RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W USO1P25386 1790 aa8.96□□□□□ -0.97
SWD1YAR003W TY3B-IQ7LHG5 1498 aaKnown RBP8.96□□□□□ -0.97
SWD1YAR003W SPE2P21182 396 aa8.95□□□□□ -0.98
SWD1YAR003W YPR148CQ06523 435 aa8.94□□□□□ -0.98
SWD1YAR003W THI12P42883 340 aa8.93□□□□□ -0.98
SWD1YAR003W THI5P43534 340 aa8.93□□□□□ -0.98
SWD1YAR003W THI11P47183 340 aa8.93□□□□□ -0.98
SWD1YAR003W YNR029CP53729 429 aaKnown RBP8.93□□□□□ -0.98
SWD1YAR003W THI13Q07748 340 aa8.93□□□□□ -0.98
SWD1YAR003W YLR419WQ06698 1435 aaKnown RBP8.92□□□□□ -0.98
SWD1YAR003W ILV3P39522 585 aaKnown RBP8.92□□□□□ -0.98
SWD1YAR003W MHP1P43638 1398 aa8.89□□□□□ -0.99
SWD1YAR003W MID1P41821 548 aa8.89□□□□□ -0.99
SWD1YAR003W KEX1P09620 729 aa8.87□□□□□ -0.99
SWD1YAR003W CHZ1P40019 153 aaPredicted RBP8.87□□□□□ -0.99
SWD1YAR003W UBP14P38237 781 aaKnown RBP8.86□□□□□ -0.99
SWD1YAR003W RCM1P53972 490 aa8.86□□□□□ -0.99
SWD1YAR003W CHL1P22516 861 aaPredicted RBP8.85□□□□□ -0.99
SWD1YAR003W PRE3P38624 215 aa8.85□□□□□ -0.99
SWD1YAR003W VHR2P40041 505 aa8.85□□□□□ -0.99
SWD1YAR003W VPS70P47161 811 aa8.85□□□□□ -0.99
SWD1YAR003W PEX29Q03370 554 aa8.85□□□□□ -0.99
SWD1YAR003W YLR326WQ06170 240 aaKnown RBP8.85□□□□□ -0.99
SWD1YAR003W SEC3P33332 1336 aaKnown RBP8.83□□□□□ -1
SWD1YAR003W CPS1P27614 576 aa8.83□□□□□ -1
SWD1YAR003W SLI15P38283 698 aa8.83□□□□□ -1
SWD1YAR003W REF2P42073 533 aaPredicted RBP8.82□□□□□ -1
SWD1YAR003W PDS5Q04264 1277 aa8.82□□□□□ -1
SWD1YAR003W PSK1P31374 1356 aa8.82□□□□□ -1
SWD1YAR003W ELP4Q02884 456 aaKnown RBP8.81□□□□□ -1
SWD1YAR003W ARH1P48360 493 aa8.8□□□□□ -1
SWD1YAR003W PPH3P32345 308 aa8.79□□□□□ -1
SWD1YAR003W RAD54P32863 898 aa8.79□□□□□ -1
SWD1YAR003W MPC54Q08550 464 aa8.78□□□□□ -1
SWD1YAR003W LEU2P04173 364 aaPredicted RBP8.77□□□□□ -1.01
SWD1YAR003W PCS60P38137 543 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
SWD1YAR003W YDR344CQ05510 147 aa8.77□□□□□ -1.01
SWD1YAR003W MTR4P47047 1073 aaKnown RBP8.76□□□□□ -1.01
SWD1YAR003W KIC1P38692 1080 aa8.75□□□□□ -1.01
SWD1YAR003W YDR090CQ03193 310 aa8.75□□□□□ -1.01
SWD1YAR003W HAP5Q02516 242 aa8.74□□□□□ -1.01
SWD1YAR003W DPL1Q05567 589 aa8.74□□□□□ -1.01
SWD1YAR003W RTF1P53064 558 aa8.73□□□□□ -1.01
SWD1YAR003W CSE4P36012 229 aa8.72□□□□□ -1.01
SWD1YAR003W MAK21Q12176 1025 aaKnown RBP8.72□□□□□ -1.01
SWD1YAR003W MLP1Q02455 1875 aaKnown RBP8.71□□□□□ -1.01
SWD1YAR003W RPP1BP10622 106 aaKnown RBP8.71□□□□□ -1.02
SWD1YAR003W PDI1P17967 522 aaKnown RBP8.71□□□□□ -1.02
SWD1YAR003W SPT23P35210 1082 aa8.71□□□□□ -1.02
SWD1YAR003W SPT7P35177 1332 aa8.71□□□□□ -1.02
SWD1YAR003W BCK2P33306 851 aa8.7□□□□□ -1.02
SWD1YAR003W NMA111P53920 997 aa8.7□□□□□ -1.02
SWD1YAR003W ADE6P38972 1358 aaKnown RBP8.7□□□□□ -1.02
SWD1YAR003W LEU3P08638 886 aa8.69□□□□□ -1.02
SWD1YAR003W COX6P00427 148 aa8.68□□□□□ -1.02
SWD1YAR003W PRP45P28004 379 aaPredicted RBP8.68□□□□□ -1.02
SWD1YAR003W BNI4P53858 892 aa8.68□□□□□ -1.02
SWD1YAR003W CDC73Q06697 393 aa8.68□□□□□ -1.02
SWD1YAR003W YML133CQ03099 1374 aa8.68□□□□□ -1.02
SWD1YAR003W YLL067CQ07888 1374 aa8.68□□□□□ -1.02
SWD1YAR003W YLL066CQ99208 1374 aa8.68□□□□□ -1.02
SWD1YAR003W RPS24AP0CX31 135 aaKnown RBP8.67□□□□□ -1.02
SWD1YAR003W RPS24BP0CX32 135 aaKnown RBP8.67□□□□□ -1.02
SWD1YAR003W ISU2Q12056 156 aa8.67□□□□□ -1.02
SWD1YAR003W KAR2P16474 682 aaKnown RBP8.66□□□□□ -1.02
SWD1YAR003W GRX4P32642 244 aa8.66□□□□□ -1.02
SWD1YAR003W PRP43P53131 767 aaKnown RBP8.66□□□□□ -1.02
SWD1YAR003W PRP5P21372 849 aaPredicted RBP8.65□□□□□ -1.02
SWD1YAR003W TAP42Q04372 366 aa8.65□□□□□ -1.02
SWD1YAR003W PBS2P08018 668 aa8.64□□□□□ -1.03
SWD1YAR003W DPS1P04802 557 aaKnown RBP8.63□□□□□ -1.03
SWD1YAR003W ENP1P38333 483 aaKnown RBP8.63□□□□□ -1.03
SWD1YAR003W PTC2P39966 464 aaKnown RBP8.63□□□□□ -1.03
SWD1YAR003W VRP1P37370 817 aa8.62□□□□□ -1.03
SWD1YAR003W GAS4Q08271 471 aa8.62□□□□□ -1.03
SWD1YAR003W ENT1Q12518 454 aa8.62□□□□□ -1.03
SWD1YAR003W TY4B-HP0C2J7 1802 aa8.6□□□□□ -1.03
SWD1YAR003W TY4B-JP47024 1803 aa8.6□□□□□ -1.03
SWD1YAR003W PAP2P53632 584 aaKnown RBP8.6□□□□□ -1.03
SWD1YAR003W YML082WQ04533 649 aaKnown RBP8.6□□□□□ -1.03
SWD1YAR003W TCB1Q12466 1186 aa8.6□□□□□ -1.03
SWD1YAR003W RRP5Q05022 1729 aaKnown RBP8.6□□□□□ -1.03
SWD1YAR003W APP1P53933 587 aa8.59□□□□□ -1.03
SWD1YAR003W MSB3P48566 633 aaPredicted RBP8.58□□□□□ -1.04
SWD1YAR003W CSC1Q06538 782 aa8.58□□□□□ -1.04
SWD1YAR003W YEF3P16521 1044 aaKnown RBP8.57□□□□□ -1.04
SWD1YAR003W HIM1Q06674 414 aa8.57□□□□□ -1.04
SWD1YAR003W ENV9Q08651 330 aa8.57□□□□□ -1.04
SWD1YAR003W SLM3Q12093 417 aa8.57□□□□□ -1.04
SWD1YAR003W TRK1P12685 1235 aa8.56□□□□□ -1.04
SWD1YAR003W GAP1P19145 602 aaPredicted RBP8.56□□□□□ -1.04
SWD1YAR003W ORC6P38826 435 aa8.56□□□□□ -1.04
SWD1YAR003W XDJ1P39102 459 aa8.56□□□□□ -1.04
SWD1YAR003W PEX21P50091 288 aa8.56□□□□□ -1.04
SWD1YAR003W IMH1Q06704 911 aaKnown RBP8.55□□□□□ -1.04
SWD1YAR003W TFB4Q12004 338 aa8.55□□□□□ -1.04
SWD1YAR003W AUS1Q08409 1394 aa8.55□□□□□ -1.04
SWD1YAR003W RPO41P13433 1351 aaKnown RBP8.54□□□□□ -1.04
SWD1YAR003W DSF2P38213 736 aa8.54□□□□□ -1.04
SWD1YAR003W MAM3Q12296 706 aa8.54□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms