RNA–Protein interactions for RNA: ENST00000641053.1

SAMMSON-206, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-206ENST00000641053 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
SAMMSON-206ENST00000641053 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
SAMMSON-206ENST00000641053 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
SAMMSON-206ENST00000641053 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
SAMMSON-206ENST00000641053 FOXD1Q16676 465 aa22.44■■□□□ 1.18
SAMMSON-206ENST00000641053 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
SAMMSON-206ENST00000641053 MSH5O43196 834 aa21.19■□□□□ 0.98
SAMMSON-206ENST00000641053 PIAS4Q8N2W9 510 aaPredicted RBP20.88■□□□□ 0.93
SAMMSON-206ENST00000641053 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
SAMMSON-206ENST00000641053 PPP6R1Q9UPN7 881 aa20.62■□□□□ 0.89
SAMMSON-206ENST00000641053 ADRA2BP18089 450 aa20.55■□□□□ 0.88
SAMMSON-206ENST00000641053 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
SAMMSON-206ENST00000641053 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
SAMMSON-206ENST00000641053 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
SAMMSON-206ENST00000641053 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
SAMMSON-206ENST00000641053 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
SAMMSON-206ENST00000641053 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
SAMMSON-206ENST00000641053 MYT1Q01538 1121 aa18.19■□□□□ 0.5
SAMMSON-206ENST00000641053 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
SAMMSON-206ENST00000641053 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.49
SAMMSON-206ENST00000641053 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
SAMMSON-206ENST00000641053 RNF39Q9H2S5 420 aa18.02■□□□□ 0.47
SAMMSON-206ENST00000641053 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
SAMMSON-206ENST00000641053 RNF216Q9NWF9 866 aaPredicted RBP17.84■□□□□ 0.45
SAMMSON-206ENST00000641053 C1QBPQ07021 282 aaKnown RBP17.75■□□□□ 0.43
SAMMSON-206ENST00000641053 TTBK1Q5TCY1 1321 aaPredicted RBP17.63■□□□□ 0.41
SAMMSON-206ENST00000641053 KCNA4P22459 653 aa17.62■□□□□ 0.41
SAMMSON-206ENST00000641053 NCBP3Q53F19 620 aaKnown RBP17.58■□□□□ 0.41
SAMMSON-206ENST00000641053 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
SAMMSON-206ENST00000641053 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
SAMMSON-206ENST00000641053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
SAMMSON-206ENST00000641053 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
SAMMSON-206ENST00000641053 CAPN15O75808 1086 aa16.76■□□□□ 0.27
SAMMSON-206ENST00000641053 DSG3P32926 999 aa16.73■□□□□ 0.27
SAMMSON-206ENST00000641053 POTEHQ6S545 545 aa16.73■□□□□ 0.27
SAMMSON-206ENST00000641053 SPINK5Q9NQ38 1064 aaPredicted RBP16.72■□□□□ 0.27
SAMMSON-206ENST00000641053 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
SAMMSON-206ENST00000641053 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
SAMMSON-206ENST00000641053 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
SAMMSON-206ENST00000641053 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
SAMMSON-206ENST00000641053 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
SAMMSON-206ENST00000641053 APLP2Q06481 763 aa16.36■□□□□ 0.21
SAMMSON-206ENST00000641053 ABCB7O75027 752 aa16.32■□□□□ 0.2
SAMMSON-206ENST00000641053 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
SAMMSON-206ENST00000641053 ABCC9O60706 1549 aa16.27■□□□□ 0.19
SAMMSON-206ENST00000641053 ZBTB22O15209 634 aa16.25■□□□□ 0.19
SAMMSON-206ENST00000641053 PRKCSHP14314 528 aaPredicted RBP16.24■□□□□ 0.19
SAMMSON-206ENST00000641053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
SAMMSON-206ENST00000641053 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
SAMMSON-206ENST00000641053 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
SAMMSON-206ENST00000641053 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
SAMMSON-206ENST00000641053 CCDC180Q9P1Z9 1646 aa16.08■□□□□ 0.16
SAMMSON-206ENST00000641053 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
SAMMSON-206ENST00000641053 HRCP23327 699 aa16.01■□□□□ 0.15
SAMMSON-206ENST00000641053 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
SAMMSON-206ENST00000641053 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
SAMMSON-206ENST00000641053 DAXXQ9UER7 740 aaPredicted RBP15.94■□□□□ 0.14
SAMMSON-206ENST00000641053 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
SAMMSON-206ENST00000641053 POLA2Q14181 598 aa15.83■□□□□ 0.12
SAMMSON-206ENST00000641053 CHRDL2Q6WN34 429 aa15.82■□□□□ 0.12
SAMMSON-206ENST00000641053 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
SAMMSON-206ENST00000641053 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
SAMMSON-206ENST00000641053 CENPBP07199 599 aaPredicted RBP15.61■□□□□ 0.09
SAMMSON-206ENST00000641053 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
SAMMSON-206ENST00000641053 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
SAMMSON-206ENST00000641053 SP7Q8TDD2 431 aaPredicted RBP15.47■□□□□ 0.07
SAMMSON-206ENST00000641053 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
SAMMSON-206ENST00000641053 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
SAMMSON-206ENST00000641053 FAM9AQ8IZU1 332 aaPredicted RBP15.38■□□□□ 0.05
SAMMSON-206ENST00000641053 PIP4P2Q8N4L2 257 aa15.34■□□□□ 0.05
SAMMSON-206ENST00000641053 EIF5BO60841 1220 aaKnown RBP15.33■□□□□ 0.04
SAMMSON-206ENST00000641053 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
SAMMSON-206ENST00000641053 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
SAMMSON-206ENST00000641053 HAX1O00165 279 aa15.23■□□□□ 0.03
SAMMSON-206ENST00000641053 PITPNM1O00562 1244 aa15.21■□□□□ 0.03
SAMMSON-206ENST00000641053 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
SAMMSON-206ENST00000641053 ZEB1P37275 1124 aaPredicted RBP15.13■□□□□ 0.01
SAMMSON-206ENST00000641053 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
SAMMSON-206ENST00000641053 ANP32EQ9BTT0 268 aa15.09■□□□□ 0.01
SAMMSON-206ENST00000641053 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0.01
SAMMSON-206ENST00000641053 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
SAMMSON-206ENST00000641053 NACADO15069 1562 aa15.07■□□□□ 0
SAMMSON-206ENST00000641053 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
SAMMSON-206ENST00000641053 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
SAMMSON-206ENST00000641053 DCAF1Q9Y4B6 1507 aa15.01□□□□□ -0.01
SAMMSON-206ENST00000641053 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
SAMMSON-206ENST00000641053 FBLN2P98095 1184 aa14.97□□□□□ -0.01
SAMMSON-206ENST00000641053 EVX2Q03828 476 aa14.95□□□□□ -0.02
SAMMSON-206ENST00000641053 UBE2Q2Q8WVN8 375 aa14.95□□□□□ -0.02
SAMMSON-206ENST00000641053 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
SAMMSON-206ENST00000641053 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
SAMMSON-206ENST00000641053 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
SAMMSON-206ENST00000641053 PPARGC1BQ86YN6 1023 aaKnown RBP14.89□□□□□ -0.03
SAMMSON-206ENST00000641053 UNC13AQ9UPW8 1703 aa14.85□□□□□ -0.03
SAMMSON-206ENST00000641053 PRKAR2AP13861 404 aaKnown RBP14.84□□□□□ -0.03
SAMMSON-206ENST00000641053 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
SAMMSON-206ENST00000641053 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
SAMMSON-206ENST00000641053 GTF3C3Q9Y5Q9 886 aa14.81□□□□□ -0.04
SAMMSON-206ENST00000641053 BICRAQ9NZM4 1560 aa14.8□□□□□ -0.04
SAMMSON-206ENST00000641053 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms