RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
CYFIP1-211ENST00000619348 PANK1Q8TE04 598 aa17.02■□□□□ 0.32
CYFIP1-211ENST00000619348 DAPK1P53355 1430 aa17.02■□□□□ 0.31
CYFIP1-211ENST00000619348 NESP48681 1621 aa17.02■□□□□ 0.31
CYFIP1-211ENST00000619348 DENND4BO75064 1496 aaPredicted RBP17.01■□□□□ 0.31
CYFIP1-211ENST00000619348 ANKRD30AQ9BXX3 1397 aa17.01■□□□□ 0.31
CYFIP1-211ENST00000619348 L1TD1Q5T7N2 865 aaKnown RBP17.01■□□□□ 0.31
CYFIP1-211ENST00000619348 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
CYFIP1-211ENST00000619348 C8orf34Q49A92 452 aa17■□□□□ 0.31
CYFIP1-211ENST00000619348 GOLGA6L3A6NEY3 463 aa17■□□□□ 0.31
CYFIP1-211ENST00000619348 FAM43AQ8N2R8 423 aa17■□□□□ 0.31
CYFIP1-211ENST00000619348 ABCC5O15440 1437 aa16.99■□□□□ 0.31
CYFIP1-211ENST00000619348 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
CYFIP1-211ENST00000619348 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
CYFIP1-211ENST00000619348 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
CYFIP1-211ENST00000619348 MFAP1P55081 439 aaKnown RBP16.98■□□□□ 0.31
CYFIP1-211ENST00000619348 KIAA1107Q9UPP5 1409 aa16.98■□□□□ 0.31
CYFIP1-211ENST00000619348 TEX14Q8IWB6 1497 aa16.97■□□□□ 0.31
CYFIP1-211ENST00000619348 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
CYFIP1-211ENST00000619348 SEC24BO95487 1268 aa16.95■□□□□ 0.3
CYFIP1-211ENST00000619348 EPRSP07814 1512 aaKnown RBP16.95■□□□□ 0.3
CYFIP1-211ENST00000619348 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
CYFIP1-211ENST00000619348 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
CYFIP1-211ENST00000619348 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
CYFIP1-211ENST00000619348 ARID3AQ99856 593 aa16.94■□□□□ 0.3
CYFIP1-211ENST00000619348 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
CYFIP1-211ENST00000619348 HSP90AA2PQ14568 343 aaPredicted RBP16.94■□□□□ 0.3
CYFIP1-211ENST00000619348 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
CYFIP1-211ENST00000619348 ANKRD50Q9ULJ7 1429 aa16.94■□□□□ 0.3
CYFIP1-211ENST00000619348 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
CYFIP1-211ENST00000619348 IGHDP01880 384 aa16.93■□□□□ 0.3
CYFIP1-211ENST00000619348 DUSP27Q5VZP5 1158 aa16.93■□□□□ 0.3
CYFIP1-211ENST00000619348 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
CYFIP1-211ENST00000619348 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
CYFIP1-211ENST00000619348 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
CYFIP1-211ENST00000619348 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
CYFIP1-211ENST00000619348 PANK2Q9BZ23 570 aa16.91■□□□□ 0.3
CYFIP1-211ENST00000619348 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
CYFIP1-211ENST00000619348 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
CYFIP1-211ENST00000619348 PPP2R1AP30153 589 aa16.91■□□□□ 0.3
CYFIP1-211ENST00000619348 FTSJ3Q8IY81 847 aaKnown RBP16.9■□□□□ 0.3
CYFIP1-211ENST00000619348 PKNOX2Q96KN3 472 aa16.89■□□□□ 0.29
CYFIP1-211ENST00000619348 MYH16Q9H6N6 1097 aa16.89■□□□□ 0.29
CYFIP1-211ENST00000619348 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
CYFIP1-211ENST00000619348 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
CYFIP1-211ENST00000619348 ROCK1Q13464 1354 aa16.87■□□□□ 0.29
CYFIP1-211ENST00000619348 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
CYFIP1-211ENST00000619348 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
CYFIP1-211ENST00000619348 PER1O15534 1290 aaPredicted RBP16.86■□□□□ 0.29
CYFIP1-211ENST00000619348 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
CYFIP1-211ENST00000619348 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
CYFIP1-211ENST00000619348 HECW1Q76N89 1606 aa16.86■□□□□ 0.29
CYFIP1-211ENST00000619348 ANP32BQ92688 251 aaKnown RBP16.85■□□□□ 0.29
CYFIP1-211ENST00000619348 PLEKHH1Q9ULM0 1364 aa16.85■□□□□ 0.29
CYFIP1-211ENST00000619348 HSCBQ8IWL3 235 aa16.84■□□□□ 0.29
CYFIP1-211ENST00000619348 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
CYFIP1-211ENST00000619348 DISP3Q9P2K9 1392 aa16.84■□□□□ 0.29
CYFIP1-211ENST00000619348 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
CYFIP1-211ENST00000619348 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.29
CYFIP1-211ENST00000619348 SLFN5Q08AF3 891 aa16.83■□□□□ 0.29
CYFIP1-211ENST00000619348 PARD3Q8TEW0 1356 aa16.82■□□□□ 0.28
CYFIP1-211ENST00000619348 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
CYFIP1-211ENST00000619348 E9PSI1 815 aa16.82■□□□□ 0.28
CYFIP1-211ENST00000619348 TRAK2O60296 914 aa16.82■□□□□ 0.28
CYFIP1-211ENST00000619348 XRCC6P12956 609 aaKnown RBP eCLIP16.82■□□□□ 0.28
CYFIP1-211ENST00000619348 TBC1D2Q9BYX2 928 aa16.82■□□□□ 0.28
CYFIP1-211ENST00000619348 PDZRN3Q9UPQ7 1066 aa16.82■□□□□ 0.28
CYFIP1-211ENST00000619348 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
CYFIP1-211ENST00000619348 BCORL1Q5H9F3 1711 aa16.81■□□□□ 0.28
CYFIP1-211ENST00000619348 PZPP20742 1482 aa16.81■□□□□ 0.28
CYFIP1-211ENST00000619348 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
CYFIP1-211ENST00000619348 TCOF1Q13428 1488 aaKnown RBP16.81■□□□□ 0.28
CYFIP1-211ENST00000619348 TNNQ9UQP3 1299 aa16.8■□□□□ 0.28
CYFIP1-211ENST00000619348 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
CYFIP1-211ENST00000619348 PMFBP1Q8TBY8 1022 aa16.79■□□□□ 0.28
CYFIP1-211ENST00000619348 MCM4P33991 863 aa16.79■□□□□ 0.28
CYFIP1-211ENST00000619348 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
CYFIP1-211ENST00000619348 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
CYFIP1-211ENST00000619348 TPRNQ4KMQ1 711 aa16.78■□□□□ 0.28
CYFIP1-211ENST00000619348 ITPRIPQ8IWB1 547 aa16.78■□□□□ 0.28
CYFIP1-211ENST00000619348 MORC1Q86VD1 984 aa16.77■□□□□ 0.28
CYFIP1-211ENST00000619348 C22orf23Q9BZE7 217 aa16.77■□□□□ 0.27
CYFIP1-211ENST00000619348 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
CYFIP1-211ENST00000619348 ZMYND15Q9H091 742 aa16.76■□□□□ 0.27
CYFIP1-211ENST00000619348 CHMP5Q9NZZ3 219 aa16.75■□□□□ 0.27
CYFIP1-211ENST00000619348 CTTNBP2Q8WZ74 1663 aa16.74■□□□□ 0.27
CYFIP1-211ENST00000619348 TESK2Q96S53 571 aa16.74■□□□□ 0.27
CYFIP1-211ENST00000619348 CUL7Q14999 1698 aa16.74■□□□□ 0.27
CYFIP1-211ENST00000619348 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
CYFIP1-211ENST00000619348 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
CYFIP1-211ENST00000619348 CAMSAP2Q08AD1 1489 aa16.74■□□□□ 0.27
CYFIP1-211ENST00000619348 RALGAPBQ86X10 1494 aa16.74■□□□□ 0.27
CYFIP1-211ENST00000619348 ERBINQ96RT1 1412 aa16.74■□□□□ 0.27
CYFIP1-211ENST00000619348 SMC4Q9NTJ3 1288 aa16.73■□□□□ 0.27
CYFIP1-211ENST00000619348 PCDHB15Q9Y5E8 787 aa16.73■□□□□ 0.27
CYFIP1-211ENST00000619348 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
CYFIP1-211ENST00000619348 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
CYFIP1-211ENST00000619348 SAFB2Q14151 953 aaKnown RBP eCLIP16.71■□□□□ 0.27
CYFIP1-211ENST00000619348 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.26
CYFIP1-211ENST00000619348 ESPNB1AK53 854 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms