RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
PRKCH-205ENST00000553726 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
PRKCH-205ENST00000553726 SENP3Q9H4L4 574 aaPredicted RBP25.47■■□□□ 1.67
PRKCH-205ENST00000553726 PHF23Q9BUL5 403 aaPredicted RBP25.22■■□□□ 1.63
PRKCH-205ENST00000553726 FOXD1Q16676 465 aa23.68■■□□□ 1.38
PRKCH-205ENST00000553726 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
PRKCH-205ENST00000553726 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
PRKCH-205ENST00000553726 ADRA2BP18089 450 aa22.36■■□□□ 1.17
PRKCH-205ENST00000553726 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
PRKCH-205ENST00000553726 MSH5O43196 834 aa22.05■■□□□ 1.12
PRKCH-205ENST00000553726 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
PRKCH-205ENST00000553726 SCAF1Q9H7N4 1312 aaKnown RBP20.5■□□□□ 0.87
PRKCH-205ENST00000553726 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
PRKCH-205ENST00000553726 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
PRKCH-205ENST00000553726 DMRT2Q9Y5R5 561 aa20.25■□□□□ 0.83
PRKCH-205ENST00000553726 CNKSR2Q8WXI2 1034 aa19.87■□□□□ 0.77
PRKCH-205ENST00000553726 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
PRKCH-205ENST00000553726 HOXD11P31277 338 aaPredicted RBP19.65■□□□□ 0.74
PRKCH-205ENST00000553726 RNF216Q9NWF9 866 aaPredicted RBP19.6■□□□□ 0.73
PRKCH-205ENST00000553726 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
PRKCH-205ENST00000553726 NPM3O75607 178 aaKnown RBP19.36■□□□□ 0.69
PRKCH-205ENST00000553726 KCNA4P22459 653 aa19.29■□□□□ 0.68
PRKCH-205ENST00000553726 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
PRKCH-205ENST00000553726 RNF39Q9H2S5 420 aa18.84■□□□□ 0.61
PRKCH-205ENST00000553726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.59
PRKCH-205ENST00000553726 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
PRKCH-205ENST00000553726 C1QBPQ07021 282 aaKnown RBP18.6■□□□□ 0.57
PRKCH-205ENST00000553726 SLC4A2P04920 1241 aa18.39■□□□□ 0.53
PRKCH-205ENST00000553726 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
PRKCH-205ENST00000553726 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
PRKCH-205ENST00000553726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
PRKCH-205ENST00000553726 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
PRKCH-205ENST00000553726 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
PRKCH-205ENST00000553726 CAPN15O75808 1086 aa17.94■□□□□ 0.46
PRKCH-205ENST00000553726 APLP2Q06481 763 aa17.91■□□□□ 0.46
PRKCH-205ENST00000553726 MYCNP04198 464 aaPredicted RBP17.9■□□□□ 0.46
PRKCH-205ENST00000553726 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
PRKCH-205ENST00000553726 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
PRKCH-205ENST00000553726 DSG3P32926 999 aa17.75■□□□□ 0.43
PRKCH-205ENST00000553726 ZBTB22O15209 634 aa17.73■□□□□ 0.43
PRKCH-205ENST00000553726 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
PRKCH-205ENST00000553726 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
PRKCH-205ENST00000553726 ABCB7O75027 752 aa17.54■□□□□ 0.4
PRKCH-205ENST00000553726 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
PRKCH-205ENST00000553726 ATXN8OSP0DMR3 200 aa17.35■□□□□ 0.37
PRKCH-205ENST00000553726 POLA2Q14181 598 aa17.35■□□□□ 0.37
PRKCH-205ENST00000553726 NISCHQ9Y2I1 1504 aa17.31■□□□□ 0.36
PRKCH-205ENST00000553726 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
PRKCH-205ENST00000553726 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
PRKCH-205ENST00000553726 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
PRKCH-205ENST00000553726 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
PRKCH-205ENST00000553726 FBLN2P98095 1184 aa16.77■□□□□ 0.28
PRKCH-205ENST00000553726 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
PRKCH-205ENST00000553726 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
PRKCH-205ENST00000553726 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
PRKCH-205ENST00000553726 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
PRKCH-205ENST00000553726 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
PRKCH-205ENST00000553726 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
PRKCH-205ENST00000553726 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
PRKCH-205ENST00000553726 POTEHQ6S545 545 aa16.46■□□□□ 0.23
PRKCH-205ENST00000553726 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
PRKCH-205ENST00000553726 ZNF692Q9BU19 519 aaPredicted RBP16.4■□□□□ 0.22
PRKCH-205ENST00000553726 SSUH2Q9Y2M2 353 aa16.35■□□□□ 0.21
PRKCH-205ENST00000553726 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
PRKCH-205ENST00000553726 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
PRKCH-205ENST00000553726 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRKCH-205ENST00000553726 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
PRKCH-205ENST00000553726 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
PRKCH-205ENST00000553726 FXR2P51116 673 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRKCH-205ENST00000553726 SPDYE4A6NLX3 237 aa16.07■□□□□ 0.16
PRKCH-205ENST00000553726 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
PRKCH-205ENST00000553726 PRKAR2AP13861 404 aaKnown RBP15.86■□□□□ 0.13
PRKCH-205ENST00000553726 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
PRKCH-205ENST00000553726 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
PRKCH-205ENST00000553726 PROM2Q8N271 834 aa15.75■□□□□ 0.11
PRKCH-205ENST00000553726 HAX1O00165 279 aa15.73■□□□□ 0.11
PRKCH-205ENST00000553726 FKBP8Q14318 412 aa15.62■□□□□ 0.09
PRKCH-205ENST00000553726 SP7Q8TDD2 431 aaPredicted RBP15.59■□□□□ 0.09
PRKCH-205ENST00000553726 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.09
PRKCH-205ENST00000553726 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
PRKCH-205ENST00000553726 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
PRKCH-205ENST00000553726 C19orf67A6NJJ6 358 aa15.55■□□□□ 0.08
PRKCH-205ENST00000553726 EVX2Q03828 476 aa15.54■□□□□ 0.08
PRKCH-205ENST00000553726 ABCC9O60706 1549 aa15.52■□□□□ 0.07
PRKCH-205ENST00000553726 CD44P16070 742 aaKnown RBP15.38■□□□□ 0.05
PRKCH-205ENST00000553726 MNX1P50219 401 aaPredicted RBP15.36■□□□□ 0.05
PRKCH-205ENST00000553726 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
PRKCH-205ENST00000553726 MIER1Q8N108 512 aa15.3■□□□□ 0.04
PRKCH-205ENST00000553726 PLEKHG5O94827 1062 aa15.27■□□□□ 0.04
PRKCH-205ENST00000553726 GABBR2O75899 941 aa15.23■□□□□ 0.03
PRKCH-205ENST00000553726 ZRANB1Q9UGI0 708 aa15.23■□□□□ 0.03
PRKCH-205ENST00000553726 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
PRKCH-205ENST00000553726 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
PRKCH-205ENST00000553726 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
PRKCH-205ENST00000553726 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
PRKCH-205ENST00000553726 CLCN6P51797 869 aa15.15■□□□□ 0.02
PRKCH-205ENST00000553726 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
PRKCH-205ENST00000553726 TSPYL2Q9H2G4 693 aaPredicted RBP15.04■□□□□ -0
PRKCH-205ENST00000553726 PHF12Q96QT6 1004 aa15.02■□□□□ -0
PRKCH-205ENST00000553726 VASPP50552 380 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms