RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.46
CYFIP1-211ENST00000619348 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
CYFIP1-211ENST00000619348 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
CYFIP1-211ENST00000619348 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
CYFIP1-211ENST00000619348 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.1
CYFIP1-211ENST00000619348 HRCP23327 699 aa21.94■■□□□ 1.1
CYFIP1-211ENST00000619348 PPARGC1BQ86YN6 1023 aaKnown RBP21.9■■□□□ 1.1
CYFIP1-211ENST00000619348 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
CYFIP1-211ENST00000619348 LOC105371045A0A1W2PR82 267 aa21.38■■□□□ 1.01
CYFIP1-211ENST00000619348 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
CYFIP1-211ENST00000619348 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
CYFIP1-211ENST00000619348 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
CYFIP1-211ENST00000619348 TRIM26Q12899 539 aaPredicted RBP21.02■□□□□ 0.96
CYFIP1-211ENST00000619348 PELP1Q8IZL8 1130 aaKnown RBP20.97■□□□□ 0.95
CYFIP1-211ENST00000619348 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
CYFIP1-211ENST00000619348 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
CYFIP1-211ENST00000619348 TTBK1Q5TCY1 1321 aaPredicted RBP20.75■□□□□ 0.91
CYFIP1-211ENST00000619348 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
CYFIP1-211ENST00000619348 CCER1Q8TC90 406 aaPredicted RBP20.59■□□□□ 0.89
CYFIP1-211ENST00000619348 DCAF1Q9Y4B6 1507 aa20.57■□□□□ 0.88
CYFIP1-211ENST00000619348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.52■□□□□ 0.88
CYFIP1-211ENST00000619348 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
CYFIP1-211ENST00000619348 CENPBP07199 599 aaPredicted RBP20.42■□□□□ 0.86
CYFIP1-211ENST00000619348 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
CYFIP1-211ENST00000619348 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
CYFIP1-211ENST00000619348 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
CYFIP1-211ENST00000619348 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
CYFIP1-211ENST00000619348 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
CYFIP1-211ENST00000619348 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.82
CYFIP1-211ENST00000619348 MYT1Q01538 1121 aa20.07■□□□□ 0.8
CYFIP1-211ENST00000619348 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
CYFIP1-211ENST00000619348 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
CYFIP1-211ENST00000619348 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
CYFIP1-211ENST00000619348 ZNF316A6NFI3 1004 aaPredicted RBP19.78■□□□□ 0.76
CYFIP1-211ENST00000619348 MIER1Q8N108 512 aa19.71■□□□□ 0.75
CYFIP1-211ENST00000619348 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
CYFIP1-211ENST00000619348 APLP2Q06481 763 aa19.64■□□□□ 0.73
CYFIP1-211ENST00000619348 SCRIBQ14160 1630 aa19.52■□□□□ 0.71
CYFIP1-211ENST00000619348 BCANQ96GW7 911 aa19.5■□□□□ 0.71
CYFIP1-211ENST00000619348 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
CYFIP1-211ENST00000619348 ITGAEP38570 1179 aa19.37■□□□□ 0.69
CYFIP1-211ENST00000619348 ABCC9O60706 1549 aa19.3■□□□□ 0.68
CYFIP1-211ENST00000619348 CSRNP3Q8WYN3 585 aa19.29■□□□□ 0.68
CYFIP1-211ENST00000619348 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
CYFIP1-211ENST00000619348 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
CYFIP1-211ENST00000619348 SUPT16HQ9Y5B9 1047 aaKnown RBP19.23■□□□□ 0.67
CYFIP1-211ENST00000619348 NEFLP07196 543 aa19.16■□□□□ 0.66
CYFIP1-211ENST00000619348 SOGA1O94964 1423 aa19.11■□□□□ 0.65
CYFIP1-211ENST00000619348 FKBP8Q14318 412 aa19.11■□□□□ 0.65
CYFIP1-211ENST00000619348 ANP32EQ9BTT0 268 aa19.09■□□□□ 0.65
CYFIP1-211ENST00000619348 ERICH6Q7L0X2 663 aa19.08■□□□□ 0.64
CYFIP1-211ENST00000619348 TSHZ2Q9NRE2 1034 aa19.06■□□□□ 0.64
CYFIP1-211ENST00000619348 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
CYFIP1-211ENST00000619348 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
CYFIP1-211ENST00000619348 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
CYFIP1-211ENST00000619348 BCL11AQ9H165 835 aa19.02■□□□□ 0.64
CYFIP1-211ENST00000619348 ATP1B4Q9UN42 357 aaPredicted RBP19.01■□□□□ 0.63
CYFIP1-211ENST00000619348 KCNH8Q96L42 1107 aa19■□□□□ 0.63
CYFIP1-211ENST00000619348 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
CYFIP1-211ENST00000619348 TRIM52Q96A61 297 aa18.97■□□□□ 0.63
CYFIP1-211ENST00000619348 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
CYFIP1-211ENST00000619348 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
CYFIP1-211ENST00000619348 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
CYFIP1-211ENST00000619348 WIZO95785 1651 aa18.92■□□□□ 0.62
CYFIP1-211ENST00000619348 CLIP1P30622 1438 aa18.89■□□□□ 0.61
CYFIP1-211ENST00000619348 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
CYFIP1-211ENST00000619348 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
CYFIP1-211ENST00000619348 CLSPNQ9HAW4 1339 aa18.87■□□□□ 0.61
CYFIP1-211ENST00000619348 IRX6P78412 446 aaPredicted RBP18.83■□□□□ 0.61
CYFIP1-211ENST00000619348 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
CYFIP1-211ENST00000619348 CNGB1Q14028 1251 aaPredicted RBP18.78■□□□□ 0.6
CYFIP1-211ENST00000619348 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
CYFIP1-211ENST00000619348 RBM19Q9Y4C8 960 aaKnown RBP18.76■□□□□ 0.59
CYFIP1-211ENST00000619348 ANP32CO43423 234 aa18.72■□□□□ 0.59
CYFIP1-211ENST00000619348 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
CYFIP1-211ENST00000619348 SIN3AQ96ST3 1273 aa18.68■□□□□ 0.58
CYFIP1-211ENST00000619348 EEA1Q15075 1411 aa18.66■□□□□ 0.58
CYFIP1-211ENST00000619348 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
CYFIP1-211ENST00000619348 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
CYFIP1-211ENST00000619348 HNRNPUQ00839 825 aaKnown RBP eCLIP18.62■□□□□ 0.57
CYFIP1-211ENST00000619348 VPS8Q8N3P4 1428 aa18.62■□□□□ 0.57
CYFIP1-211ENST00000619348 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
CYFIP1-211ENST00000619348 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
CYFIP1-211ENST00000619348 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
CYFIP1-211ENST00000619348 NBR1Q14596 966 aa18.54■□□□□ 0.56
CYFIP1-211ENST00000619348 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
CYFIP1-211ENST00000619348 POLR3GLQ9BT43 218 aa18.49■□□□□ 0.55
CYFIP1-211ENST00000619348 SENP3-EIF4A1A0A087X0R7 540 aa18.47■□□□□ 0.55
CYFIP1-211ENST00000619348 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
CYFIP1-211ENST00000619348 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
CYFIP1-211ENST00000619348 NACADO15069 1562 aa18.41■□□□□ 0.54
CYFIP1-211ENST00000619348 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
CYFIP1-211ENST00000619348 RAB3GAP2Q9H2M9 1393 aa18.4■□□□□ 0.54
CYFIP1-211ENST00000619348 MSH5O43196 834 aa18.38■□□□□ 0.53
CYFIP1-211ENST00000619348 B4GALNT3Q6L9W6 998 aa18.37■□□□□ 0.53
CYFIP1-211ENST00000619348 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
CYFIP1-211ENST00000619348 TONSLQ96HA7 1378 aa18.35■□□□□ 0.53
CYFIP1-211ENST00000619348 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
CYFIP1-211ENST00000619348 DEKP35659 375 aaKnown RBP18.32■□□□□ 0.52
CYFIP1-211ENST00000619348 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms