RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	CHL1	P22516	861 aa	Predicted RBP	5.87	□□□□□ -1.47
GEM1	YAL048C	EMP47	P43555	445 aa		5.87	□□□□□ -1.47
GEM1	YAL048C	TEC1	P18412	486 aa		5.87	□□□□□ -1.47
GEM1	YAL048C	YPR084W	Q06821	456 aa		5.87	□□□□□ -1.47
GEM1	YAL048C	TGL4	P36165	910 aa		5.86	□□□□□ -1.47
GEM1	YAL048C	KXD1	P53158	218 aa		5.86	□□□□□ -1.47
GEM1	YAL048C	PAT1	P25644	796 aa	Known RBP	5.85	□□□□□ -1.47
GEM1	YAL048C	HXT10	P43581	546 aa		5.85	□□□□□ -1.47
GEM1	YAL048C	YML020W	Q03722	664 aa		5.85	□□□□□ -1.47
GEM1	YAL048C	FRA1	Q07825	749 aa		5.85	□□□□□ -1.47
GEM1	YAL048C	SPT16	P32558	1035 aa	Known RBP	5.84	□□□□□ -1.47
GEM1	YAL048C	KTR7	P40504	517 aa		5.84	□□□□□ -1.47
GEM1	YAL048C	GUT2	P32191	649 aa		5.84	□□□□□ -1.48
GEM1	YAL048C	MOD5	P07884	428 aa		5.83	□□□□□ -1.48
GEM1	YAL048C	SLX8	P40072	274 aa		5.83	□□□□□ -1.48
GEM1	YAL048C	RRD1	P40454	393 aa	Known RBP	5.83	□□□□□ -1.48
GEM1	YAL048C	STE20	Q03497	939 aa	Known RBP	5.83	□□□□□ -1.48
GEM1	YAL048C	GYP1	Q08484	637 aa		5.83	□□□□□ -1.48
GEM1	YAL048C	TPD3	P31383	635 aa		5.82	□□□□□ -1.48
GEM1	YAL048C	RPL34A	P87262	121 aa	Predicted RBP	5.82	□□□□□ -1.48
GEM1	YAL048C	ENV9	Q08651	330 aa		5.82	□□□□□ -1.48
GEM1	YAL048C	NAP1	P25293	417 aa	Known RBP	5.82	□□□□□ -1.48
GEM1	YAL048C	VAC17	P25591	423 aa		5.81	□□□□□ -1.48
GEM1	YAL048C	APL6	P46682	809 aa		5.81	□□□□□ -1.48
GEM1	YAL048C	MRX12	P47084	519 aa		5.8	□□□□□ -1.48
GEM1	YAL048C	ECM23	Q02710	187 aa		5.8	□□□□□ -1.48
GEM1	YAL048C	SAS4	Q04003	481 aa		5.8	□□□□□ -1.48
GEM1	YAL048C	NOP8	Q08287	484 aa	Predicted RBP	5.8	□□□□□ -1.48
GEM1	YAL048C	ITT1	Q04638	464 aa		5.8	□□□□□ -1.48
GEM1	YAL048C	TCB3	Q03640	1545 aa	Known RBP	5.79	□□□□□ -1.48
GEM1	YAL048C	SDH2	P21801	266 aa		5.78	□□□□□ -1.48
GEM1	YAL048C	SOH1	P38633	127 aa		5.78	□□□□□ -1.48
GEM1	YAL048C	AIM44	Q99299	758 aa		5.78	□□□□□ -1.48
GEM1	YAL048C	GAL2	P13181	574 aa		5.78	□□□□□ -1.48
GEM1	YAL048C	CDC3	P32457	520 aa	Known RBP	5.78	□□□□□ -1.48
GEM1	YAL048C	ATG3	P40344	310 aa		5.77	□□□□□ -1.49
GEM1	YAL048C	IXR1	P33417	597 aa		5.76	□□□□□ -1.49
GEM1	YAL048C	UBX7	P38349	436 aa		5.76	□□□□□ -1.49
GEM1	YAL048C	UTP13	Q05946	817 aa	Known RBP	5.76	□□□□□ -1.49
GEM1	YAL048C	VRP1	P37370	817 aa		5.75	□□□□□ -1.49
GEM1	YAL048C	HAL5	P38970	855 aa	Known RBP	5.75	□□□□□ -1.49
GEM1	YAL048C	IOC4	Q04213	475 aa		5.75	□□□□□ -1.49
GEM1	YAL048C	PUS5	Q06244	254 aa		5.75	□□□□□ -1.49
GEM1	YAL048C	PHO87	P25360	923 aa		5.74	□□□□□ -1.49
GEM1	YAL048C	BDP1	P46678	594 aa		5.74	□□□□□ -1.49
GEM1	YAL048C	ACS2	P52910	683 aa	Known RBP	5.74	□□□□□ -1.49
GEM1	YAL048C	MRF1	P30775	413 aa	Predicted RBP	5.73	□□□□□ -1.49
GEM1	YAL048C	CST6	P40535	587 aa		5.73	□□□□□ -1.49
GEM1	YAL048C	ISR1	Q06098	443 aa	Known RBP	5.73	□□□□□ -1.49
GEM1	YAL048C	YEL077C	Q3E7X8	1277 aa		5.73	□□□□□ -1.49
GEM1	YAL048C	KIP2	P28743	706 aa		5.72	□□□□□ -1.49
GEM1	YAL048C	SSF1	P38789	453 aa	Predicted RBP	5.72	□□□□□ -1.49
GEM1	YAL048C	ROM1	P53046	1155 aa		5.72	□□□□□ -1.49
GEM1	YAL048C	TPS3	P38426	1054 aa	Known RBP	5.71	□□□□□ -1.49
GEM1	YAL048C	FRK1	Q03002	865 aa	Predicted RBP	5.71	□□□□□ -1.49
GEM1	YAL048C	HAT1	Q12341	374 aa		5.71	□□□□□ -1.49
GEM1	YAL048C	TY1B-DR4	Q07793	1604 aa		5.71	□□□□□ -1.5
GEM1	YAL048C	HAP4	P14064	554 aa		5.71	□□□□□ -1.5
GEM1	YAL048C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
GEM1	YAL048C	MIP1	P15801	1254 aa		5.7	□□□□□ -1.5
GEM1	YAL048C	PDI1	P17967	522 aa	Known RBP	5.7	□□□□□ -1.5
GEM1	YAL048C	APP1	P53933	587 aa		5.7	□□□□□ -1.5
GEM1	YAL048C	ATG20	Q07528	640 aa		5.7	□□□□□ -1.5
GEM1	YAL048C	TSC13	Q99190	310 aa		5.69	□□□□□ -1.5
GEM1	YAL048C	EMW1	P42842	904 aa	Known RBP	5.69	□□□□□ -1.5
GEM1	YAL048C	ORC1	P54784	914 aa	Predicted RBP	5.69	□□□□□ -1.5
GEM1	YAL048C	SYH1	Q02875	849 aa	Known RBP	5.69	□□□□□ -1.5
GEM1	YAL048C	CWC15	Q03772	175 aa	Known RBP	5.68	□□□□□ -1.5
GEM1	YAL048C	URN1	Q06525	465 aa	Known RBP	5.68	□□□□□ -1.5
GEM1	YAL048C	HDA3	Q06623	655 aa		5.68	□□□□□ -1.5
GEM1	YAL048C	GAS4	Q08271	471 aa		5.68	□□□□□ -1.5
GEM1	YAL048C	AIM9	P40053	627 aa	Known RBP	5.67	□□□□□ -1.5
GEM1	YAL048C	BCK2	P33306	851 aa		5.67	□□□□□ -1.5
GEM1	YAL048C	PUF6	Q04373	656 aa	Known RBP	5.66	□□□□□ -1.5
GEM1	YAL048C	SEN54	Q02825	467 aa	Predicted RBP	5.65	□□□□□ -1.51
GEM1	YAL048C	YFL034W	P43564	1073 aa		5.64	□□□□□ -1.51
GEM1	YAL048C	YBL113C	Q7M4S9	792 aa		5.64	□□□□□ -1.51
GEM1	YAL048C	FBP26	P32604	452 aa		5.64	□□□□□ -1.51
GEM1	YAL048C	MKS1	P34072	584 aa		5.64	□□□□□ -1.51
GEM1	YAL048C	SLD2	P34252	453 aa		5.64	□□□□□ -1.51
GEM1	YAL048C	NTH2	P35172	780 aa		5.64	□□□□□ -1.51
GEM1	YAL048C	ISU1	Q03020	165 aa		5.64	□□□□□ -1.51
GEM1	YAL048C	KAR5	Q04746	504 aa		5.64	□□□□□ -1.51
GEM1	YAL048C	MRT4	P33201	236 aa	Known RBP	5.63	□□□□□ -1.51
GEM1	YAL048C	ERP5	P38819	212 aa		5.63	□□□□□ -1.51
GEM1	YAL048C	BOL3	P39724	118 aa		5.63	□□□□□ -1.51
GEM1	YAL048C	PNP1	Q05788	311 aa		5.63	□□□□□ -1.51
GEM1	YAL048C	PUN1	Q06991	263 aa		5.63	□□□□□ -1.51
GEM1	YAL048C	SPA2	P23201	1466 aa	Known RBP	5.62	□□□□□ -1.51
GEM1	YAL048C	SPT2	P06843	333 aa	Predicted RBP	5.62	□□□□□ -1.51
GEM1	YAL048C	VAN1	P23642	535 aa		5.62	□□□□□ -1.51
GEM1	YAL048C	UTR2	P32623	467 aa		5.62	□□□□□ -1.51
GEM1	YAL048C	SWI5	P08153	709 aa		5.62	□□□□□ -1.51
GEM1	YAL048C	RPS6A	P0CX37	236 aa	Known RBP	5.62	□□□□□ -1.51
GEM1	YAL048C	RPS6B	P0CX38	236 aa	Predicted RBP	5.62	□□□□□ -1.51
GEM1	YAL048C	SRS2	P12954	1174 aa		5.62	□□□□□ -1.51
GEM1	YAL048C	SUV3	P32580	737 aa		5.62	□□□□□ -1.51
GEM1	YAL048C	XDJ1	P39102	459 aa		5.62	□□□□□ -1.51
GEM1	YAL048C	CYT1	P07143	309 aa		5.61	□□□□□ -1.51
GEM1	YAL048C	AMS1	P22855	1083 aa		5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms