RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
CLPX-206ENST00000560166 A0A0G2JS52 829 aa10.47□□□□□ -0.73
CLPX-206ENST00000560166 VPS9D1Q9Y2B5 631 aa10.47□□□□□ -0.73
CLPX-206ENST00000560166 STK25O00506 426 aa10.43□□□□□ -0.74
CLPX-206ENST00000560166 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
CLPX-206ENST00000560166 FOXK1P85037 733 aa10.42□□□□□ -0.74
CLPX-206ENST00000560166 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
CLPX-206ENST00000560166 SLC4A5Q9BY07 1137 aa10.42□□□□□ -0.74
CLPX-206ENST00000560166 THSD4Q6ZMP0 1018 aa10.41□□□□□ -0.74
CLPX-206ENST00000560166 KCNH8Q96L42 1107 aa10.41□□□□□ -0.74
CLPX-206ENST00000560166 ARAP1Q96P48 1450 aa10.41□□□□□ -0.74
CLPX-206ENST00000560166 BHMG1C9JSJ3 638 aaPredicted RBP10.4□□□□□ -0.74
CLPX-206ENST00000560166 TBC1D12O60347 775 aa10.39□□□□□ -0.75
CLPX-206ENST00000560166 PPP1R37O75864 691 aa10.39□□□□□ -0.75
CLPX-206ENST00000560166 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
CLPX-206ENST00000560166 PLPP6Q8IY26 295 aa10.38□□□□□ -0.75
CLPX-206ENST00000560166 BBXQ8WY36 941 aaPredicted RBP10.38□□□□□ -0.75
CLPX-206ENST00000560166 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
CLPX-206ENST00000560166 RGL2O15211 777 aa10.37□□□□□ -0.75
CLPX-206ENST00000560166 WRNQ14191 1432 aaPredicted RBP eCLIP10.35□□□□□ -0.75
CLPX-206ENST00000560166 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
CLPX-206ENST00000560166 PRDM2Q13029 1718 aa10.35□□□□□ -0.75
CLPX-206ENST00000560166 IFT140Q96RY7 1462 aa10.35□□□□□ -0.75
CLPX-206ENST00000560166 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
CLPX-206ENST00000560166 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
CLPX-206ENST00000560166 BCL2L12Q9HB09 334 aa10.33□□□□□ -0.76
CLPX-206ENST00000560166 WNT2BQ93097 391 aa10.32□□□□□ -0.76
CLPX-206ENST00000560166 CFAP44Q96MT7 982 aa10.32□□□□□ -0.76
CLPX-206ENST00000560166 CHD1O14646 1710 aa10.31□□□□□ -0.76
CLPX-206ENST00000560166 EIF4G3O43432 1585 aaKnown RBP10.31□□□□□ -0.76
CLPX-206ENST00000560166 DSG2Q14126 1118 aa10.3□□□□□ -0.76
CLPX-206ENST00000560166 BCANQ96GW7 911 aa10.3□□□□□ -0.76
CLPX-206ENST00000560166 GOLGA8CPA6NN73 597 aa10.29□□□□□ -0.76
CLPX-206ENST00000560166 Q6ZNB5 142 aa10.29□□□□□ -0.76
CLPX-206ENST00000560166 ZBED2Q9BTP6 218 aa10.29□□□□□ -0.76
CLPX-206ENST00000560166 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
CLPX-206ENST00000560166 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
CLPX-206ENST00000560166 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
CLPX-206ENST00000560166 OXER1Q8TDS5 423 aa10.27□□□□□ -0.77
CLPX-206ENST00000560166 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
CLPX-206ENST00000560166 ZNF454Q8N9F8 522 aa10.26□□□□□ -0.77
CLPX-206ENST00000560166 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
CLPX-206ENST00000560166 AQRO60306 1485 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLPX-206ENST00000560166 PTPREP23469 700 aa10.25□□□□□ -0.77
CLPX-206ENST00000560166 KDM2AQ9Y2K7 1162 aa10.25□□□□□ -0.77
CLPX-206ENST00000560166 SYNJ1O43426 1573 aa10.25□□□□□ -0.77
CLPX-206ENST00000560166 CUX1P39880 1505 aa10.24□□□□□ -0.77
CLPX-206ENST00000560166 FOSBP53539 338 aa10.24□□□□□ -0.77
CLPX-206ENST00000560166 EEA1Q15075 1411 aa10.24□□□□□ -0.77
CLPX-206ENST00000560166 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
CLPX-206ENST00000560166 CHGAP10645 457 aaKnown RBP10.23□□□□□ -0.77
CLPX-206ENST00000560166 SPRYD3Q8NCJ5 442 aa10.23□□□□□ -0.77
CLPX-206ENST00000560166 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
CLPX-206ENST00000560166 NBPF3Q9H094 633 aa10.21□□□□□ -0.77
CLPX-206ENST00000560166 ANO8Q9HCE9 1232 aaPredicted RBP10.19□□□□□ -0.78
CLPX-206ENST00000560166 PRKCSHP14314 528 aaPredicted RBP10.18□□□□□ -0.78
CLPX-206ENST00000560166 LAPTM4AQ15012 233 aa10.17□□□□□ -0.78
CLPX-206ENST00000560166 CHMP7Q8WUX9 453 aaPredicted RBP10.17□□□□□ -0.78
CLPX-206ENST00000560166 LCE2BO14633 110 aa10.16□□□□□ -0.78
CLPX-206ENST00000560166 TSHZ2Q9NRE2 1034 aa10.16□□□□□ -0.78
CLPX-206ENST00000560166 FGD5Q6ZNL6 1462 aa10.16□□□□□ -0.78
CLPX-206ENST00000560166 UPF1Q92900 1129 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLPX-206ENST00000560166 CLASP1Q7Z460 1538 aa10.15□□□□□ -0.78
CLPX-206ENST00000560166 SNAPC4Q5SXM2 1469 aa10.15□□□□□ -0.78
CLPX-206ENST00000560166 JPH4Q96JJ6 628 aa10.14□□□□□ -0.79
CLPX-206ENST00000560166 ADAM33Q9BZ11 813 aa10.14□□□□□ -0.79
CLPX-206ENST00000560166 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
CLPX-206ENST00000560166 TARBP1Q13395 1621 aaKnown RBP10.14□□□□□ -0.79
CLPX-206ENST00000560166 GAPVD1Q14C86 1478 aa10.13□□□□□ -0.79
CLPX-206ENST00000560166 ANKK1Q8NFD2 765 aa10.13□□□□□ -0.79
CLPX-206ENST00000560166 ZDHHC16Q969W1 377 aa10.13□□□□□ -0.79
CLPX-206ENST00000560166 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
CLPX-206ENST00000560166 TRAF7Q6Q0C0 670 aa10.12□□□□□ -0.79
CLPX-206ENST00000560166 NYAP1Q6ZVC0 841 aa10.12□□□□□ -0.79
CLPX-206ENST00000560166 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
CLPX-206ENST00000560166 KIF27Q86VH2 1401 aa10.12□□□□□ -0.79
CLPX-206ENST00000560166 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
CLPX-206ENST00000560166 SOGA1O94964 1423 aa10.11□□□□□ -0.79
CLPX-206ENST00000560166 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
CLPX-206ENST00000560166 HS6ST3Q8IZP7 471 aa10.1□□□□□ -0.79
CLPX-206ENST00000560166 SOWAHBA6NEL2 793 aa10.09□□□□□ -0.79
CLPX-206ENST00000560166 KCNC4Q03721 635 aa10.09□□□□□ -0.79
CLPX-206ENST00000560166 CRISPLD2Q9H0B8 497 aa10.08□□□□□ -0.8
CLPX-206ENST00000560166 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
CLPX-206ENST00000560166 BCAMP50895 628 aa10.07□□□□□ -0.8
CLPX-206ENST00000560166 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
CLPX-206ENST00000560166 PPP1R3GB7ZBB8 358 aa10.06□□□□□ -0.8
CLPX-206ENST00000560166 EVI5O60447 810 aa10.06□□□□□ -0.8
CLPX-206ENST00000560166 GFRA3O60609 400 aa10.05□□□□□ -0.8
CLPX-206ENST00000560166 PPP1R15BQ5SWA1 713 aa10.05□□□□□ -0.8
CLPX-206ENST00000560166 MAGI1Q96QZ7 1491 aaPredicted RBP10.04□□□□□ -0.8
CLPX-206ENST00000560166 RUSC2Q8N2Y8 1516 aa10.04□□□□□ -0.8
CLPX-206ENST00000560166 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
CLPX-206ENST00000560166 TPRNQ4KMQ1 711 aa10.04□□□□□ -0.8
CLPX-206ENST00000560166 SYNJ2O15056 1496 aa10.04□□□□□ -0.8
CLPX-206ENST00000560166 WBP1LQ9NX94 342 aa10.03□□□□□ -0.8
CLPX-206ENST00000560166 KIF21BO75037 1637 aa10.03□□□□□ -0.8
CLPX-206ENST00000560166 PRXQ9BXM0 1461 aa10.03□□□□□ -0.8
CLPX-206ENST00000560166 ZFRQ96KR1 1074 aaKnown RBP10.02□□□□□ -0.81
CLPX-206ENST00000560166 GRIN2BQ13224 1484 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms