RNA–Protein interactions for RNA: ENST00000641053.1

SAMMSON-206, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-206ENST00000641053 NEFMP07197 916 aa13.13□□□□□ -0.31
SAMMSON-206ENST00000641053 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
SAMMSON-206ENST00000641053 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
SAMMSON-206ENST00000641053 IER5LQ5T953 404 aa13.12□□□□□ -0.31
SAMMSON-206ENST00000641053 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
SAMMSON-206ENST00000641053 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
SAMMSON-206ENST00000641053 SGIP1Q9BQI5 828 aa13.12□□□□□ -0.31
SAMMSON-206ENST00000641053 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
SAMMSON-206ENST00000641053 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
SAMMSON-206ENST00000641053 ANP32AP39687 249 aaKnown RBP13.1□□□□□ -0.31
SAMMSON-206ENST00000641053 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
SAMMSON-206ENST00000641053 PDCL3Q9H2J4 239 aa13.08□□□□□ -0.32
SAMMSON-206ENST00000641053 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
SAMMSON-206ENST00000641053 SLAIN1Q8ND83 568 aa13.06□□□□□ -0.32
SAMMSON-206ENST00000641053 PRDM4Q9UKN5 801 aa13.06□□□□□ -0.32
SAMMSON-206ENST00000641053 GTF2E1P29083 439 aaPredicted RBP13.05□□□□□ -0.32
SAMMSON-206ENST00000641053 CUX1P39880 1505 aa13.04□□□□□ -0.32
SAMMSON-206ENST00000641053 PTMSP20962 102 aa13.04□□□□□ -0.32
SAMMSON-206ENST00000641053 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
SAMMSON-206ENST00000641053 MAP7D2Q96T17 732 aa13.04□□□□□ -0.32
SAMMSON-206ENST00000641053 PTMAP06454 111 aaKnown RBP13.03□□□□□ -0.32
SAMMSON-206ENST00000641053 PKD2Q13563 968 aa13.03□□□□□ -0.32
SAMMSON-206ENST00000641053 IPO9Q96P70 1041 aaKnown RBP13.03□□□□□ -0.32
SAMMSON-206ENST00000641053 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
SAMMSON-206ENST00000641053 CCDC9Q9Y3X0 531 aaKnown RBP13.03□□□□□ -0.32
SAMMSON-206ENST00000641053 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
SAMMSON-206ENST00000641053 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
SAMMSON-206ENST00000641053 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
SAMMSON-206ENST00000641053 ST18O60284 1047 aa13□□□□□ -0.33
SAMMSON-206ENST00000641053 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
SAMMSON-206ENST00000641053 CHD1O14646 1710 aa13□□□□□ -0.33
SAMMSON-206ENST00000641053 CLSTN1O94985 981 aa12.99□□□□□ -0.33
SAMMSON-206ENST00000641053 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
SAMMSON-206ENST00000641053 TARBP1Q13395 1621 aaKnown RBP12.99□□□□□ -0.33
SAMMSON-206ENST00000641053 TPM2P07951 284 aa12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 PLCG2P16885 1265 aa12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 TAF3Q5VWG9 929 aa12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 TICAM2Q86XR7 235 aa12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 RNF25Q96BH1 459 aaPredicted RBP12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 BIVM-ERCC5R4GMW8 1640 aa12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 CLGNO14967 610 aa12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 SMAP1Q8IYB5 467 aaPredicted RBP12.98□□□□□ -0.33
SAMMSON-206ENST00000641053 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
SAMMSON-206ENST00000641053 TOP2BQ02880 1626 aa12.97□□□□□ -0.33
SAMMSON-206ENST00000641053 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.33
SAMMSON-206ENST00000641053 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
SAMMSON-206ENST00000641053 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
SAMMSON-206ENST00000641053 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
SAMMSON-206ENST00000641053 UTP14CQ5TAP6 766 aaKnown RBP12.94□□□□□ -0.34
SAMMSON-206ENST00000641053 BRPF3Q9ULD4 1205 aa12.94□□□□□ -0.34
SAMMSON-206ENST00000641053 WDR97A6NE52 1622 aa12.94□□□□□ -0.34
SAMMSON-206ENST00000641053 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
SAMMSON-206ENST00000641053 SOGA1O94964 1423 aa12.93□□□□□ -0.34
SAMMSON-206ENST00000641053 MTERF4Q7Z6M4 381 aaKnown RBP12.93□□□□□ -0.34
SAMMSON-206ENST00000641053 SECISBP2LQ93073 1101 aaKnown RBP12.93□□□□□ -0.34
SAMMSON-206ENST00000641053 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
SAMMSON-206ENST00000641053 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
SAMMSON-206ENST00000641053 MCCP23508 829 aa12.91□□□□□ -0.34
SAMMSON-206ENST00000641053 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.9□□□□□ -0.34
SAMMSON-206ENST00000641053 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
SAMMSON-206ENST00000641053 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.35
SAMMSON-206ENST00000641053 ABCA10Q8WWZ4 1543 aa12.89□□□□□ -0.35
SAMMSON-206ENST00000641053 TMEM132AQ24JP5 1023 aa12.88□□□□□ -0.35
SAMMSON-206ENST00000641053 RGL2O15211 777 aa12.88□□□□□ -0.35
SAMMSON-206ENST00000641053 PSEN1P49768 467 aa12.88□□□□□ -0.35
SAMMSON-206ENST00000641053 LAS1LQ9Y4W2 734 aaKnown RBP12.88□□□□□ -0.35
SAMMSON-206ENST00000641053 GRIPAP1Q4V328 841 aa12.87□□□□□ -0.35
SAMMSON-206ENST00000641053 CHMP7Q8WUX9 453 aaPredicted RBP12.87□□□□□ -0.35
SAMMSON-206ENST00000641053 TRIM44Q96DX7 344 aaPredicted RBP12.87□□□□□ -0.35
SAMMSON-206ENST00000641053 EEA1Q15075 1411 aa12.86□□□□□ -0.35
SAMMSON-206ENST00000641053 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
SAMMSON-206ENST00000641053 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
SAMMSON-206ENST00000641053 PPP4R2Q9NY27 417 aa12.86□□□□□ -0.35
SAMMSON-206ENST00000641053 RGS3P49796 1198 aa12.85□□□□□ -0.35
SAMMSON-206ENST00000641053 IRX3P78415 501 aaPredicted RBP12.85□□□□□ -0.35
SAMMSON-206ENST00000641053 PDAP1Q13442 181 aaKnown RBP12.85□□□□□ -0.35
SAMMSON-206ENST00000641053 L1TD1Q5T7N2 865 aaKnown RBP12.85□□□□□ -0.35
SAMMSON-206ENST00000641053 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
SAMMSON-206ENST00000641053 CLASP1Q7Z460 1538 aa12.85□□□□□ -0.35
SAMMSON-206ENST00000641053 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
SAMMSON-206ENST00000641053 CLCN1P35523 988 aa12.84□□□□□ -0.35
SAMMSON-206ENST00000641053 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
SAMMSON-206ENST00000641053 SNPHO15079 494 aa12.83□□□□□ -0.35
SAMMSON-206ENST00000641053 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.35
SAMMSON-206ENST00000641053 PLCD4Q9BRC7 762 aa12.83□□□□□ -0.36
SAMMSON-206ENST00000641053 TMEM121BQ9BXQ6 578 aaPredicted RBP12.83□□□□□ -0.36
SAMMSON-206ENST00000641053 SNAPC4Q5SXM2 1469 aa12.82□□□□□ -0.36
SAMMSON-206ENST00000641053 KIF20AO95235 890 aa12.82□□□□□ -0.36
SAMMSON-206ENST00000641053 ITGAEP38570 1179 aa12.82□□□□□ -0.36
SAMMSON-206ENST00000641053 MMP14P50281 582 aa12.81□□□□□ -0.36
SAMMSON-206ENST00000641053 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
SAMMSON-206ENST00000641053 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
SAMMSON-206ENST00000641053 GOLGA6L3A6NEY3 463 aa12.8□□□□□ -0.36
SAMMSON-206ENST00000641053 PHF14O94880 888 aa12.8□□□□□ -0.36
SAMMSON-206ENST00000641053 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
SAMMSON-206ENST00000641053 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
SAMMSON-206ENST00000641053 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
SAMMSON-206ENST00000641053 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms