RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TK2O00142 265 aa9.17□□□□□ -0.94
ATXN3-239ENST00000556315 IFT140Q96RY7 1462 aa9.16□□□□□ -0.94
ATXN3-239ENST00000556315 PSEN2P49810 448 aa9.16□□□□□ -0.94
ATXN3-239ENST00000556315 DMRTA1Q5VZB9 504 aa9.16□□□□□ -0.94
ATXN3-239ENST00000556315 WIZO95785 1651 aa9.16□□□□□ -0.94
ATXN3-239ENST00000556315 UPF1Q92900 1129 aaKnown RBP eCLIP9.15□□□□□ -0.94
ATXN3-239ENST00000556315 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
ATXN3-239ENST00000556315 HRO43593 1189 aa9.14□□□□□ -0.95
ATXN3-239ENST00000556315 MFSD10Q14728 455 aa9.13□□□□□ -0.95
ATXN3-239ENST00000556315 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-239ENST00000556315 RSF1Q96T23 1441 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-239ENST00000556315 LARP6Q9BRS8 491 aaKnown RBP9.12□□□□□ -0.95
ATXN3-239ENST00000556315 DDX27Q96GQ7 796 aaKnown RBP9.11□□□□□ -0.95
ATXN3-239ENST00000556315 FOSBP53539 338 aa9.1□□□□□ -0.95
ATXN3-239ENST00000556315 ZNF454Q8N9F8 522 aa9.09□□□□□ -0.95
ATXN3-239ENST00000556315 BCL2L12Q9HB09 334 aa9.09□□□□□ -0.95
ATXN3-239ENST00000556315 KCNK17Q96T54 332 aa9.08□□□□□ -0.96
ATXN3-239ENST00000556315 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.96
ATXN3-239ENST00000556315 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
ATXN3-239ENST00000556315 TOP2AP11388 1531 aaKnown RBP9.07□□□□□ -0.96
ATXN3-239ENST00000556315 EVI5O60447 810 aa9.07□□□□□ -0.96
ATXN3-239ENST00000556315 KCNH8Q96L42 1107 aa9.07□□□□□ -0.96
ATXN3-239ENST00000556315 SLC4A5Q9BY07 1137 aa9.07□□□□□ -0.96
ATXN3-239ENST00000556315 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
ATXN3-239ENST00000556315 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
ATXN3-239ENST00000556315 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
ATXN3-239ENST00000556315 CADPS2Q86UW7 1296 aa9.06□□□□□ -0.96
ATXN3-239ENST00000556315 JPH4Q96JJ6 628 aa9.06□□□□□ -0.96
ATXN3-239ENST00000556315 VPS9D1Q9Y2B5 631 aa9.06□□□□□ -0.96
ATXN3-239ENST00000556315 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
ATXN3-239ENST00000556315 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-239ENST00000556315 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
ATXN3-239ENST00000556315 MAP3K9P80192 1104 aa9.03□□□□□ -0.96
ATXN3-239ENST00000556315 PTPREP23469 700 aa9.02□□□□□ -0.97
ATXN3-239ENST00000556315 ZDHHC16Q969W1 377 aa9.02□□□□□ -0.97
ATXN3-239ENST00000556315 SLC24A1O60721 1099 aa9.01□□□□□ -0.97
ATXN3-239ENST00000556315 BHMG1C9JSJ3 638 aaPredicted RBP9□□□□□ -0.97
ATXN3-239ENST00000556315 STAC3Q96MF2 364 aa9□□□□□ -0.97
ATXN3-239ENST00000556315 ZBED2Q9BTP6 218 aa9□□□□□ -0.97
ATXN3-239ENST00000556315 ADAM33Q9BZ11 813 aa9□□□□□ -0.97
ATXN3-239ENST00000556315 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
ATXN3-239ENST00000556315 CAMK2BQ13554 666 aa8.99□□□□□ -0.97
ATXN3-239ENST00000556315 BBXQ8WY36 941 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-239ENST00000556315 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
ATXN3-239ENST00000556315 PLA2G2EQ9NZK7 142 aa8.99□□□□□ -0.97
ATXN3-239ENST00000556315 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
ATXN3-239ENST00000556315 SOGA1O94964 1423 aa8.98□□□□□ -0.97
ATXN3-239ENST00000556315 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-239ENST00000556315 PCDHGA10Q9Y5H3 936 aa8.97□□□□□ -0.97
ATXN3-239ENST00000556315 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
ATXN3-239ENST00000556315 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-239ENST00000556315 RAD54L2Q9Y4B4 1467 aa8.95□□□□□ -0.98
ATXN3-239ENST00000556315 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
ATXN3-239ENST00000556315 PHF14O94880 888 aa8.94□□□□□ -0.98
ATXN3-239ENST00000556315 PLCB2Q00722 1185 aa8.94□□□□□ -0.98
ATXN3-239ENST00000556315 PPP1R3GB7ZBB8 358 aa8.93□□□□□ -0.98
ATXN3-239ENST00000556315 TYW1BQ6NUM6 668 aa8.93□□□□□ -0.98
ATXN3-239ENST00000556315 FBXW7Q969H0 707 aa8.93□□□□□ -0.98
ATXN3-239ENST00000556315 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
ATXN3-239ENST00000556315 THSD4Q6ZMP0 1018 aa8.91□□□□□ -0.98
ATXN3-239ENST00000556315 MRPL50Q8N5N7 158 aaKnown RBP8.91□□□□□ -0.98
ATXN3-239ENST00000556315 CHD1O14646 1710 aa8.91□□□□□ -0.98
ATXN3-239ENST00000556315 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-239ENST00000556315 DPYSL4O14531 572 aa8.9□□□□□ -0.98
ATXN3-239ENST00000556315 COL9A1P20849 921 aa8.9□□□□□ -0.98
ATXN3-239ENST00000556315 NBPF3Q9H094 633 aa8.9□□□□□ -0.98
ATXN3-239ENST00000556315 CLASP1Q7Z460 1538 aa8.9□□□□□ -0.99
ATXN3-239ENST00000556315 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
ATXN3-239ENST00000556315 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
ATXN3-239ENST00000556315 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
ATXN3-239ENST00000556315 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
ATXN3-239ENST00000556315 PTPN5P54829 565 aa8.88□□□□□ -0.99
ATXN3-239ENST00000556315 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
ATXN3-239ENST00000556315 WNT2BQ93097 391 aa8.88□□□□□ -0.99
ATXN3-239ENST00000556315 EPAS1Q99814 870 aa8.88□□□□□ -0.99
ATXN3-239ENST00000556315 RABGEF1Q9UJ41 708 aa8.88□□□□□ -0.99
ATXN3-239ENST00000556315 PRDM2Q13029 1718 aa8.88□□□□□ -0.99
ATXN3-239ENST00000556315 GOLGA8CPA6NN73 597 aa8.87□□□□□ -0.99
ATXN3-239ENST00000556315 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
ATXN3-239ENST00000556315 FGD5Q6ZNL6 1462 aa8.86□□□□□ -0.99
ATXN3-239ENST00000556315 PAXIP1Q6ZW49 1069 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-239ENST00000556315 ONECUT3O60422 494 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-239ENST00000556315 C6orf132Q5T0Z8 1188 aa8.85□□□□□ -0.99
ATXN3-239ENST00000556315 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
ATXN3-239ENST00000556315 CFAP44Q96MT7 982 aa8.85□□□□□ -0.99
ATXN3-239ENST00000556315 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
ATXN3-239ENST00000556315 PDIA6Q15084 440 aa8.83□□□□□ -1
ATXN3-239ENST00000556315 HAP1P54257 671 aaPredicted RBP8.82□□□□□ -1
ATXN3-239ENST00000556315 LAPTM4BQ86VI4 370 aa8.82□□□□□ -1
ATXN3-239ENST00000556315 DDX12PQ92771 950 aa8.81□□□□□ -1
ATXN3-239ENST00000556315 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
ATXN3-239ENST00000556315 ARIH1Q9Y4X5 557 aaPredicted RBP8.81□□□□□ -1
ATXN3-239ENST00000556315 SPDYE16A6NNV3 312 aaPredicted RBP8.8□□□□□ -1
ATXN3-239ENST00000556315 TRIM6-TRIM34B2RNG4 842 aa8.79□□□□□ -1
ATXN3-239ENST00000556315 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ATXN3-239ENST00000556315 ANKK1Q8NFD2 765 aa8.79□□□□□ -1
ATXN3-239ENST00000556315 CUX1P39880 1505 aa8.79□□□□□ -1
ATXN3-239ENST00000556315 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
ATXN3-239ENST00000556315 E2F4Q16254 413 aa8.78□□□□□ -1
ATXN3-239ENST00000556315 RBM33Q96EV2 1170 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms