0.92
PTC4YBR125C NPL4P33755 580 aa9.29□□□□□ -0.92
PTC4YBR125C DNF2Q12675 1612 aa9.28□□□□□ -0.92
PTC4YBR125C ISM1P48526 1002 aa9.28□□□□□ -0.92
PTC4YBR125C STR2P47164 639 aa9.27□□□□□ -0.93
PTC4YBR125C GYP1Q08484 637 aa9.27□□□□□ -0.93
PTC4YBR125C BNR1P40450 1375 aa9.26□□□□□ -0.93
PTC4YBR125C TEA1P47988 759 aa9.26□□□□□ -0.93
PTC4YBR125C BUD20Q08004 166 aaPredicted RBP9.26□□□□□ -0.93
PTC4YBR125C GLC3P32775 704 aa9.25□□□□□ -0.93
PTC4YBR125C ATF2P53296 535 aa9.24□□□□□ -0.93
PTC4YBR125C CLB5P30283 435 aa9.23□□□□□ -0.93
PTC4YBR125C GCD11P32481 527 aaKnown RBP9.23□□□□□ -0.93
PTC4YBR125C YNR021WP53723 404 aaKnown RBP9.23□□□□□ -0.93
PTC4YBR125C BUD21Q08492 214 aaPredicted RBP9.21□□□□□ -0.94
PTC4YBR125C PRT1P06103 763 aaKnown RBP9.2□□□□□ -0.94
PTC4YBR125C LEU3P08638 886 aa9.19□□□□□ -0.94
PTC4YBR125C KEX2P13134 814 aa9.18□□□□□ -0.94
PTC4YBR125C YOR093CQ12275 1648 aa9.17□□□□□ -0.94
PTC4YBR125C ERF2Q06551 359 aa9.17□□□□□ -0.94
PTC4YBR125C GCN2P15442 1659 aa9.16□□□□□ -0.94
PTC4YBR125C NIS1P53939 407 aa9.16□□□□□ -0.94
PTC4YBR125C TY1A-DR4O74302 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-HP0C2I4 478 aaKnown RBP9.15□□□□□ -0.94
PTC4YBR125C TY1A-AP0CX57 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-PR1P0CX58 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-ORP0CX59 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-PR2P0CX60 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-DR5P0CX65 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-ER2P0CX66 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-GR3P0CX67 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-LR1P0CX68 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-MR2P0CX69 440 aa9.15□□□□□ -0.94
PTC4YBR125C SEC2P17065 759 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-JR2P47099 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-DR1Q03856 440 aa9.15□□□□□ -0.94
PTC4YBR125C SAS4Q04003 481 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-ML1Q04706 440 aaKnown RBP9.15□□□□□ -0.94
PTC4YBR125C TY1A-BRQ12217 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-NL2Q12470 440 aa9.15□□□□□ -0.94
PTC4YBR125C TY1A-GR2Q12485 440 aa9.15□□□□□ -0.94
PTC4YBR125C VMR1P38735 1592 aa9.14□□□□□ -0.95
PTC4YBR125C YMR196WQ04336 1088 aa9.12□□□□□ -0.95
PTC4YBR125C NUP188P52593 1655 aaKnown RBP9.12□□□□□ -0.95
PTC4YBR125C DPS1P04802 557 aaKnown RBP9.11□□□□□ -0.95
PTC4YBR125C FPK1P53739 893 aa9.1□□□□□ -0.95
PTC4YBR125C AIM7Q12156 149 aa9.09□□□□□ -0.95
PTC4YBR125C SIT4P20604 311 aa9.08□□□□□ -0.96
PTC4YBR125C SPT16P32558 1035 aaKnown RBP9.08□□□□□ -0.96
PTC4YBR125C RRN7P40992 514 aa9.08□□□□□ -0.96
PTC4YBR125C YNL115CP53925 644 aa9.08□□□□□ -0.96
PTC4YBR125C PDR5P33302 1511 aaKnown RBP9.08□□□□□ -0.96
PTC4YBR125C SDH2P21801 266 aa9.07□□□□□ -0.96
PTC4YBR125C SCJ1P25303 377 aa9.06□□□□□ -0.96
PTC4YBR125C MRF1P30775 413 aaPredicted RBP9.06□□□□□ -0.96
PTC4YBR125C RPN1P38764 993 aaKnown RBP9.06□□□□□ -0.96
PTC4YBR125C DNF3Q12674 1656 aa9.06□□□□□ -0.96
PTC4YBR125C IML1P47170 1584 aa9.05□□□□□ -0.96
PTC4YBR125C RAS1P01119 309 aa9.04□□□□□ -0.96
PTC4YBR125C SLY41P22215 453 aa9.04□□□□□ -0.96
PTC4YBR125C RTF1P53064 558 aa9.04□□□□□ -0.96
PTC4YBR125C PDR11P40550 1411 aa9.04□□□□□ -0.96
PTC4YBR125C PAT1P25644 796 aaKnown RBP9.03□□□□□ -0.96
PTC4YBR125C ERG12P07277 443 aa9.02□□□□□ -0.97
PTC4YBR125C KIN1P13185 1064 aa9.02□□□□□ -0.97
PTC4YBR125C YAP3P38749 330 aa9.02□□□□□ -0.97
PTC4YBR125C TYW1Q08960 810 aaKnown RBP9.02□□□□□ -0.97
PTC4YBR125C TUB4P53378 473 aa9.01□□□□□ -0.97
PTC4YBR125C TYS1P36421 394 aaKnown RBP9□□□□□ -0.97
PTC4YBR125C MMP1Q12372 583 aa9□□□□□ -0.97
PTC4YBR125C YEL077CQ3E7X8 1277 aa9□□□□□ -0.97
PTC4YBR125C AMS1P22855 1083 aa8.99□□□□□ -0.97
PTC4YBR125C GLN1P32288 370 aaKnown RBP8.99□□□□□ -0.97
PTC4YBR125C IPL1P38991 367 aa8.99□□□□□ -0.97
PTC4YBR125C PAC1P39946 494 aaKnown RBP8.99□□□□□ -0.97
PTC4YBR125C HST2P53686 357 aa8.99□□□□□ -0.97
PTC4YBR125C AGE1Q04412 482 aa8.98□□□□□ -0.97
PTC4YBR125C URN1Q06525 465 aaKnown RBP8.98□□□□□ -0.97
PTC4YBR125C ESS1P22696 170 aa8.97□□□□□ -0.97
PTC4YBR125C CSN12P47130 423 aa8.96□□□□□ -0.98
PTC4YBR125C KTR1P27810 393 aaKnown RBP8.93□□□□□ -0.98
PTC4YBR125C CST6P40535 587 aa8.93□□□□□ -0.98
PTC4YBR125C FRK1Q03002 865 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms