RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
PRKCH-205ENST00000553726 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
PRKCH-205ENST00000553726 EMILIN3Q9NT22 766 aa12.88□□□□□ -0.35
PRKCH-205ENST00000553726 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
PRKCH-205ENST00000553726 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
PRKCH-205ENST00000553726 ANO8Q9HCE9 1232 aaPredicted RBP12.87□□□□□ -0.35
PRKCH-205ENST00000553726 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
PRKCH-205ENST00000553726 ARHGAP33O14559 1287 aa12.86□□□□□ -0.35
PRKCH-205ENST00000553726 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
PRKCH-205ENST00000553726 EVI5O60447 810 aa12.85□□□□□ -0.35
PRKCH-205ENST00000553726 CAMK2BQ13554 666 aa12.83□□□□□ -0.36
PRKCH-205ENST00000553726 PTGER2P43116 358 aa12.82□□□□□ -0.36
PRKCH-205ENST00000553726 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
PRKCH-205ENST00000553726 ZNF454Q8N9F8 522 aa12.81□□□□□ -0.36
PRKCH-205ENST00000553726 FOSBP53539 338 aa12.8□□□□□ -0.36
PRKCH-205ENST00000553726 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
PRKCH-205ENST00000553726 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
PRKCH-205ENST00000553726 PSEN2P49810 448 aa12.78□□□□□ -0.36
PRKCH-205ENST00000553726 JPH4Q96JJ6 628 aa12.77□□□□□ -0.37
PRKCH-205ENST00000553726 RNF166Q96A37 237 aaPredicted RBP12.76□□□□□ -0.37
PRKCH-205ENST00000553726 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
PRKCH-205ENST00000553726 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
PRKCH-205ENST00000553726 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
PRKCH-205ENST00000553726 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
PRKCH-205ENST00000553726 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
PRKCH-205ENST00000553726 KCNK17Q96T54 332 aa12.74□□□□□ -0.37
PRKCH-205ENST00000553726 TK2O00142 265 aa12.73□□□□□ -0.37
PRKCH-205ENST00000553726 DPYSL4O14531 572 aa12.73□□□□□ -0.37
PRKCH-205ENST00000553726 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
PRKCH-205ENST00000553726 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
PRKCH-205ENST00000553726 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
PRKCH-205ENST00000553726 ZNF608Q9ULD9 1512 aaPredicted RBP12.7□□□□□ -0.38
PRKCH-205ENST00000553726 E2F4Q16254 413 aa12.69□□□□□ -0.38
PRKCH-205ENST00000553726 PTPREP23469 700 aa12.68□□□□□ -0.38
PRKCH-205ENST00000553726 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
PRKCH-205ENST00000553726 PCDHGA10Q9Y5H3 936 aa12.68□□□□□ -0.38
PRKCH-205ENST00000553726 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
PRKCH-205ENST00000553726 HRO43593 1189 aa12.66□□□□□ -0.38
PRKCH-205ENST00000553726 PHF14O94880 888 aa12.66□□□□□ -0.38
PRKCH-205ENST00000553726 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
PRKCH-205ENST00000553726 TARBP1Q13395 1621 aaKnown RBP12.64□□□□□ -0.39
PRKCH-205ENST00000553726 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
PRKCH-205ENST00000553726 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
PRKCH-205ENST00000553726 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
PRKCH-205ENST00000553726 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
PRKCH-205ENST00000553726 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
PRKCH-205ENST00000553726 SLC4A5Q9BY07 1137 aa12.63□□□□□ -0.39
PRKCH-205ENST00000553726 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
PRKCH-205ENST00000553726 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
PRKCH-205ENST00000553726 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-205ENST00000553726 SPDYE16A6NNV3 312 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-205ENST00000553726 PDIA6Q15084 440 aa12.61□□□□□ -0.39
PRKCH-205ENST00000553726 EPAS1Q99814 870 aa12.61□□□□□ -0.39
PRKCH-205ENST00000553726 AQRO60306 1485 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRKCH-205ENST00000553726 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
PRKCH-205ENST00000553726 SOGA1O94964 1423 aa12.6□□□□□ -0.39
PRKCH-205ENST00000553726 ARHGEF11O15085 1522 aa12.59□□□□□ -0.39
PRKCH-205ENST00000553726 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
PRKCH-205ENST00000553726 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
PRKCH-205ENST00000553726 DDX12PQ92771 950 aa12.58□□□□□ -0.4
PRKCH-205ENST00000553726 CHD1O14646 1710 aa12.57□□□□□ -0.4
PRKCH-205ENST00000553726 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
PRKCH-205ENST00000553726 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
PRKCH-205ENST00000553726 TDRD9Q8NDG6 1382 aaKnown RBP12.54□□□□□ -0.4
PRKCH-205ENST00000553726 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
PRKCH-205ENST00000553726 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-205ENST00000553726 COL9A1P20849 921 aa12.53□□□□□ -0.4
PRKCH-205ENST00000553726 C6orf132Q5T0Z8 1188 aa12.53□□□□□ -0.4
PRKCH-205ENST00000553726 CYB5RLQ6IPT4 315 aa12.52□□□□□ -0.41
PRKCH-205ENST00000553726 NBR1Q14596 966 aa12.51□□□□□ -0.41
PRKCH-205ENST00000553726 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
PRKCH-205ENST00000553726 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
PRKCH-205ENST00000553726 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
PRKCH-205ENST00000553726 CUX1P39880 1505 aa12.5□□□□□ -0.41
PRKCH-205ENST00000553726 MAGI1Q96QZ7 1491 aaPredicted RBP12.49□□□□□ -0.41
PRKCH-205ENST00000553726 HCSTQ9UBK5 93 aa12.49□□□□□ -0.41
PRKCH-205ENST00000553726 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
PRKCH-205ENST00000553726 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
PRKCH-205ENST00000553726 PROX2Q3B8N5 592 aa12.48□□□□□ -0.41
PRKCH-205ENST00000553726 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
PRKCH-205ENST00000553726 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
PRKCH-205ENST00000553726 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
PRKCH-205ENST00000553726 NBPF3Q9H094 633 aa12.47□□□□□ -0.41
PRKCH-205ENST00000553726 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
PRKCH-205ENST00000553726 GRXCR2A6NFK2 248 aa12.45□□□□□ -0.42
PRKCH-205ENST00000553726 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
PRKCH-205ENST00000553726 MAP3K7O43318 606 aa12.45□□□□□ -0.42
PRKCH-205ENST00000553726 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
PRKCH-205ENST00000553726 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
PRKCH-205ENST00000553726 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
PRKCH-205ENST00000553726 ARAP1Q96P48 1450 aa12.44□□□□□ -0.42
PRKCH-205ENST00000553726 GAPVD1Q14C86 1478 aa12.43□□□□□ -0.42
PRKCH-205ENST00000553726 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
PRKCH-205ENST00000553726 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-205ENST00000553726 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
PRKCH-205ENST00000553726 TSR1Q2NL82 804 aaKnown RBP12.42□□□□□ -0.42
PRKCH-205ENST00000553726 KCNV2Q8TDN2 545 aa12.42□□□□□ -0.42
PRKCH-205ENST00000553726 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
PRKCH-205ENST00000553726 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
PRKCH-205ENST00000553726 KIAA1468Q9P260 1216 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms