RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-233ENST00000621708 PDE3BQ13370 1112 aa11.26□□□□□ -0.61
PCDH15-233ENST00000621708 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
PCDH15-233ENST00000621708 KIF14Q15058 1648 aa11.26□□□□□ -0.61
PCDH15-233ENST00000621708 U2AF1L5P0DN76 240 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-233ENST00000621708 IRX6P78412 446 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-233ENST00000621708 U2AF1Q01081 240 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCDH15-233ENST00000621708 PCF11O94913 1555 aaKnown RBP11.25□□□□□ -0.61
PCDH15-233ENST00000621708 MYBBP1AQ9BQG0 1328 aaKnown RBP11.25□□□□□ -0.61
PCDH15-233ENST00000621708 DAPK1P53355 1430 aa11.25□□□□□ -0.61
PCDH15-233ENST00000621708 ST20-MTHFSA0A0A6YYL1 179 aa11.25□□□□□ -0.61
PCDH15-233ENST00000621708 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
PCDH15-233ENST00000621708 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
PCDH15-233ENST00000621708 POGZQ7Z3K3 1410 aa11.24□□□□□ -0.61
PCDH15-233ENST00000621708 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
PCDH15-233ENST00000621708 KIAA1107Q9UPP5 1409 aa11.23□□□□□ -0.61
PCDH15-233ENST00000621708 NGEFQ8N5V2 710 aa11.23□□□□□ -0.61
PCDH15-233ENST00000621708 CCDC141Q6ZP82 1450 aa11.23□□□□□ -0.61
PCDH15-233ENST00000621708 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 HDAC5Q9UQL6 1122 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 SOX12O15370 315 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 AFAP1Q8N556 730 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 ARXQ96QS3 562 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
PCDH15-233ENST00000621708 CDK13Q14004 1512 aaKnown RBP11.21□□□□□ -0.62
PCDH15-233ENST00000621708 SCAPERQ9BY12 1400 aa11.21□□□□□ -0.62
PCDH15-233ENST00000621708 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.62
PCDH15-233ENST00000621708 ZNF608Q9ULD9 1512 aaPredicted RBP11.2□□□□□ -0.62
PCDH15-233ENST00000621708 COG3Q96JB2 828 aa11.2□□□□□ -0.62
PCDH15-233ENST00000621708 SLC52A1Q9NWF4 448 aa11.2□□□□□ -0.62
PCDH15-233ENST00000621708 AMPHP49418 695 aa11.19□□□□□ -0.62
PCDH15-233ENST00000621708 PANK3Q9H999 370 aa11.19□□□□□ -0.62
PCDH15-233ENST00000621708 RPGRIP1LQ68CZ1 1315 aa11.19□□□□□ -0.62
PCDH15-233ENST00000621708 ANP32EQ9BTT0 268 aa11.19□□□□□ -0.62
PCDH15-233ENST00000621708 OS9Q13438 667 aaPredicted RBP11.18□□□□□ -0.62
PCDH15-233ENST00000621708 GOLGA2Q08379 1002 aa11.18□□□□□ -0.62
PCDH15-233ENST00000621708 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
PCDH15-233ENST00000621708 NPHP1O15259 732 aa11.17□□□□□ -0.62
PCDH15-233ENST00000621708 CD109Q6YHK3 1445 aa11.17□□□□□ -0.62
PCDH15-233ENST00000621708 CAMSAP2Q08AD1 1489 aa11.17□□□□□ -0.62
PCDH15-233ENST00000621708 PLB1Q6P1J6 1458 aa11.16□□□□□ -0.62
PCDH15-233ENST00000621708 RCAN3Q9UKA8 241 aa11.16□□□□□ -0.62
PCDH15-233ENST00000621708 PTPN23Q9H3S7 1636 aa11.16□□□□□ -0.62
PCDH15-233ENST00000621708 STK31Q9BXU1 1019 aa11.16□□□□□ -0.62
PCDH15-233ENST00000621708 GOLGA6L22H0YM25 854 aa11.15□□□□□ -0.62
PCDH15-233ENST00000621708 ARHGEF11O15085 1522 aa11.15□□□□□ -0.63
PCDH15-233ENST00000621708 NCLP19338 710 aaKnown RBP11.14□□□□□ -0.63
PCDH15-233ENST00000621708 MINK1Q8N4C8 1332 aaPredicted RBP11.14□□□□□ -0.63
PCDH15-233ENST00000621708 ANKRD30BQ9BXX2 1392 aa11.14□□□□□ -0.63
PCDH15-233ENST00000621708 ADAMTS12P58397 1594 aa11.14□□□□□ -0.63
PCDH15-233ENST00000621708 CCDC7Q96M83 1385 aa11.14□□□□□ -0.63
PCDH15-233ENST00000621708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.14□□□□□ -0.63
PCDH15-233ENST00000621708 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
PCDH15-233ENST00000621708 THEMISQ8N1K5 641 aaPredicted RBP11.13□□□□□ -0.63
PCDH15-233ENST00000621708 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
PCDH15-233ENST00000621708 WDR62O43379 1518 aa11.13□□□□□ -0.63
PCDH15-233ENST00000621708 ADGRL1O94910 1474 aa11.13□□□□□ -0.63
PCDH15-233ENST00000621708 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
PCDH15-233ENST00000621708 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
PCDH15-233ENST00000621708 RWDD1Q9H446 243 aaPredicted RBP11.12□□□□□ -0.63
PCDH15-233ENST00000621708 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
PCDH15-233ENST00000621708 AKNAQ7Z591 1439 aa11.12□□□□□ -0.63
PCDH15-233ENST00000621708 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 CNTLNQ9NXG0 1405 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 WASHC2AQ641Q2 1341 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 NAIPQ13075 1403 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 MCCP23508 829 aa11.1□□□□□ -0.63
PCDH15-233ENST00000621708 HMMRO75330 724 aa11.09□□□□□ -0.63
PCDH15-233ENST00000621708 ABCC5O15440 1437 aa11.09□□□□□ -0.63
PCDH15-233ENST00000621708 E9PSI1 815 aa11.09□□□□□ -0.63
PCDH15-233ENST00000621708 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
PCDH15-233ENST00000621708 DENND4BO75064 1496 aaPredicted RBP11.08□□□□□ -0.64
PCDH15-233ENST00000621708 DIAPH1O60610 1272 aaKnown RBP11.08□□□□□ -0.64
PCDH15-233ENST00000621708 ATF3P18847 181 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 RGS3P49796 1198 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 SMC4Q9NTJ3 1288 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 KIF7Q2M1P5 1343 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 KIF21AQ7Z4S6 1674 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 PSME1Q06323 249 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
PCDH15-233ENST00000621708 ZBED9Q6R2W3 1325 aa11.07□□□□□ -0.64
PCDH15-233ENST00000621708 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
PCDH15-233ENST00000621708 ITPRIPQ8IWB1 547 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 ERBINQ96RT1 1412 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 CCDC9Q9Y3X0 531 aaKnown RBP11.06□□□□□ -0.64
PCDH15-233ENST00000621708 FANCAO15360 1455 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 KIAA0556O60303 1618 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 RAPGEF3O95398 923 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 KCNJ4P48050 445 aa11.05□□□□□ -0.64
PCDH15-233ENST00000621708 BRD4O60885 1362 aaPredicted RBP11.05□□□□□ -0.64
PCDH15-233ENST00000621708 GPRASP1Q5JY77 1395 aa11.05□□□□□ -0.64
PCDH15-233ENST00000621708 EIF4G3O43432 1585 aaKnown RBP11.05□□□□□ -0.64
PCDH15-233ENST00000621708 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
PCDH15-233ENST00000621708 GPATCH3Q96I76 525 aa11.04□□□□□ -0.64
PCDH15-233ENST00000621708 CFAP70Q5T0N1 1121 aa11.04□□□□□ -0.64
PCDH15-233ENST00000621708 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
PCDH15-233ENST00000621708 NCOA1Q15788 1441 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms