RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 PRAG1Q86YV5 1406 aa10.86□□□□□ -0.67
CHD7-212ENST00000618450 C9orf84Q5VXU9 1444 aa10.85□□□□□ -0.67
CHD7-212ENST00000618450 BLMP54132 1417 aaPredicted RBP10.85□□□□□ -0.67
CHD7-212ENST00000618450 BRD4O60885 1362 aaPredicted RBP10.85□□□□□ -0.67
CHD7-212ENST00000618450 IQGAP1P46940 1657 aa10.85□□□□□ -0.67
CHD7-212ENST00000618450 MYOM1P52179 1685 aa10.84□□□□□ -0.67
CHD7-212ENST00000618450 COL17A1Q9UMD9 1497 aaPredicted RBP10.84□□□□□ -0.67
CHD7-212ENST00000618450 SHROOM2Q13796 1616 aa10.83□□□□□ -0.68
CHD7-212ENST00000618450 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
CHD7-212ENST00000618450 A2MP01023 1474 aa10.82□□□□□ -0.68
CHD7-212ENST00000618450 KIF15Q9NS87 1388 aa10.82□□□□□ -0.68
CHD7-212ENST00000618450 PKD2Q13563 968 aa10.81□□□□□ -0.68
CHD7-212ENST00000618450 TTC37Q6PGP7 1564 aa10.81□□□□□ -0.68
CHD7-212ENST00000618450 MADDQ8WXG6 1647 aa10.79□□□□□ -0.68
CHD7-212ENST00000618450 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
CHD7-212ENST00000618450 TESK2Q96S53 571 aa10.79□□□□□ -0.68
CHD7-212ENST00000618450 VIRMAQ69YN4 1812 aaKnown RBP10.78□□□□□ -0.68
CHD7-212ENST00000618450 CCDC141Q6ZP82 1450 aa10.78□□□□□ -0.68
CHD7-212ENST00000618450 SPHKAPQ2M3C7 1700 aa10.78□□□□□ -0.68
CHD7-212ENST00000618450 MYBBP1AQ9BQG0 1328 aaKnown RBP10.78□□□□□ -0.68
CHD7-212ENST00000618450 EIF2AK4Q9P2K8 1649 aaKnown RBP10.78□□□□□ -0.68
CHD7-212ENST00000618450 DEPDC5O75140 1603 aa10.77□□□□□ -0.68
CHD7-212ENST00000618450 CFDP1Q9UEE9 299 aaPredicted RBP10.77□□□□□ -0.68
CHD7-212ENST00000618450 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHD7-212ENST00000618450 WDR7Q9Y4E6 1490 aa10.77□□□□□ -0.69
CHD7-212ENST00000618450 CEP152O94986 1710 aa10.76□□□□□ -0.69
CHD7-212ENST00000618450 ARID3CA6NKF2 412 aa10.76□□□□□ -0.69
CHD7-212ENST00000618450 NOP58Q9Y2X3 529 aaKnown RBP10.76□□□□□ -0.69
CHD7-212ENST00000618450 ST20-MTHFSA0A0A6YYL1 179 aa10.76□□□□□ -0.69
CHD7-212ENST00000618450 IPO9Q96P70 1041 aaKnown RBP10.75□□□□□ -0.69
CHD7-212ENST00000618450 NEURL4Q96JN8 1562 aa10.75□□□□□ -0.69
CHD7-212ENST00000618450 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
CHD7-212ENST00000618450 SENP3Q9H4L4 574 aaPredicted RBP10.75□□□□□ -0.69
CHD7-212ENST00000618450 NUP155O75694 1391 aa10.75□□□□□ -0.69
CHD7-212ENST00000618450 RRP1P56182 461 aaKnown RBP10.74□□□□□ -0.69
CHD7-212ENST00000618450 DISP3Q9P2K9 1392 aa10.74□□□□□ -0.69
CHD7-212ENST00000618450 SYCP2Q9BX26 1530 aa10.74□□□□□ -0.69
CHD7-212ENST00000618450 RALBP1Q15311 655 aa10.74□□□□□ -0.69
CHD7-212ENST00000618450 IFT172Q9UG01 1749 aa10.74□□□□□ -0.69
CHD7-212ENST00000618450 KIAA1210Q9ULL0 1709 aa10.74□□□□□ -0.69
CHD7-212ENST00000618450 ZNF521Q96K83 1311 aa10.73□□□□□ -0.69
CHD7-212ENST00000618450 DEKP35659 375 aaKnown RBP10.73□□□□□ -0.69
CHD7-212ENST00000618450 VWDEQ8N2E2 1590 aa10.72□□□□□ -0.69
CHD7-212ENST00000618450 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
CHD7-212ENST00000618450 ABCC2Q92887 1545 aa10.72□□□□□ -0.69
CHD7-212ENST00000618450 SYNMO15061 1565 aa10.72□□□□□ -0.69
CHD7-212ENST00000618450 PLEKHH2Q8IVE3 1493 aa10.72□□□□□ -0.69
CHD7-212ENST00000618450 KDM2BQ8NHM5 1336 aa10.71□□□□□ -0.7
CHD7-212ENST00000618450 CARMIL2Q6F5E8 1435 aa10.71□□□□□ -0.7
CHD7-212ENST00000618450 JPH4Q96JJ6 628 aa10.7□□□□□ -0.7
CHD7-212ENST00000618450 BACH2Q9BYV9 841 aa10.7□□□□□ -0.7
CHD7-212ENST00000618450 DUOX2Q9NRD8 1548 aa10.7□□□□□ -0.7
CHD7-212ENST00000618450 EXOC6Q8TAG9 804 aa10.69□□□□□ -0.7
CHD7-212ENST00000618450 CARD11Q9BXL7 1154 aa10.69□□□□□ -0.7
CHD7-212ENST00000618450 CHD1O14646 1710 aa10.69□□□□□ -0.7
CHD7-212ENST00000618450 MYO3AQ8NEV4 1616 aa10.69□□□□□ -0.7
CHD7-212ENST00000618450 NBPF1Q3BBV0 1214 aa10.69□□□□□ -0.7
CHD7-212ENST00000618450 PDE3BQ13370 1112 aa10.68□□□□□ -0.7
CHD7-212ENST00000618450 TRPM2O94759 1503 aa10.68□□□□□ -0.7
CHD7-212ENST00000618450 SHPRHQ149N8 1683 aa10.68□□□□□ -0.7
CHD7-212ENST00000618450 NLRP13Q86W25 1043 aa10.67□□□□□ -0.7
CHD7-212ENST00000618450 CLTCL1P53675 1640 aa10.67□□□□□ -0.7
CHD7-212ENST00000618450 MROH1Q8NDA8 1641 aa10.67□□□□□ -0.7
CHD7-212ENST00000618450 PTPRTO14522 1441 aa10.67□□□□□ -0.7
CHD7-212ENST00000618450 ERBINQ96RT1 1412 aa10.67□□□□□ -0.7
CHD7-212ENST00000618450 PHF23Q9BUL5 403 aaPredicted RBP10.67□□□□□ -0.7
CHD7-212ENST00000618450 ZC3H13Q5T200 1668 aaKnown RBP10.67□□□□□ -0.7
CHD7-212ENST00000618450 ABCC1P33527 1531 aa10.67□□□□□ -0.7
CHD7-212ENST00000618450 TRMT2AQ8IZ69 625 aaKnown RBP10.66□□□□□ -0.7
CHD7-212ENST00000618450 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
CHD7-212ENST00000618450 CCDC136Q96JN2 1154 aa10.66□□□□□ -0.7
CHD7-212ENST00000618450 MS4A1P11836 297 aa10.66□□□□□ -0.7
CHD7-212ENST00000618450 ERCC6L2Q5T890 1561 aa10.66□□□□□ -0.7
CHD7-212ENST00000618450 SCAPERQ9BY12 1400 aa10.65□□□□□ -0.7
CHD7-212ENST00000618450 RCAN3Q9UKA8 241 aa10.65□□□□□ -0.7
CHD7-212ENST00000618450 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
CHD7-212ENST00000618450 PLEKHH1Q9ULM0 1364 aa10.65□□□□□ -0.7
CHD7-212ENST00000618450 TCERG1O14776 1098 aaKnown RBP10.65□□□□□ -0.71
CHD7-212ENST00000618450 HNRNPMP52272 730 aaKnown RBP eCLIP10.65□□□□□ -0.71
CHD7-212ENST00000618450 TMC1Q8TDI8 760 aa10.65□□□□□ -0.71
CHD7-212ENST00000618450 DCAF11Q8TEB1 546 aa10.65□□□□□ -0.71
CHD7-212ENST00000618450 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
CHD7-212ENST00000618450 PDE4AP27815 886 aa10.63□□□□□ -0.71
CHD7-212ENST00000618450 ZCCHC11Q5TAX3 1644 aaKnown RBP10.63□□□□□ -0.71
CHD7-212ENST00000618450 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
CHD7-212ENST00000618450 TET3O43151 1660 aa10.63□□□□□ -0.71
CHD7-212ENST00000618450 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
CHD7-212ENST00000618450 INO80Q9ULG1 1556 aaPredicted RBP10.62□□□□□ -0.71
CHD7-212ENST00000618450 NRXN1Q9ULB1 1477 aa10.62□□□□□ -0.71
CHD7-212ENST00000618450 ARAP3Q8WWN8 1544 aa10.62□□□□□ -0.71
CHD7-212ENST00000618450 PIK3C2GO75747 1445 aa10.62□□□□□ -0.71
CHD7-212ENST00000618450 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
CHD7-212ENST00000618450 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
CHD7-212ENST00000618450 RSPH4AQ5TD94 716 aa10.61□□□□□ -0.71
CHD7-212ENST00000618450 NLRP1Q9C000 1473 aa10.61□□□□□ -0.71
CHD7-212ENST00000618450 DUSP27Q5VZP5 1158 aa10.61□□□□□ -0.71
CHD7-212ENST00000618450 MROH2AA6NES4 1674 aa10.61□□□□□ -0.71
CHD7-212ENST00000618450 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
CHD7-212ENST00000618450 ABCA6Q8N139 1617 aa10.6□□□□□ -0.71
CHD7-212ENST00000618450 KDM5AP29375 1690 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms