RNA–Protein interactions for RNA: ENST00000557887.1

LINC00933-201, long intergenic non-protein coding RNA 933, humanhuman

TSL 2 BASIC

Gene LINC00933, Length 2,606 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00933-201ENST00000557887 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.47□□□□□ -0.41
LINC00933-201ENST00000557887 C8orf34Q49A92 452 aa12.46□□□□□ -0.41
LINC00933-201ENST00000557887 GRPEL1Q9HAV7 217 aa12.46□□□□□ -0.41
LINC00933-201ENST00000557887 ARID3AQ99856 593 aa12.46□□□□□ -0.42
LINC00933-201ENST00000557887 GZF1Q9H116 711 aaPredicted RBP12.46□□□□□ -0.42
LINC00933-201ENST00000557887 FMN1Q68DA7 1419 aa12.46□□□□□ -0.42
LINC00933-201ENST00000557887 GTPBP4Q9BZE4 634 aaKnown RBP12.45□□□□□ -0.42
LINC00933-201ENST00000557887 POLA1P09884 1462 aaPredicted RBP12.45□□□□□ -0.42
LINC00933-201ENST00000557887 SNAPC4Q5SXM2 1469 aa12.45□□□□□ -0.42
LINC00933-201ENST00000557887 KDM5BQ9UGL1 1544 aa12.44□□□□□ -0.42
LINC00933-201ENST00000557887 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
LINC00933-201ENST00000557887 ARID3CA6NKF2 412 aa12.43□□□□□ -0.42
LINC00933-201ENST00000557887 CCDC94Q9BW85 323 aaPredicted RBP12.43□□□□□ -0.42
LINC00933-201ENST00000557887 MYOM3Q5VTT5 1437 aa12.43□□□□□ -0.42
LINC00933-201ENST00000557887 CTTNBP2Q8WZ74 1663 aa12.43□□□□□ -0.42
LINC00933-201ENST00000557887 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
LINC00933-201ENST00000557887 SLKQ9H2G2 1235 aaPredicted RBP12.42□□□□□ -0.42
LINC00933-201ENST00000557887 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
LINC00933-201ENST00000557887 VGFO15240 615 aaPredicted RBP12.41□□□□□ -0.42
LINC00933-201ENST00000557887 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
LINC00933-201ENST00000557887 LRRIQ1Q96JM4 1722 aa12.41□□□□□ -0.42
LINC00933-201ENST00000557887 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
LINC00933-201ENST00000557887 R3HCC1Q9Y3T6 440 aaKnown RBP12.41□□□□□ -0.42
LINC00933-201ENST00000557887 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00933-201ENST00000557887 NESP48681 1621 aa12.4□□□□□ -0.42
LINC00933-201ENST00000557887 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
LINC00933-201ENST00000557887 UQCRHLA0A096LP55 91 aa12.4□□□□□ -0.42
LINC00933-201ENST00000557887 UQCRHP07919 91 aa12.4□□□□□ -0.42
LINC00933-201ENST00000557887 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
LINC00933-201ENST00000557887 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
LINC00933-201ENST00000557887 TDRD9Q8NDG6 1382 aaKnown RBP12.4□□□□□ -0.42
LINC00933-201ENST00000557887 DYNC1I1O14576 645 aa12.4□□□□□ -0.43
LINC00933-201ENST00000557887 MCM4P33991 863 aa12.4□□□□□ -0.43
LINC00933-201ENST00000557887 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.43
LINC00933-201ENST00000557887 BECN1Q14457 450 aa12.39□□□□□ -0.43
LINC00933-201ENST00000557887 CDK11BP21127 795 aaKnown RBP12.39□□□□□ -0.43
LINC00933-201ENST00000557887 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
LINC00933-201ENST00000557887 TRAK2O60296 914 aa12.38□□□□□ -0.43
LINC00933-201ENST00000557887 CUL7Q14999 1698 aa12.38□□□□□ -0.43
LINC00933-201ENST00000557887 RGS22Q8NE09 1264 aa12.38□□□□□ -0.43
LINC00933-201ENST00000557887 L3MBTL2Q969R5 705 aa12.38□□□□□ -0.43
LINC00933-201ENST00000557887 SENP3-EIF4A1A0A087X0R7 540 aa12.37□□□□□ -0.43
LINC00933-201ENST00000557887 DNTTIP2Q5QJE6 756 aaKnown RBP12.37□□□□□ -0.43
LINC00933-201ENST00000557887 DENND4BO75064 1496 aaPredicted RBP12.36□□□□□ -0.43
LINC00933-201ENST00000557887 KDM6BO15054 1643 aa12.36□□□□□ -0.43
LINC00933-201ENST00000557887 ZBTB22O15209 634 aa12.36□□□□□ -0.43
LINC00933-201ENST00000557887 SUPT6HQ7KZ85 1726 aaKnown RBP12.36□□□□□ -0.43
LINC00933-201ENST00000557887 GRIN2BQ13224 1484 aa12.36□□□□□ -0.43
LINC00933-201ENST00000557887 IRX3P78415 501 aaPredicted RBP12.36□□□□□ -0.43
LINC00933-201ENST00000557887 CCDC7Q96M83 1385 aa12.35□□□□□ -0.43
LINC00933-201ENST00000557887 MAGI3Q5TCQ9 1506 aa12.35□□□□□ -0.43
LINC00933-201ENST00000557887 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
LINC00933-201ENST00000557887 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
LINC00933-201ENST00000557887 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
LINC00933-201ENST00000557887 MPHOSPH9Q99550 1183 aa12.35□□□□□ -0.43
LINC00933-201ENST00000557887 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
LINC00933-201ENST00000557887 USP19O94966 1318 aa12.34□□□□□ -0.43
LINC00933-201ENST00000557887 EHBP1L1Q8N3D4 1523 aa12.34□□□□□ -0.43
LINC00933-201ENST00000557887 CRBNQ96SW2 442 aa12.33□□□□□ -0.44
LINC00933-201ENST00000557887 CCDC173Q0VFZ6 552 aa12.33□□□□□ -0.44
LINC00933-201ENST00000557887 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
LINC00933-201ENST00000557887 SAMD9Q5K651 1589 aa12.33□□□□□ -0.44
LINC00933-201ENST00000557887 NCOA1Q15788 1441 aa12.32□□□□□ -0.44
LINC00933-201ENST00000557887 UGGT2Q9NYU1 1516 aa12.32□□□□□ -0.44
LINC00933-201ENST00000557887 CENPQQ7L2Z9 268 aaPredicted RBP12.32□□□□□ -0.44
LINC00933-201ENST00000557887 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
LINC00933-201ENST00000557887 NBPF8Q3BBV2 869 aa12.32□□□□□ -0.44
LINC00933-201ENST00000557887 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
LINC00933-201ENST00000557887 TMC1Q8TDI8 760 aa12.31□□□□□ -0.44
LINC00933-201ENST00000557887 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
LINC00933-201ENST00000557887 CBX1P83916 185 aa12.3□□□□□ -0.44
LINC00933-201ENST00000557887 GAS2L3Q86XJ1 694 aa12.3□□□□□ -0.44
LINC00933-201ENST00000557887 HECW1Q76N89 1606 aa12.3□□□□□ -0.44
LINC00933-201ENST00000557887 E9PSI1 815 aa12.29□□□□□ -0.44
LINC00933-201ENST00000557887 PNISRQ8TF01 805 aaKnown RBP12.29□□□□□ -0.44
LINC00933-201ENST00000557887 BCCIPQ9P287 314 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00933-201ENST00000557887 URB2Q14146 1524 aaKnown RBP12.29□□□□□ -0.44
LINC00933-201ENST00000557887 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
LINC00933-201ENST00000557887 PLIN1O60240 522 aa12.28□□□□□ -0.44
LINC00933-201ENST00000557887 ZNF500O60304 480 aaPredicted RBP12.28□□□□□ -0.44
LINC00933-201ENST00000557887 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
LINC00933-201ENST00000557887 SENP3Q9H4L4 574 aaPredicted RBP12.28□□□□□ -0.44
LINC00933-201ENST00000557887 KIF7Q2M1P5 1343 aa12.28□□□□□ -0.44
LINC00933-201ENST00000557887 GCC2Q8IWJ2 1684 aa12.28□□□□□ -0.44
LINC00933-201ENST00000557887 SLC20A2Q08357 652 aa12.28□□□□□ -0.44
LINC00933-201ENST00000557887 CDK13Q14004 1512 aaKnown RBP12.28□□□□□ -0.44
LINC00933-201ENST00000557887 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
LINC00933-201ENST00000557887 SASS6Q6UVJ0 657 aa12.27□□□□□ -0.45
LINC00933-201ENST00000557887 ARHGEF11O15085 1522 aa12.26□□□□□ -0.45
LINC00933-201ENST00000557887 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
LINC00933-201ENST00000557887 TCOF1Q13428 1488 aaKnown RBP12.26□□□□□ -0.45
LINC00933-201ENST00000557887 XPCQ01831 940 aaPredicted RBP12.25□□□□□ -0.45
LINC00933-201ENST00000557887 DDX11L8A8MPP1 907 aa12.25□□□□□ -0.45
LINC00933-201ENST00000557887 DNAJC2Q99543 621 aaKnown RBP12.25□□□□□ -0.45
LINC00933-201ENST00000557887 CSPP1Q1MSJ5 1256 aa12.24□□□□□ -0.45
LINC00933-201ENST00000557887 HS1BP3Q53T59 392 aa12.24□□□□□ -0.45
LINC00933-201ENST00000557887 CERS3Q8IU89 383 aa12.24□□□□□ -0.45
LINC00933-201ENST00000557887 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
LINC00933-201ENST00000557887 TBC1D2Q9BYX2 928 aa12.24□□□□□ -0.45
LINC00933-201ENST00000557887 ABCA5Q8WWZ7 1642 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms