RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 TCERG1O14776 1098 aaKnown RBP8.56□□□□□ -1.04
CHD2-208ENST00000626874 ANKRD20A12PQ8NF67 263 aa8.56□□□□□ -1.04
CHD2-208ENST00000626874 ATP6V1DQ9Y5K8 247 aa8.56□□□□□ -1.04
CHD2-208ENST00000626874 SF3B2Q13435 895 aaKnown RBP8.55□□□□□ -1.04
CHD2-208ENST00000626874 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
CHD2-208ENST00000626874 U2AF1L5P0DN76 240 aaPredicted RBP8.55□□□□□ -1.04
CHD2-208ENST00000626874 U2AF1Q01081 240 aaKnown RBP eCLIP8.55□□□□□ -1.042e-7■□□□□ 10.6
CHD2-208ENST00000626874 TTC5Q8N0Z6 440 aa8.55□□□□□ -1.04
CHD2-208ENST00000626874 WASHC2CQ9Y4E1 1318 aa8.54□□□□□ -1.04
CHD2-208ENST00000626874 SF3A1Q15459 793 aaKnown RBP8.54□□□□□ -1.04
CHD2-208ENST00000626874 VPS37DQ86XT2 251 aa8.54□□□□□ -1.04
CHD2-208ENST00000626874 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHD2-208ENST00000626874 PHF23Q9BUL5 403 aaPredicted RBP8.54□□□□□ -1.04
CHD2-208ENST00000626874 CCDC18Q5T9S5 1454 aa8.54□□□□□ -1.04
CHD2-208ENST00000626874 TOMM22Q9NS69 142 aa8.54□□□□□ -1.04
CHD2-208ENST00000626874 IPO7O95373 1038 aaKnown RBP8.54□□□□□ -1.04
CHD2-208ENST00000626874 SETQ01105 290 aaPredicted RBP8.54□□□□□ -1.04
CHD2-208ENST00000626874 CARMIL1Q5VZK9 1371 aa8.54□□□□□ -1.04
CHD2-208ENST00000626874 TNIKQ9UKE5 1360 aa8.54□□□□□ -1.04
CHD2-208ENST00000626874 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
CHD2-208ENST00000626874 ST18O60284 1047 aa8.53□□□□□ -1.04
CHD2-208ENST00000626874 DDX58O95786 925 aaKnown RBP8.52□□□□□ -1.04
CHD2-208ENST00000626874 TRIM29Q14134 588 aa8.52□□□□□ -1.04
CHD2-208ENST00000626874 CUX2O14529 1486 aa8.52□□□□□ -1.05
CHD2-208ENST00000626874 SAFB2Q14151 953 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD2-208ENST00000626874 ITPRIPQ8IWB1 547 aa8.52□□□□□ -1.05
CHD2-208ENST00000626874 GPS2Q13227 327 aa8.52□□□□□ -1.05
CHD2-208ENST00000626874 SETD5Q9C0A6 1442 aa8.52□□□□□ -1.05
CHD2-208ENST00000626874 CCAR1Q8IX12 1150 aaKnown RBP8.52□□□□□ -1.05
CHD2-208ENST00000626874 RUFY2Q8WXA3 655 aa8.51□□□□□ -1.05
CHD2-208ENST00000626874 RBM33Q96EV2 1170 aaKnown RBP8.51□□□□□ -1.05
CHD2-208ENST00000626874 ROCK1Q13464 1354 aa8.51□□□□□ -1.05
CHD2-208ENST00000626874 H3BQV1 296 aa8.5□□□□□ -1.05
CHD2-208ENST00000626874 IFFO2Q5TF58 517 aa8.5□□□□□ -1.05
CHD2-208ENST00000626874 ERICH2A1L162 156 aa8.5□□□□□ -1.05
CHD2-208ENST00000626874 CDR1P51861 262 aa8.5□□□□□ -1.05
CHD2-208ENST00000626874 TEFQ10587 303 aa8.5□□□□□ -1.05
CHD2-208ENST00000626874 ODF2Q5BJF6 829 aa8.5□□□□□ -1.05
CHD2-208ENST00000626874 TRDNQ13061 729 aa8.5□□□□□ -1.05
CHD2-208ENST00000626874 ABCC8Q09428 1581 aa8.49□□□□□ -1.05
CHD2-208ENST00000626874 FAM184AQ8NB25 1140 aa8.49□□□□□ -1.05
CHD2-208ENST00000626874 IRX6P78412 446 aaPredicted RBP8.49□□□□□ -1.05
CHD2-208ENST00000626874 VGFO15240 615 aaPredicted RBP8.49□□□□□ -1.05
CHD2-208ENST00000626874 ATF3P18847 181 aa8.49□□□□□ -1.05
CHD2-208ENST00000626874 WDHD1O75717 1129 aaPredicted RBP8.49□□□□□ -1.05
CHD2-208ENST00000626874 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.48□□□□□ -1.052e-6■■■■■ 36.2
CHD2-208ENST00000626874 PES1O00541 588 aaKnown RBP8.48□□□□□ -1.05
CHD2-208ENST00000626874 COG3Q96JB2 828 aa8.48□□□□□ -1.05
CHD2-208ENST00000626874 NOP58Q9Y2X3 529 aaKnown RBP8.48□□□□□ -1.05
CHD2-208ENST00000626874 NUP155O75694 1391 aa8.48□□□□□ -1.05
CHD2-208ENST00000626874 KIF3BO15066 747 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 GOLGA6L19H0YKK7 550 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 CREBRFQ8IUR6 639 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 MYO6Q9UM54 1294 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 TNNT3P45378 269 aaPredicted RBP8.47□□□□□ -1.05
CHD2-208ENST00000626874 DNAI2Q9GZS0 605 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 SUPT16HQ9Y5B9 1047 aaKnown RBP8.47□□□□□ -1.05
CHD2-208ENST00000626874 EVC2Q86UK5 1308 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 RNF20Q5VTR2 975 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 NGEFQ8N5V2 710 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 BRMS1Q9HCU9 246 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 CCER2I3L3R5 266 aa8.47□□□□□ -1.05
CHD2-208ENST00000626874 TRIM21P19474 475 aaKnown RBP8.46□□□□□ -1.05
CHD2-208ENST00000626874 CT47A1Q5JQC4 288 aaPredicted RBP8.46□□□□□ -1.05
CHD2-208ENST00000626874 APBB1O00213 710 aa8.46□□□□□ -1.06
CHD2-208ENST00000626874 XBP1P17861 261 aa8.46□□□□□ -1.06
CHD2-208ENST00000626874 PSME1Q06323 249 aa8.46□□□□□ -1.06
CHD2-208ENST00000626874 RRP12Q5JTH9 1297 aaKnown RBP8.46□□□□□ -1.06
CHD2-208ENST00000626874 PKD2Q13563 968 aa8.46□□□□□ -1.06
CHD2-208ENST00000626874 HIRIP3Q9BW71 556 aaPredicted RBP8.46□□□□□ -1.06
CHD2-208ENST00000626874 CGNL1Q0VF96 1302 aa8.45□□□□□ -1.06
CHD2-208ENST00000626874 CCDC173Q0VFZ6 552 aa8.45□□□□□ -1.06
CHD2-208ENST00000626874 SLC4A10Q6U841 1118 aa8.45□□□□□ -1.06
CHD2-208ENST00000626874 DHX16O60231 1041 aaKnown RBP8.45□□□□□ -1.06
CHD2-208ENST00000626874 ZKSCAN1P17029 563 aaPredicted RBP8.45□□□□□ -1.06
CHD2-208ENST00000626874 SAFBQ15424 915 aaKnown RBP eCLIP8.45□□□□□ -1.06
CHD2-208ENST00000626874 SLC3A2P08195 630 aaKnown RBP8.45□□□□□ -1.06
CHD2-208ENST00000626874 MFAP1P55081 439 aaKnown RBP8.45□□□□□ -1.06
CHD2-208ENST00000626874 SOGA1O94964 1423 aa8.45□□□□□ -1.06
CHD2-208ENST00000626874 HSP90AB4PQ58FF6 505 aa8.45□□□□□ -1.06
CHD2-208ENST00000626874 PDE3BQ13370 1112 aa8.45□□□□□ -1.06
CHD2-208ENST00000626874 C9orf78Q9NZ63 289 aaPredicted RBP8.45□□□□□ -1.06
CHD2-208ENST00000626874 PDE4CQ08493 712 aa8.44□□□□□ -1.06
CHD2-208ENST00000626874 STAC3Q96MF2 364 aa8.44□□□□□ -1.06
CHD2-208ENST00000626874 RAD21O60216 631 aa8.44□□□□□ -1.06
CHD2-208ENST00000626874 ZRSR2Q15696 482 aaKnown RBP8.44□□□□□ -1.06
CHD2-208ENST00000626874 MIA2Q96PC5 1412 aa8.43□□□□□ -1.06
CHD2-208ENST00000626874 CPLX1O14810 134 aa8.43□□□□□ -1.06
CHD2-208ENST00000626874 DIAPH3Q9NSV4 1193 aa8.43□□□□□ -1.06
CHD2-208ENST00000626874 PAF1Q8N7H5 531 aa8.43□□□□□ -1.06
CHD2-208ENST00000626874 EPS15P42566 896 aa8.43□□□□□ -1.06
CHD2-208ENST00000626874 FBXW7Q969H0 707 aa8.43□□□□□ -1.06
CHD2-208ENST00000626874 OSCARQ8IYS5 282 aa8.43□□□□□ -1.06
CHD2-208ENST00000626874 BECN2A8MW95 431 aa8.42□□□□□ -1.06
CHD2-208ENST00000626874 DESP17661 470 aa8.42□□□□□ -1.06
CHD2-208ENST00000626874 PCMTD1Q96MG8 357 aaPredicted RBP8.42□□□□□ -1.06
CHD2-208ENST00000626874 KLHL34Q8N239 644 aa8.42□□□□□ -1.06
CHD2-208ENST00000626874 CENPJQ9HC77 1338 aaPredicted RBP8.42□□□□□ -1.06
CHD2-208ENST00000626874 LTV1Q96GA3 475 aaPredicted RBP8.42□□□□□ -1.06
CHD2-208ENST00000626874 REC8O95072 547 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms