RNA–Protein interactions for RNA: ENST00000555381.5

ATXN3-232, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-232ENST00000555381 IRX2Q9BZI1 471 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-232ENST00000555381 GPHNQ9NQX3 736 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-232ENST00000555381 KDM4FA0A1W2PPD8 638 aa9.13□□□□□ -0.95
ATXN3-232ENST00000555381 TK2O00142 265 aa9.13□□□□□ -0.95
ATXN3-232ENST00000555381 RSF1Q96T23 1441 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-232ENST00000555381 TBC1D12O60347 775 aa9.12□□□□□ -0.95
ATXN3-232ENST00000555381 DSG2Q14126 1118 aa9.12□□□□□ -0.95
ATXN3-232ENST00000555381 PTPN5P54829 565 aa9.11□□□□□ -0.95
ATXN3-232ENST00000555381 PPP4R3BQ5MIZ7 849 aa9.11□□□□□ -0.95
ATXN3-232ENST00000555381 STAC3Q96MF2 364 aa9.1□□□□□ -0.95
ATXN3-232ENST00000555381 AQRO60306 1485 aaKnown RBP eCLIP9.08□□□□□ -0.96
ATXN3-232ENST00000555381 ABCC8Q09428 1581 aa9.07□□□□□ -0.96
ATXN3-232ENST00000555381 TOP2AP11388 1531 aaKnown RBP9.07□□□□□ -0.96
ATXN3-232ENST00000555381 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
ATXN3-232ENST00000555381 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
ATXN3-232ENST00000555381 KCNH8Q96L42 1107 aa9.06□□□□□ -0.96
ATXN3-232ENST00000555381 KCNK17Q96T54 332 aa9.06□□□□□ -0.96
ATXN3-232ENST00000555381 UPF1Q92900 1129 aaKnown RBP eCLIP9.05□□□□□ -0.96
ATXN3-232ENST00000555381 RYDENQ9NUL5 291 aaKnown RBP9.05□□□□□ -0.96
ATXN3-232ENST00000555381 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-232ENST00000555381 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-232ENST00000555381 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
ATXN3-232ENST00000555381 PAXIP1Q6ZW49 1069 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-232ENST00000555381 SPRYD3Q8NCJ5 442 aa9.03□□□□□ -0.96
ATXN3-232ENST00000555381 OXER1Q8TDS5 423 aa9.02□□□□□ -0.97
ATXN3-232ENST00000555381 VPS9D1Q9Y2B5 631 aa9.02□□□□□ -0.97
ATXN3-232ENST00000555381 IFFO2Q5TF58 517 aa9.01□□□□□ -0.97
ATXN3-232ENST00000555381 ZNF454Q8N9F8 522 aa9.01□□□□□ -0.97
ATXN3-232ENST00000555381 CFAP44Q96MT7 982 aa9□□□□□ -0.97
ATXN3-232ENST00000555381 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
ATXN3-232ENST00000555381 PPP1R15BQ5SWA1 713 aa8.99□□□□□ -0.97
ATXN3-232ENST00000555381 CRISPLD2Q9H0B8 497 aa8.99□□□□□ -0.97
ATXN3-232ENST00000555381 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
ATXN3-232ENST00000555381 SOGA1O94964 1423 aa8.98□□□□□ -0.97
ATXN3-232ENST00000555381 A0A0G2JS52 829 aa8.98□□□□□ -0.97
ATXN3-232ENST00000555381 DNMBPQ6XZF7 1577 aa8.97□□□□□ -0.97
ATXN3-232ENST00000555381 THSD4Q6ZMP0 1018 aa8.96□□□□□ -0.98
ATXN3-232ENST00000555381 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-232ENST00000555381 RAD54L2Q9Y4B4 1467 aa8.95□□□□□ -0.98
ATXN3-232ENST00000555381 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
ATXN3-232ENST00000555381 PDE4AP27815 886 aa8.94□□□□□ -0.98
ATXN3-232ENST00000555381 CADPS2Q86UW7 1296 aa8.94□□□□□ -0.98
ATXN3-232ENST00000555381 BCL2L12Q9HB09 334 aa8.94□□□□□ -0.98
ATXN3-232ENST00000555381 NCKAP5LQ9HCH0 1330 aa8.94□□□□□ -0.98
ATXN3-232ENST00000555381 PTPREP23469 700 aa8.93□□□□□ -0.98
ATXN3-232ENST00000555381 FOSBP53539 338 aa8.93□□□□□ -0.98
ATXN3-232ENST00000555381 PLCB2Q00722 1185 aa8.93□□□□□ -0.98
ATXN3-232ENST00000555381 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
ATXN3-232ENST00000555381 WNT2BQ93097 391 aa8.92□□□□□ -0.98
ATXN3-232ENST00000555381 SLC4A5Q9BY07 1137 aa8.92□□□□□ -0.98
ATXN3-232ENST00000555381 GOLGA8CPA6NN73 597 aa8.91□□□□□ -0.98
ATXN3-232ENST00000555381 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-232ENST00000555381 EVI5O60447 810 aa8.91□□□□□ -0.98
ATXN3-232ENST00000555381 CHD1O14646 1710 aa8.91□□□□□ -0.98
ATXN3-232ENST00000555381 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-232ENST00000555381 JPH4Q96JJ6 628 aa8.9□□□□□ -0.98
ATXN3-232ENST00000555381 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
ATXN3-232ENST00000555381 CLASP1Q7Z460 1538 aa8.9□□□□□ -0.99
ATXN3-232ENST00000555381 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
ATXN3-232ENST00000555381 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
ATXN3-232ENST00000555381 TSHZ2Q9NRE2 1034 aa8.89□□□□□ -0.99
ATXN3-232ENST00000555381 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
ATXN3-232ENST00000555381 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
ATXN3-232ENST00000555381 Q6ZNB5 142 aa8.88□□□□□ -0.99
ATXN3-232ENST00000555381 MRPL50Q8N5N7 158 aaKnown RBP8.88□□□□□ -0.99
ATXN3-232ENST00000555381 ZDHHC16Q969W1 377 aa8.88□□□□□ -0.99
ATXN3-232ENST00000555381 DDX27Q96GQ7 796 aaKnown RBP8.88□□□□□ -0.99
ATXN3-232ENST00000555381 ZBED2Q9BTP6 218 aa8.88□□□□□ -0.99
ATXN3-232ENST00000555381 ANO8Q9HCE9 1232 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-232ENST00000555381 PRDM2Q13029 1718 aa8.88□□□□□ -0.99
ATXN3-232ENST00000555381 ADAM33Q9BZ11 813 aa8.87□□□□□ -0.99
ATXN3-232ENST00000555381 FGD5Q6ZNL6 1462 aa8.86□□□□□ -0.99
ATXN3-232ENST00000555381 MAP3K9P80192 1104 aa8.86□□□□□ -0.99
ATXN3-232ENST00000555381 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
ATXN3-232ENST00000555381 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
ATXN3-232ENST00000555381 MFSD10Q14728 455 aa8.82□□□□□ -1
ATXN3-232ENST00000555381 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
ATXN3-232ENST00000555381 PPP1R3GB7ZBB8 358 aa8.79□□□□□ -1
ATXN3-232ENST00000555381 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ATXN3-232ENST00000555381 PCDHGA10Q9Y5H3 936 aa8.79□□□□□ -1
ATXN3-232ENST00000555381 CUX1P39880 1505 aa8.79□□□□□ -1
ATXN3-232ENST00000555381 PROX2Q3B8N5 592 aa8.78□□□□□ -1
ATXN3-232ENST00000555381 LCE2BO14633 110 aa8.77□□□□□ -1.01
ATXN3-232ENST00000555381 ITGBL1O95965 494 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-232ENST00000555381 COL9A1P20849 921 aa8.77□□□□□ -1.01
ATXN3-232ENST00000555381 ABCA10Q8WWZ4 1543 aa8.76□□□□□ -1.01
ATXN3-232ENST00000555381 BCAMP50895 628 aa8.76□□□□□ -1.01
ATXN3-232ENST00000555381 HAP1P54257 671 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-232ENST00000555381 TYW1BQ6NUM6 668 aa8.76□□□□□ -1.01
ATXN3-232ENST00000555381 ANKK1Q8NFD2 765 aa8.76□□□□□ -1.01
ATXN3-232ENST00000555381 RABGEF1Q9UJ41 708 aa8.76□□□□□ -1.01
ATXN3-232ENST00000555381 NUP160Q12769 1436 aa8.76□□□□□ -1.01
ATXN3-232ENST00000555381 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
ATXN3-232ENST00000555381 GRIN2AQ12879 1464 aa8.75□□□□□ -1.01
ATXN3-232ENST00000555381 ERCC6L2Q5T890 1561 aa8.74□□□□□ -1.01
ATXN3-232ENST00000555381 PHF14O94880 888 aa8.74□□□□□ -1.01
ATXN3-232ENST00000555381 FHAD1B1AJZ9 1412 aa8.72□□□□□ -1.01
ATXN3-232ENST00000555381 WRNQ14191 1432 aaPredicted RBP eCLIP8.72□□□□□ -1.01
ATXN3-232ENST00000555381 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-232ENST00000555381 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms